| MUC1 | P15941 | AL590399.1-203 | ENST00000412631 | 256 nt | TSL 5 BASIC | 1.14 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AC009310.1-201 | ENST00000414414 | 451 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AC015922.2-201 | ENST00000435593 | 184 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AC098614.3-201 | ENST00000438957 | 440 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AC009474.2-201 | ENST00000451383 | 136 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| MUC1 | P15941 | ATP5J2P3-201 | ENST00000451550 | 258 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| MUC1 | P15941 | RNU6-498P-201 | ENST00000459468 | 107 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| MUC1 | P15941 | RNU7-57P-201 | ENST00000459540 | 60 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AC091179.3-201 | ENST00000474761 | 144 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| MUC1 | P15941 | RNU6-120P-201 | ENST00000516077 | 103 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| MUC1 | P15941 | SCARNA16.2-201 | ENST00000516520 | 172 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| MUC1 | P15941 | RNU6-1198P-201 | ENST00000516904 | 67 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| MUC1 | P15941 | SUMO2P18-201 | ENST00000518873 | 252 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AC134698.4-201 | ENST00000523451 | 826 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AC068338.1-201 | ENST00000565567 | 176 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| MUC1 | P15941 | MZT1P2-201 | ENST00000604387 | 248 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AC010900.2-201 | ENST00000604508 | 210 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AL355073.2-201 | ENST00000612106 | 557 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| MUC1 | P15941 | Hammerhead_HH9.1-201 | ENST00000616606 | 77 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| MUC1 | P15941 | Metazoa_SRP.32-201 | ENST00000622685 | 286 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AC008873.1-201 | ENST00000625051 | 138 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| MUC1 | P15941 | CYLC2-204 | ENST00000612124 | 1817 nt | APPRIS P1 TSL 1 (best) BASIC | 1.14 | □□□□□ -2.23 | | |
| MUC1 | P15941 | MIR378A-201 | ENST00000362177 | 66 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MUC1 | P15941 | RNY1P16-201 | ENST00000363063 | 111 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MUC1 | P15941 | Y_RNA.303-201 | ENST00000364998 | 94 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MUC1 | P15941 | Y_RNA.415-201 | ENST00000384012 | 112 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MUC1 | P15941 | Y_RNA.474-201 | ENST00000384341 | 102 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MUC1 | P15941 | MIR320B2-201 | ENST00000408479 | 138 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MUC1 | P15941 | RNU6-57P-201 | ENST00000411348 | 103 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MUC1 | P15941 | USMG5P1-201 | ENST00000425964 | 177 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MUC1 | P15941 | SPAG11B-206 | ENST00000458665 | 444 nt | TSL 5 BASIC | 1.13 | □□□□□ -2.23 | | |
| MUC1 | P15941 | U8.22-201 | ENST00000459141 | 133 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MUC1 | P15941 | RNU7-95P-201 | ENST00000459222 | 64 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AC116353.2-201 | ENST00000505332 | 712 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AC011406.1-201 | ENST00000512440 | 370 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MUC1 | P15941 | RNU6-948P-201 | ENST00000516374 | 107 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MUC1 | P15941 | LINC02425-201 | ENST00000536217 | 376 nt | TSL 3 BASIC | 1.13 | □□□□□ -2.23 | | |
| MUC1 | P15941 | MIR4421-201 | ENST00000578133 | 69 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MUC1 | P15941 | MIR5695-201 | ENST00000579717 | 85 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AC103810.8-201 | ENST00000607347 | 118 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MUC1 | P15941 | SNORD11B-201 | ENST00000607707 | 90 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MUC1 | P15941 | WT1-AS_8.1-201 | ENST00000615200 | 275 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AC126177.8-201 | ENST00000618339 | 1015 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AL078596.1-201 | ENST00000624856 | 447 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AC099654.5-201 | ENST00000636479 | 350 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MUC1 | P15941 | RBMS2-209 | ENST00000639027 | 192 nt | TSL 5 BASIC | 1.13 | □□□□□ -2.23 | | |
| MUC1 | P15941 | BCL2L11-225 | ENST00000640419 | 249 nt | APPRIS ALT2 TSL 5 BASIC | 1.13 | □□□□□ -2.23 | | |
| MUC1 | P15941 | MTND5P16-201 | ENST00000460269 | 1703 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | RNU6-112P-201 | ENST00000363599 | 104 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | SNORA33-201 | ENST00000363664 | 130 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | RNU6-280P-201 | ENST00000364145 | 104 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | RNU6-439P-201 | ENST00000384188 | 106 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | RNU6-281P-201 | ENST00000384212 | 103 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | RNU6ATAC2P-201 | ENST00000387943 | 126 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | MIR758-201 | ENST00000390227 | 88 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | MIR190B-201 | ENST00000401119 | 79 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AC016909.1-201 | ENST00000415916 | 166 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AL136985.1-201 | ENST00000424592 | 395 nt | TSL 3 BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AC245047.4-201 | ENST00000433189 | 144 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AC114982.1-201 | ENST00000469402 | 321 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | LINC02491-201 | ENST00000504710 | 403 nt | TSL 2 BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AC096721.1-201 | ENST00000513540 | 552 nt | TSL 4 BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | RNA5SP458-201 | ENST00000516188 | 119 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | RNU2-34P-201 | ENST00000516534 | 121 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | Y_RNA.706-201 | ENST00000516933 | 99 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | SNORA31.17-201 | ENST00000516953 | 127 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AC105029.1-201 | ENST00000520250 | 669 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | SNHG14-219 | ENST00000553134 | 470 nt | TSL 2 BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | SUB1P3-201 | ENST00000564581 | 315 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | hsa-mir-3119-1.1-201 | ENST00000577602 | 85 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AC005730.3-201 | ENST00000583067 | 366 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AL161716.1-201 | ENST00000606365 | 273 nt | TSL 5 BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AC100812.1-201 | ENST00000607622 | 580 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | PISRT1.1-201 | ENST00000616930 | 107 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AC006001.4-201 | ENST00000622243 | 395 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AL359697.1-201 | ENST00000624879 | 587 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | MIR338-201 | ENST00000636369 | 67 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AC068205.3-201 | ENST00000636385 | 468 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AL669831.3-213 | ENST00000636676 | 183 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | GS1-279B7.1-204 | ENST00000641809 | 378 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AC091812.1-201 | ENST00000432235 | 1948 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| MUC1 | P15941 | SKIL-202 | ENST00000413427 | 2702 nt | TSL 1 (best) BASIC | 1.11 | □□□□□ -2.23 | | |
| MUC1 | P15941 | PPP1R3A-201 | ENST00000284601 | 4384 nt | APPRIS P1 TSL 1 (best) BASIC | 1.11 | □□□□□ -2.23 | | |
| MUC1 | P15941 | Y_RNA.140-201 | ENST00000363474 | 103 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| MUC1 | P15941 | SNORA7.1-201 | ENST00000363750 | 139 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| MUC1 | P15941 | RNU1-96P-201 | ENST00000364163 | 162 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| MUC1 | P15941 | Y_RNA.287-201 | ENST00000364853 | 94 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| MUC1 | P15941 | RNU6-793P-201 | ENST00000384233 | 104 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| MUC1 | P15941 | RNU6-296P-201 | ENST00000384608 | 107 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| MUC1 | P15941 | TRAJ23-201 | ENST00000390514 | 63 nt | APPRIS P1 BASIC | 1.11 | □□□□□ -2.23 | | |
| MUC1 | P15941 | RNU1-139P-201 | ENST00000391307 | 165 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| MUC1 | P15941 | ZNF468-202 | ENST00000396409 | 384 nt | TSL 5 BASIC | 1.11 | □□□□□ -2.23 | | |
| MUC1 | P15941 | Y_RNA.646-201 | ENST00000410980 | 101 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| MUC1 | P15941 | RNU6-370P-201 | ENST00000411008 | 104 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AP1B1P2-201 | ENST00000416196 | 106 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| MUC1 | P15941 | BTF3P4-201 | ENST00000418852 | 495 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| MUC1 | P15941 | NCOR1P3-201 | ENST00000420479 | 303 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| MUC1 | P15941 | AL356010.2-201 | ENST00000422844 | 197 nt | TSL 3 BASIC | 1.11 | □□□□□ -2.23 | | |
| MUC1 | P15941 | USP9YP16-201 | ENST00000430287 | 407 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| MUC1 | P15941 | FAR2P3-204 | ENST00000434661 | 444 nt | TSL 2 BASIC | 1.11 | □□□□□ -2.23 | | |