Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.69□□□□□ -2.3
UBCP0CG48 AC145350.1-201ENST00000567426 208 ntBASIC0.69□□□□□ -2.3
UBCP0CG48 MIR4760-201ENST00000585040 80 ntBASIC0.69□□□□□ -2.3
UBCP0CG48 snoU13.31-201ENST00000607291 104 ntBASIC0.69□□□□□ -2.3
UBCP0CG48 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
UBCP0CG48 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
UBCP0CG48 RNU5F-3P-201ENST00000363767 117 ntBASIC0.68□□□□□ -2.3
UBCP0CG48 RNU6-873P-201ENST00000363833 107 ntBASIC0.68□□□□□ -2.3
UBCP0CG48 RNU6-392P-201ENST00000364926 101 ntBASIC0.68□□□□□ -2.3
UBCP0CG48 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
UBCP0CG48 MIR514A2-201ENST00000385131 88 ntBASIC0.68□□□□□ -2.3
UBCP0CG48 MIR514A3-201ENST00000385132 88 ntBASIC0.68□□□□□ -2.3
UBCP0CG48 CALM2P3-201ENST00000400429 449 ntBASIC0.68□□□□□ -2.3
UBCP0CG48 MIR942-201ENST00000401111 86 ntBASIC0.68□□□□□ -2.3
UBCP0CG48 RNU4-55P-201ENST00000410731 137 ntBASIC0.68□□□□□ -2.3
UBCP0CG48 MRPS10P1-201ENST00000448483 130 ntBASIC0.68□□□□□ -2.3
UBCP0CG48 TPT1P7-201ENST00000458300 517 ntBASIC0.68□□□□□ -2.3
UBCP0CG48 AC022493.2-201ENST00000506122 481 ntBASIC0.68□□□□□ -2.3
UBCP0CG48 AC104383.1-201ENST00000530297 370 ntBASIC0.68□□□□□ -2.3
UBCP0CG48 LRRC34P1-201ENST00000542742 915 ntBASIC0.68□□□□□ -2.3
UBCP0CG48 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.68□□□□□ -2.3
UBCP0CG48 AC106800.4-201ENST00000614905 153 ntBASIC0.68□□□□□ -2.3
UBCP0CG48 AC006504.8-201ENST00000621046 635 ntBASIC0.68□□□□□ -2.3
UBCP0CG48 AC023510.2-201ENST00000622162 746 ntBASIC0.68□□□□□ -2.3
UBCP0CG48 AC008163.1-202ENST00000636004 2889 ntBASIC0.67□□□□□ -2.3
UBCP0CG48 RNU6-1322P-201ENST00000364309 107 ntBASIC0.67□□□□□ -2.3
UBCP0CG48 SNORA69-201ENST00000383895 132 ntBASIC0.67□□□□□ -2.3
UBCP0CG48 Y_RNA.415-201ENST00000384012 112 ntBASIC0.67□□□□□ -2.3
UBCP0CG48 Z82188.1-201ENST00000436709 154 ntBASIC0.67□□□□□ -2.3
UBCP0CG48 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.67□□□□□ -2.3
UBCP0CG48 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.67□□□□□ -2.3
UBCP0CG48 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.67□□□□□ -2.3
UBCP0CG48 MTND3P16-201ENST00000452205 344 ntBASIC0.67□□□□□ -2.3
UBCP0CG48 SNORD65B-201ENST00000459126 73 ntBASIC0.67□□□□□ -2.3
UBCP0CG48 AC027288.2-201ENST00000553028 243 ntBASIC0.67□□□□□ -2.3
UBCP0CG48 AC108706.1-201ENST00000611053 297 ntBASIC0.67□□□□□ -2.3
UBCP0CG48 MIR6079-201ENST00000635807 62 ntBASIC0.67□□□□□ -2.3
UBCP0CG48 AC068137.4-201ENST00000638485 296 ntBASIC0.67□□□□□ -2.3
UBCP0CG48 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
UBCP0CG48 Y_RNA.100-201ENST00000363141 102 ntBASIC0.66□□□□□ -2.3
UBCP0CG48 RNU6-128P-201ENST00000383976 107 ntBASIC0.66□□□□□ -2.3
UBCP0CG48 Z82205.1-201ENST00000428456 297 ntBASIC0.66□□□□□ -2.3
UBCP0CG48 CALM2P4-201ENST00000430810 426 ntBASIC0.66□□□□□ -2.3
UBCP0CG48 AL445305.1-201ENST00000432577 575 ntBASIC0.66□□□□□ -2.3
UBCP0CG48 MTCO2P7-201ENST00000446518 666 ntBASIC0.66□□□□□ -2.3
UBCP0CG48 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.66□□□□□ -2.3
UBCP0CG48 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.66□□□□□ -2.3
UBCP0CG48 RNU6-956P-201ENST00000458868 103 ntBASIC0.66□□□□□ -2.3
UBCP0CG48 RNU7-187P-201ENST00000458985 68 ntBASIC0.66□□□□□ -2.3
UBCP0CG48 RNU7-21P-201ENST00000459430 62 ntBASIC0.66□□□□□ -2.3
UBCP0CG48 RNA5SP458-201ENST00000516188 119 ntBASIC0.66□□□□□ -2.3
UBCP0CG48 RNU7-28P-201ENST00000516759 62 ntBASIC0.66□□□□□ -2.3
UBCP0CG48 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.66□□□□□ -2.3
UBCP0CG48 MIR4698-201ENST00000577795 80 ntBASIC0.66□□□□□ -2.3
UBCP0CG48 AL158209.2-201ENST00000619266 216 ntBASIC0.66□□□□□ -2.3
UBCP0CG48 RNU6-727P-201ENST00000363592 107 ntBASIC0.65□□□□□ -2.31
UBCP0CG48 RNU6-280P-201ENST00000364145 104 ntBASIC0.65□□□□□ -2.31
UBCP0CG48 Y_RNA.265-201ENST00000364677 108 ntBASIC0.65□□□□□ -2.31
UBCP0CG48 RNU6-793P-201ENST00000384233 104 ntBASIC0.65□□□□□ -2.31
UBCP0CG48 RNU6-790P-201ENST00000384479 105 ntBASIC0.65□□□□□ -2.31
UBCP0CG48 MIR562-201ENST00000384894 95 ntBASIC0.65□□□□□ -2.31
UBCP0CG48 U8.16-201ENST00000391279 133 ntBASIC0.65□□□□□ -2.31
UBCP0CG48 MTND5P15-201ENST00000434246 349 ntBASIC0.65□□□□□ -2.31
UBCP0CG48 MTND4P18-201ENST00000447010 465 ntBASIC0.65□□□□□ -2.31
UBCP0CG48 RNU7-90P-201ENST00000459216 62 ntBASIC0.65□□□□□ -2.31
UBCP0CG48 AC091179.3-201ENST00000474761 144 ntBASIC0.65□□□□□ -2.31
UBCP0CG48 RPS27P22-201ENST00000478056 241 ntBASIC0.65□□□□□ -2.31
UBCP0CG48 OR9P1P-201ENST00000496431 281 ntBASIC0.65□□□□□ -2.31
UBCP0CG48 MTCO2P30-201ENST00000503662 364 ntBASIC0.65□□□□□ -2.31
UBCP0CG48 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.65□□□□□ -2.31
UBCP0CG48 RNA5SP255-201ENST00000516370 107 ntBASIC0.65□□□□□ -2.31
UBCP0CG48 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.65□□□□□ -2.31
UBCP0CG48 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.65□□□□□ -2.31
UBCP0CG48 AP002001.1-203ENST00000534002 267 ntBASIC0.65□□□□□ -2.31
UBCP0CG48 AL359821.1-201ENST00000605519 182 ntBASIC0.65□□□□□ -2.31
UBCP0CG48 RNA5SP361-201ENST00000362686 118 ntBASIC0.64□□□□□ -2.31
UBCP0CG48 Y_RNA.481-201ENST00000384373 102 ntBASIC0.64□□□□□ -2.31
UBCP0CG48 Y_RNA.582-201ENST00000391023 95 ntBASIC0.64□□□□□ -2.31
UBCP0CG48 RNU6-159P-201ENST00000391080 106 ntBASIC0.64□□□□□ -2.31
UBCP0CG48 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.64□□□□□ -2.31
UBCP0CG48 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.64□□□□□ -2.31
UBCP0CG48 AC010469.2-201ENST00000496412 480 ntBASIC0.64□□□□□ -2.31
UBCP0CG48 AC010598.1-201ENST00000510378 103 ntBASIC0.64□□□□□ -2.31
UBCP0CG48 SNORA70.12-201ENST00000516084 153 ntBASIC0.64□□□□□ -2.31
UBCP0CG48 RNU6-113P-201ENST00000516653 101 ntBASIC0.64□□□□□ -2.31
UBCP0CG48 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.64□□□□□ -2.31
UBCP0CG48 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.64□□□□□ -2.31
UBCP0CG48 AC023157.2-201ENST00000540596 141 ntBASIC0.64□□□□□ -2.31
UBCP0CG48 PIGPP4-201ENST00000584447 307 ntBASIC0.64□□□□□ -2.31
UBCP0CG48 AC010620.1-201ENST00000601088 1102 ntBASIC0.64□□□□□ -2.31
UBCP0CG48 PRELID3BP2-201ENST00000605362 201 ntBASIC0.64□□□□□ -2.31
UBCP0CG48 CASC19-280ENST00000642102 1351 ntBASIC0.64□□□□□ -2.31
UBCP0CG48 RNU6-522P-201ENST00000364497 107 ntBASIC0.63□□□□□ -2.31
UBCP0CG48 RNU6-541P-201ENST00000384709 110 ntBASIC0.63□□□□□ -2.31
UBCP0CG48 RNU6-648P-201ENST00000410190 107 ntBASIC0.63□□□□□ -2.31
UBCP0CG48 MTCO3P19-201ENST00000415864 321 ntBASIC0.63□□□□□ -2.31
UBCP0CG48 AC004941.2-201ENST00000427009 228 ntBASIC0.63□□□□□ -2.31
UBCP0CG48 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.63□□□□□ -2.31
UBCP0CG48 PCMTD1P1-201ENST00000455560 355 ntBASIC0.63□□□□□ -2.31
UBCP0CG48 LINC01399-202ENST00000458450 244 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms