Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AP000568.1-201ENST00000282964 442 ntBASIC-2.15□□□□□ -2.75
TOP2AP11388 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-2.15□□□□□ -2.75
TOP2AP11388 BTF3P15-201ENST00000455606 336 ntBASIC-2.15□□□□□ -2.75
TOP2AP11388 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-2.15□□□□□ -2.75
TOP2AP11388 RNU6-732P-201ENST00000516033 103 ntBASIC-2.15□□□□□ -2.75
TOP2AP11388 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-2.15□□□□□ -2.75
TOP2AP11388 MIR4782-201ENST00000577987 79 ntBASIC-2.15□□□□□ -2.75
TOP2AP11388 AC121247.2-201ENST00000604776 136 ntBASIC-2.15□□□□□ -2.75
TOP2AP11388 RNU6-212P-201ENST00000362642 104 ntBASIC-2.16□□□□□ -2.75
TOP2AP11388 RNU6-1244P-201ENST00000363614 108 ntBASIC-2.16□□□□□ -2.75
TOP2AP11388 RNU6-580P-201ENST00000365159 107 ntBASIC-2.16□□□□□ -2.75
TOP2AP11388 Y_RNA.365-201ENST00000365537 102 ntBASIC-2.16□□□□□ -2.75
TOP2AP11388 RNU6-431P-201ENST00000383874 107 ntBASIC-2.16□□□□□ -2.75
TOP2AP11388 SNORA32.2-201ENST00000384049 122 ntBASIC-2.16□□□□□ -2.75
TOP2AP11388 RNU6-622P-201ENST00000384272 103 ntBASIC-2.16□□□□□ -2.75
TOP2AP11388 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.16□□□□□ -2.75
TOP2AP11388 RNU6-364P-201ENST00000384387 107 ntBASIC-2.16□□□□□ -2.75
TOP2AP11388 MIR1302-7-201ENST00000408841 72 ntBASIC-2.16□□□□□ -2.75
TOP2AP11388 GPM6BP2-201ENST00000432046 144 ntBASIC-2.16□□□□□ -2.75
TOP2AP11388 GPM6BP1-201ENST00000446387 144 ntBASIC-2.16□□□□□ -2.75
TOP2AP11388 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-2.16□□□□□ -2.75
TOP2AP11388 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-2.16□□□□□ -2.75
TOP2AP11388 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-2.16□□□□□ -2.75
TOP2AP11388 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-2.16□□□□□ -2.75
TOP2AP11388 RNU7-41P-201ENST00000515917 61 ntBASIC-2.16□□□□□ -2.75
TOP2AP11388 SNORD38.3-201ENST00000516599 73 ntBASIC-2.16□□□□□ -2.75
TOP2AP11388 AC012433.1-201ENST00000588916 398 ntBASIC-2.16□□□□□ -2.75
TOP2AP11388 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC-2.16□□□□□ -2.75
TOP2AP11388 AL590396.2-201ENST00000636511 1041 ntBASIC-2.16□□□□□ -2.75
TOP2AP11388 Y_RNA.311-201ENST00000365068 96 ntBASIC-2.17□□□□□ -2.76
TOP2AP11388 RNU6-1292P-201ENST00000383856 107 ntBASIC-2.17□□□□□ -2.76
TOP2AP11388 MIR1185-2-201ENST00000408687 86 ntBASIC-2.17□□□□□ -2.76
TOP2AP11388 RNU6-856P-201ENST00000516959 98 ntBASIC-2.17□□□□□ -2.76
TOP2AP11388 Y_RNA.78-201ENST00000362970 110 ntBASIC-2.17□□□□□ -2.76
TOP2AP11388 MIR517B-201ENST00000385102 67 ntBASIC-2.17□□□□□ -2.76
TOP2AP11388 MTND3P20-201ENST00000407663 186 ntBASIC-2.17□□□□□ -2.76
TOP2AP11388 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC-2.17□□□□□ -2.76
TOP2AP11388 AC010468.3-201ENST00000508225 458 ntBASIC-2.17□□□□□ -2.76
TOP2AP11388 AC105417.1-201ENST00000514691 285 ntBASIC-2.17□□□□□ -2.76
TOP2AP11388 RNU6-528P-201ENST00000516926 100 ntBASIC-2.17□□□□□ -2.76
TOP2AP11388 RNA5SP47-201ENST00000517230 109 ntBASIC-2.17□□□□□ -2.76
TOP2AP11388 RPL21P9-201ENST00000556149 474 ntBASIC-2.17□□□□□ -2.76
TOP2AP11388 AL606834.3-201ENST00000602615 496 ntBASIC-2.17□□□□□ -2.76
TOP2AP11388 AC018889.1-201ENST00000605372 397 ntBASIC-2.17□□□□□ -2.76
TOP2AP11388 RNU6-86P-201ENST00000606534 107 ntBASIC-2.17□□□□□ -2.76
TOP2AP11388 AL118556.2-201ENST00000614375 824 ntBASIC-2.17□□□□□ -2.76
TOP2AP11388 RNU4-21P-201ENST00000362802 126 ntBASIC-2.18□□□□□ -2.76
TOP2AP11388 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC-2.18□□□□□ -2.76
TOP2AP11388 SNORA26.5-201ENST00000391215 123 ntBASIC-2.18□□□□□ -2.76
TOP2AP11388 FCF1P4-201ENST00000448326 183 ntBASIC-2.18□□□□□ -2.76
TOP2AP11388 ART2BP-201ENST00000453501 499 ntBASIC-2.18□□□□□ -2.76
TOP2AP11388 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-2.18□□□□□ -2.76
TOP2AP11388 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-2.18□□□□□ -2.76
TOP2AP11388 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-2.18□□□□□ -2.76
TOP2AP11388 HMGB1P51-201ENST00000605166 638 ntBASIC-2.18□□□□□ -2.76
TOP2AP11388 ZNF204P-201ENST00000416749 2397 ntBASIC-2.19□□□□□ -2.76
TOP2AP11388 RNU6-490P-201ENST00000362985 107 ntBASIC-2.19□□□□□ -2.76
TOP2AP11388 RNU6-1285P-201ENST00000363480 105 ntBASIC-2.19□□□□□ -2.76
TOP2AP11388 Y_RNA.283-201ENST00000364798 112 ntBASIC-2.19□□□□□ -2.76
TOP2AP11388 Y_RNA.346-201ENST00000365385 112 ntBASIC-2.19□□□□□ -2.76
TOP2AP11388 RNU6-487P-201ENST00000365430 104 ntBASIC-2.19□□□□□ -2.76
TOP2AP11388 RNU6-455P-201ENST00000384681 107 ntBASIC-2.19□□□□□ -2.76
TOP2AP11388 MIR215-201ENST00000384858 110 ntBASIC-2.19□□□□□ -2.76
TOP2AP11388 MIR518B-201ENST00000385127 83 ntBASIC-2.19□□□□□ -2.76
TOP2AP11388 SNORA12-201ENST00000391162 147 ntBASIC-2.19□□□□□ -2.76
TOP2AP11388 AC106883.1-201ENST00000418805 562 ntBASIC-2.19□□□□□ -2.76
TOP2AP11388 AC013262.1-201ENST00000426710 252 ntBASIC-2.19□□□□□ -2.76
TOP2AP11388 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC-2.19□□□□□ -2.76
TOP2AP11388 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC-2.19□□□□□ -2.76
TOP2AP11388 RNU7-12P-201ENST00000516030 62 ntBASIC-2.19□□□□□ -2.76
TOP2AP11388 AC134698.4-201ENST00000523451 826 ntBASIC-2.19□□□□□ -2.76
TOP2AP11388 SNRPGP1-201ENST00000553864 222 ntBASIC-2.19□□□□□ -2.76
TOP2AP11388 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-2.19□□□□□ -2.76
TOP2AP11388 AC005562.2-201ENST00000618264 111 ntBASIC-2.19□□□□□ -2.76
TOP2AP11388 RNU6-226P-201ENST00000363778 107 ntBASIC-2.2□□□□□ -2.76
TOP2AP11388 Y_RNA.376-201ENST00000365638 108 ntBASIC-2.2□□□□□ -2.76
TOP2AP11388 MRPL42P3-201ENST00000401492 326 ntBASIC-2.2□□□□□ -2.76
TOP2AP11388 HSFY7P-201ENST00000432672 318 ntBASIC-2.2□□□□□ -2.76
TOP2AP11388 HSFY8P-201ENST00000437934 318 ntBASIC-2.2□□□□□ -2.76
TOP2AP11388 AC079382.1-201ENST00000493346 557 ntBASIC-2.2□□□□□ -2.76
TOP2AP11388 AC010493.1-201ENST00000513479 292 ntBASIC-2.2□□□□□ -2.76
TOP2AP11388 AC091135.1-201ENST00000585943 307 ntBASIC-2.2□□□□□ -2.76
TOP2AP11388 AC104260.1-201ENST00000616660 539 ntBASIC-2.2□□□□□ -2.76
TOP2AP11388 RNU6-1167P-201ENST00000363227 94 ntBASIC-2.21□□□□□ -2.76
TOP2AP11388 RNU4-28P-201ENST00000364739 141 ntBASIC-2.21□□□□□ -2.76
TOP2AP11388 SNORD31B-201ENST00000364977 69 ntBASIC-2.21□□□□□ -2.76
TOP2AP11388 RNU6-1336P-201ENST00000383886 109 ntBASIC-2.21□□□□□ -2.76
TOP2AP11388 MIR520C-201ENST00000385005 87 ntBASIC-2.21□□□□□ -2.76
TOP2AP11388 AL354692.1-201ENST00000423044 315 ntBASIC-2.21□□□□□ -2.76
TOP2AP11388 AC007283.2-201ENST00000424739 197 ntBASIC-2.21□□□□□ -2.76
TOP2AP11388 FO393419.3-201ENST00000428741 282 ntBASIC-2.21□□□□□ -2.76
TOP2AP11388 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-2.21□□□□□ -2.76
TOP2AP11388 BNIP3P30-201ENST00000601184 574 ntBASIC-2.21□□□□□ -2.76
TOP2AP11388 SNORA70.25-201ENST00000612741 95 ntBASIC-2.21□□□□□ -2.76
TOP2AP11388 Y_RNA.128-201ENST00000363391 112 ntBASIC-2.22□□□□□ -2.76
TOP2AP11388 Y_RNA.437-201ENST00000384113 113 ntBASIC-2.22□□□□□ -2.76
TOP2AP11388 U8.16-201ENST00000391279 133 ntBASIC-2.22□□□□□ -2.76
TOP2AP11388 PSMA6P3-201ENST00000428242 164 ntBASIC-2.22□□□□□ -2.76
TOP2AP11388 PRDX4P1-201ENST00000507189 574 ntBASIC-2.22□□□□□ -2.76
TOP2AP11388 MIR6851-201ENST00000617060 67 ntBASIC-2.22□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms