Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AC069114.2-201ENST00000604699 304 ntBASIC1.99□□□□□ -2.09
UBL4AP11441 AL133255.1-201ENST00000606374 441 ntBASIC1.99□□□□□ -2.09
UBL4AP11441 AL357075.2-201ENST00000614906 189 ntBASIC1.99□□□□□ -2.09
UBL4AP11441 U2.1-201ENST00000618978 145 ntBASIC1.99□□□□□ -2.09
UBL4AP11441 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
UBL4AP11441 MTND5P6-201ENST00000422338 1798 ntBASIC1.98□□□□□ -2.09
UBL4AP11441 RNY3P11-201ENST00000364153 102 ntBASIC1.98□□□□□ -2.09
UBL4AP11441 RNU6-417P-201ENST00000384712 107 ntBASIC1.98□□□□□ -2.09
UBL4AP11441 MIR515-2-201ENST00000384883 83 ntBASIC1.98□□□□□ -2.09
UBL4AP11441 MIR515-1-201ENST00000384884 83 ntBASIC1.98□□□□□ -2.09
UBL4AP11441 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
UBL4AP11441 Y_RNA.579-201ENST00000390939 94 ntBASIC1.98□□□□□ -2.09
UBL4AP11441 AL135786.1-201ENST00000415892 214 ntBASIC1.98□□□□□ -2.09
UBL4AP11441 AC016909.1-201ENST00000415916 166 ntBASIC1.98□□□□□ -2.09
UBL4AP11441 AL356320.1-201ENST00000429616 163 ntBASIC1.98□□□□□ -2.09
UBL4AP11441 RNU6-976P-201ENST00000516086 111 ntBASIC1.98□□□□□ -2.09
UBL4AP11441 MIR4435-1-201ENST00000582552 80 ntBASIC1.98□□□□□ -2.09
UBL4AP11441 RNU6-1115P-201ENST00000362490 106 ntBASIC1.97□□□□□ -2.09
UBL4AP11441 RNU4-42P-201ENST00000364738 142 ntBASIC1.97□□□□□ -2.09
UBL4AP11441 Y_RNA.287-201ENST00000364853 94 ntBASIC1.97□□□□□ -2.09
UBL4AP11441 Y_RNA.500-201ENST00000384466 111 ntBASIC1.97□□□□□ -2.09
UBL4AP11441 MIR23A-201ENST00000385245 73 ntBASIC1.97□□□□□ -2.09
UBL4AP11441 MIR676-201ENST00000390702 67 ntBASIC1.97□□□□□ -2.09
UBL4AP11441 RNA5SP475-201ENST00000410568 110 ntBASIC1.97□□□□□ -2.09
UBL4AP11441 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.97□□□□□ -2.09
UBL4AP11441 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.97□□□□□ -2.09
UBL4AP11441 SNORA40.9-201ENST00000515895 93 ntBASIC1.97□□□□□ -2.09
UBL4AP11441 RNU6-1170P-201ENST00000515974 106 ntBASIC1.97□□□□□ -2.09
UBL4AP11441 AC084364.2-201ENST00000546924 395 ntBASIC1.97□□□□□ -2.09
UBL4AP11441 MIR4713-201ENST00000582691 75 ntBASIC1.97□□□□□ -2.09
UBL4AP11441 MIR3935-201ENST00000583472 104 ntBASIC1.97□□□□□ -2.09
UBL4AP11441 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.97□□□□□ -2.09
UBL4AP11441 AC138305.3-201ENST00000624988 240 ntBASIC1.97□□□□□ -2.09
UBL4AP11441 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.97□□□□□ -2.09
UBL4AP11441 AC010615.1-201ENST00000594254 1764 ntBASIC1.97□□□□□ -2.09
UBL4AP11441 MIR410-201ENST00000362222 80 ntBASIC1.96□□□□□ -2.1
UBL4AP11441 RNU6-112P-201ENST00000363599 104 ntBASIC1.96□□□□□ -2.1
UBL4AP11441 Y_RNA.197-201ENST00000364004 102 ntBASIC1.96□□□□□ -2.1
UBL4AP11441 Y_RNA.252-201ENST00000364556 101 ntBASIC1.96□□□□□ -2.1
UBL4AP11441 SNORA72.2-201ENST00000365028 127 ntBASIC1.96□□□□□ -2.1
UBL4AP11441 RNY3P4-201ENST00000384428 101 ntBASIC1.96□□□□□ -2.1
UBL4AP11441 MIR628-201ENST00000385229 95 ntBASIC1.96□□□□□ -2.1
UBL4AP11441 RNA5SP508-201ENST00000411327 119 ntBASIC1.96□□□□□ -2.1
UBL4AP11441 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.96□□□□□ -2.1
UBL4AP11441 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.96□□□□□ -2.1
UBL4AP11441 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.96□□□□□ -2.1
UBL4AP11441 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.96□□□□□ -2.1
UBL4AP11441 RNU6-625P-201ENST00000459412 107 ntBASIC1.96□□□□□ -2.1
UBL4AP11441 RPL23AP42-201ENST00000471152 471 ntBASIC1.96□□□□□ -2.1
UBL4AP11441 AC010409.1-201ENST00000487382 476 ntBASIC1.96□□□□□ -2.1
UBL4AP11441 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.96□□□□□ -2.1
UBL4AP11441 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.96□□□□□ -2.1
UBL4AP11441 AC022254.1-201ENST00000567857 235 ntBASIC1.96□□□□□ -2.1
UBL4AP11441 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.96□□□□□ -2.1
UBL4AP11441 MIR3684-201ENST00000579779 74 ntBASIC1.96□□□□□ -2.1
UBL4AP11441 VN1R91P-201ENST00000594377 169 ntBASIC1.96□□□□□ -2.1
UBL4AP11441 AC116312.1-201ENST00000606841 314 ntBASIC1.96□□□□□ -2.1
UBL4AP11441 AC091925.1-201ENST00000623204 462 ntBASIC1.96□□□□□ -2.1
UBL4AP11441 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
UBL4AP11441 RNU6-1310P-201ENST00000384153 107 ntBASIC1.95□□□□□ -2.1
UBL4AP11441 MIR520A-201ENST00000384862 85 ntBASIC1.95□□□□□ -2.1
UBL4AP11441 MTCO3P19-201ENST00000415864 321 ntBASIC1.95□□□□□ -2.1
UBL4AP11441 EBAG9P1-201ENST00000418955 543 ntBASIC1.95□□□□□ -2.1
UBL4AP11441 AC069257.2-201ENST00000441819 155 ntBASIC1.95□□□□□ -2.1
UBL4AP11441 Y_RNA.661-201ENST00000516003 99 ntBASIC1.95□□□□□ -2.1
UBL4AP11441 AC024995.1-201ENST00000523014 93 ntBASIC1.95□□□□□ -2.1
UBL4AP11441 AC022432.1-201ENST00000595739 310 ntBASIC1.95□□□□□ -2.1
UBL4AP11441 AC104985.2-201ENST00000620598 500 ntBASIC1.95□□□□□ -2.1
UBL4AP11441 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
UBL4AP11441 Y_RNA.5-201ENST00000362334 102 ntBASIC1.94□□□□□ -2.1
UBL4AP11441 RNU1-115P-201ENST00000365329 160 ntBASIC1.94□□□□□ -2.1
UBL4AP11441 Y_RNA.509-201ENST00000384506 99 ntBASIC1.94□□□□□ -2.1
UBL4AP11441 RNU6-296P-201ENST00000384608 107 ntBASIC1.94□□□□□ -2.1
UBL4AP11441 RNU2-7P-201ENST00000410794 178 ntBASIC1.94□□□□□ -2.1
UBL4AP11441 RPL31P63-201ENST00000422565 375 ntBASIC1.94□□□□□ -2.1
UBL4AP11441 HMGN2P19-201ENST00000425149 265 ntBASIC1.94□□□□□ -2.1
UBL4AP11441 AC096644.2-201ENST00000429278 159 ntBASIC1.94□□□□□ -2.1
UBL4AP11441 AC245047.4-201ENST00000433189 144 ntBASIC1.94□□□□□ -2.1
UBL4AP11441 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.94□□□□□ -2.1
UBL4AP11441 SNORD65B-201ENST00000459126 73 ntBASIC1.94□□□□□ -2.1
UBL4AP11441 RN7SL274P-201ENST00000492268 272 ntBASIC1.94□□□□□ -2.1
UBL4AP11441 AC010598.1-201ENST00000510378 103 ntBASIC1.94□□□□□ -2.1
UBL4AP11441 RNU1-40P-201ENST00000516816 164 ntBASIC1.94□□□□□ -2.1
UBL4AP11441 RNU1-97P-201ENST00000516872 164 ntBASIC1.94□□□□□ -2.1
UBL4AP11441 AL137100.2-201ENST00000555786 315 ntBASIC1.94□□□□□ -2.1
UBL4AP11441 AC092447.9-201ENST00000603395 144 ntBASIC1.94□□□□□ -2.1
UBL4AP11441 AL080274.1-201ENST00000605565 220 ntBASIC1.94□□□□□ -2.1
UBL4AP11441 AL590808.1-201ENST00000618696 141 ntBASIC1.94□□□□□ -2.1
UBL4AP11441 MIR3674-201ENST00000636576 68 ntBASIC1.94□□□□□ -2.1
UBL4AP11441 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
UBL4AP11441 RNA5SP467-201ENST00000391274 118 ntBASIC1.93□□□□□ -2.1
UBL4AP11441 FCF1P4-201ENST00000448326 183 ntBASIC1.93□□□□□ -2.1
UBL4AP11441 RPL23AP7-203ENST00000449021 469 ntBASIC1.93□□□□□ -2.1
UBL4AP11441 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.93□□□□□ -2.1
UBL4AP11441 RNU6-408P-201ENST00000515910 100 ntBASIC1.93□□□□□ -2.1
UBL4AP11441 RNU1-142P-201ENST00000516682 145 ntBASIC1.93□□□□□ -2.1
UBL4AP11441 SNORA31.17-201ENST00000516953 127 ntBASIC1.93□□□□□ -2.1
UBL4AP11441 AC006600.1-201ENST00000572529 153 ntBASIC1.93□□□□□ -2.1
UBL4AP11441 MIR1273D-201ENST00000577266 86 ntBASIC1.93□□□□□ -2.1
UBL4AP11441 AL138825.1-201ENST00000618587 192 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms