Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 RNU6-1249P-201ENST00000363237 111 ntBASIC-1.66□□□□□ -2.67
VCANP13611 MIR5706-201ENST00000579841 80 ntBASIC-1.66□□□□□ -2.67
VCANP13611 AC133485.4-201ENST00000561835 220 ntBASIC-1.66□□□□□ -2.68
VCANP13611 RNU6-31P-201ENST00000384388 108 ntBASIC-1.67□□□□□ -2.68
VCANP13611 RNU4-61P-201ENST00000411243 107 ntBASIC-1.67□□□□□ -2.68
VCANP13611 AC008267.5-201ENST00000424928 265 ntBASIC-1.67□□□□□ -2.68
VCANP13611 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC-1.67□□□□□ -2.68
VCANP13611 AP002001.1-203ENST00000534002 267 ntBASIC-1.67□□□□□ -2.68
VCANP13611 BNIP3P24-201ENST00000593398 557 ntBASIC-1.67□□□□□ -2.68
VCANP13611 MIR7107-201ENST00000611489 80 ntBASIC-1.67□□□□□ -2.68
VCANP13611 RNA5SP258-201ENST00000362750 119 ntBASIC-1.67□□□□□ -2.68
VCANP13611 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC-1.67□□□□□ -2.68
VCANP13611 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-1.67□□□□□ -2.68
VCANP13611 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.67□□□□□ -2.68
VCANP13611 U8.16-201ENST00000391279 133 ntBASIC-1.67□□□□□ -2.68
VCANP13611 MIR1290-201ENST00000408735 78 ntBASIC-1.67□□□□□ -2.68
VCANP13611 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.67□□□□□ -2.68
VCANP13611 SNORD19.2-201ENST00000516978 73 ntBASIC-1.67□□□□□ -2.68
VCANP13611 AP000484.1-201ENST00000620067 1252 ntBASIC-1.67□□□□□ -2.68
VCANP13611 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.68□□□□□ -2.68
VCANP13611 MIR876-201ENST00000401147 81 ntBASIC-1.68□□□□□ -2.68
VCANP13611 RNU7-34P-201ENST00000459394 64 ntBASIC-1.68□□□□□ -2.68
VCANP13611 AC093012.1-202ENST00000549403 582 ntBASIC-1.68□□□□□ -2.68
VCANP13611 SNORD114-6-201ENST00000364393 72 ntBASIC-1.68□□□□□ -2.68
VCANP13611 AL355143.1-201ENST00000407101 841 ntBASIC-1.68□□□□□ -2.68
VCANP13611 BTF3P15-201ENST00000455606 336 ntBASIC-1.68□□□□□ -2.68
VCANP13611 AC078795.3-201ENST00000602913 472 ntBASIC-1.68□□□□□ -2.68
VCANP13611 AC122133.1-201ENST00000613964 233 ntBASIC-1.68□□□□□ -2.68
VCANP13611 TXNL1P1-201ENST00000429528 554 ntBASIC-1.68□□□□□ -2.68
VCANP13611 AC079395.1-201ENST00000510981 262 ntBASIC-1.68□□□□□ -2.68
VCANP13611 RNU4-21P-201ENST00000362802 126 ntBASIC-1.69□□□□□ -2.68
VCANP13611 RNU6-179P-201ENST00000363350 107 ntBASIC-1.69□□□□□ -2.68
VCANP13611 AL590135.1-201ENST00000422215 156 ntBASIC-1.69□□□□□ -2.68
VCANP13611 AC019205.3-201ENST00000424573 156 ntBASIC-1.69□□□□□ -2.68
VCANP13611 MTCO2P1-201ENST00000424648 477 ntBASIC-1.69□□□□□ -2.68
VCANP13611 AC016700.2-201ENST00000446011 156 ntBASIC-1.69□□□□□ -2.68
VCANP13611 AC015911.1-201ENST00000495111 156 ntBASIC-1.69□□□□□ -2.68
VCANP13611 SNORD60.2-201ENST00000516883 86 ntBASIC-1.69□□□□□ -2.68
VCANP13611 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.69□□□□□ -2.68
VCANP13611 MIR653-201ENST00000385279 96 ntBASIC-1.69□□□□□ -2.68
VCANP13611 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-1.69□□□□□ -2.68
VCANP13611 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC-1.69□□□□□ -2.68
VCANP13611 SNORA25.11-201ENST00000515935 105 ntBASIC-1.69□□□□□ -2.68
VCANP13611 AL359547.2-201ENST00000615810 418 ntBASIC-1.69□□□□□ -2.68
VCANP13611 SNORD100-201ENST00000408573 76 ntBASIC-1.7□□□□□ -2.68
VCANP13611 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC-1.7□□□□□ -2.68
VCANP13611 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.7□□□□□ -2.68
VCANP13611 U7.6-201ENST00000610841 64 ntBASIC-1.7□□□□□ -2.68
VCANP13611 RNY4P9-201ENST00000363194 97 ntBASIC-1.7□□□□□ -2.68
VCANP13611 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-1.7□□□□□ -2.68
VCANP13611 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-1.7□□□□□ -2.68
VCANP13611 AL451064.1-201ENST00000607718 471 ntBASIC-1.7□□□□□ -2.68
VCANP13611 SNORD38B-202ENST00000625943 69 ntBASIC-1.7□□□□□ -2.68
VCANP13611 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-1.7□□□□□ -2.68
VCANP13611 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.7□□□□□ -2.68
VCANP13611 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.7□□□□□ -2.68
VCANP13611 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.7□□□□□ -2.68
VCANP13611 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-1.7□□□□□ -2.68
VCANP13611 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC-1.7□□□□□ -2.68
VCANP13611 SNORA4.2-201ENST00000365313 147 ntBASIC-1.71□□□□□ -2.68
VCANP13611 MIR181B2-201ENST00000385004 89 ntBASIC-1.71□□□□□ -2.68
VCANP13611 FAM204CP-201ENST00000424489 642 ntBASIC-1.71□□□□□ -2.68
VCANP13611 snoU13.30-201ENST00000458951 104 ntBASIC-1.71□□□□□ -2.68
VCANP13611 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-1.71□□□□□ -2.68
VCANP13611 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC-1.71□□□□□ -2.68
VCANP13611 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-1.71□□□□□ -2.68
VCANP13611 RNA5SP56-201ENST00000410277 118 ntBASIC-1.71□□□□□ -2.68
VCANP13611 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-1.71□□□□□ -2.68
VCANP13611 AP001429.1-201ENST00000602568 530 ntBASIC-1.71□□□□□ -2.68
VCANP13611 RNY1P2-201ENST00000364820 117 ntBASIC-1.72□□□□□ -2.68
VCANP13611 MTND3P8-201ENST00000412909 339 ntBASIC-1.72□□□□□ -2.68
VCANP13611 AC010587.1-201ENST00000505809 469 ntBASIC-1.72□□□□□ -2.68
VCANP13611 PRDX4P1-201ENST00000507189 574 ntBASIC-1.72□□□□□ -2.68
VCANP13611 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-1.72□□□□□ -2.68
VCANP13611 MIR3921-201ENST00000577308 85 ntBASIC-1.72□□□□□ -2.68
VCANP13611 MIR487B-201ENST00000385021 84 ntBASIC-1.72□□□□□ -2.68
VCANP13611 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.72□□□□□ -2.68
VCANP13611 TAAR7P-201ENST00000436141 242 ntBASIC-1.72□□□□□ -2.68
VCANP13611 AC112771.1-201ENST00000463581 102 ntBASIC-1.72□□□□□ -2.68
VCANP13611 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC-1.72□□□□□ -2.68
VCANP13611 AC008752.3-201ENST00000588113 712 ntBASIC-1.72□□□□□ -2.68
VCANP13611 AC245014.2-201ENST00000603689 287 ntBASIC-1.72□□□□□ -2.68
VCANP13611 AL359999.1-201ENST00000604513 294 ntBASIC-1.72□□□□□ -2.68
VCANP13611 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-1.72□□□□□ -2.69
VCANP13611 SNORD113-7-201ENST00000363762 77 ntBASIC-1.73□□□□□ -2.69
VCANP13611 RNU6-588P-201ENST00000410281 105 ntBASIC-1.73□□□□□ -2.69
VCANP13611 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-1.73□□□□□ -2.69
VCANP13611 AC091163.3-201ENST00000518269 1144 ntBASIC-1.73□□□□□ -2.69
VCANP13611 AC068587.4-201ENST00000533893 186 ntBASIC-1.73□□□□□ -2.69
VCANP13611 MIR4804-201ENST00000581683 73 ntBASIC-1.73□□□□□ -2.69
VCANP13611 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.73□□□□□ -2.69
VCANP13611 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.73□□□□□ -2.69
VCANP13611 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.73□□□□□ -2.69
VCANP13611 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.73□□□□□ -2.69
VCANP13611 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.73□□□□□ -2.69
VCANP13611 SNORD115-12-201ENST00000362583 82 ntBASIC-1.73□□□□□ -2.69
VCANP13611 SNORD115-9-201ENST00000362912 82 ntBASIC-1.73□□□□□ -2.69
VCANP13611 SNORD115-19-201ENST00000363098 82 ntBASIC-1.73□□□□□ -2.69
VCANP13611 SNORD115-18-201ENST00000363293 82 ntBASIC-1.73□□□□□ -2.69
VCANP13611 SNORD115-17-201ENST00000364612 82 ntBASIC-1.73□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms