Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.29□□□□□ -2.04
HMGB1P09429 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HMGB1P09429 Y_RNA.339-201ENST00000365325 102 ntBASIC2.28□□□□□ -2.04
HMGB1P09429 RNU6-876P-201ENST00000391295 104 ntBASIC2.28□□□□□ -2.04
HMGB1P09429 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.28□□□□□ -2.04
HMGB1P09429 AC245047.3-201ENST00000429428 127 ntBASIC2.28□□□□□ -2.04
HMGB1P09429 TOMM22P2-201ENST00000430735 237 ntBASIC2.28□□□□□ -2.04
HMGB1P09429 RPS27P1-201ENST00000450552 247 ntBASIC2.28□□□□□ -2.04
HMGB1P09429 AC022868.1-201ENST00000517767 391 ntBASIC2.28□□□□□ -2.04
HMGB1P09429 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.28□□□□□ -2.04
HMGB1P09429 AC125232.2-201ENST00000592457 143 ntBASIC2.28□□□□□ -2.04
HMGB1P09429 AC022217.4-201ENST00000604389 163 ntBASIC2.28□□□□□ -2.04
HMGB1P09429 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.28□□□□□ -2.04
HMGB1P09429 AC040896.1-201ENST00000613819 479 ntBASIC2.28□□□□□ -2.04
HMGB1P09429 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.28□□□□□ -2.04
HMGB1P09429 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.28□□□□□ -2.04
HMGB1P09429 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.27□□□□□ -2.05
HMGB1P09429 RNU6-997P-201ENST00000384725 107 ntBASIC2.27□□□□□ -2.05
HMGB1P09429 MIR194-1-201ENST00000384892 85 ntBASIC2.27□□□□□ -2.05
HMGB1P09429 MIR23A-201ENST00000385245 73 ntBASIC2.27□□□□□ -2.05
HMGB1P09429 EIF1P2-201ENST00000428233 350 ntBASIC2.27□□□□□ -2.05
HMGB1P09429 AC027119.1-201ENST00000440877 241 ntBASIC2.27□□□□□ -2.05
HMGB1P09429 FGF7P6-202ENST00000451282 293 ntBASIC2.27□□□□□ -2.05
HMGB1P09429 AC010469.2-201ENST00000496412 480 ntBASIC2.27□□□□□ -2.05
HMGB1P09429 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.27□□□□□ -2.05
HMGB1P09429 RNU7-99P-201ENST00000516271 62 ntBASIC2.27□□□□□ -2.05
HMGB1P09429 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.27□□□□□ -2.05
HMGB1P09429 AC092794.1-201ENST00000612734 582 ntBASIC2.27□□□□□ -2.05
HMGB1P09429 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.27□□□□□ -2.05
HMGB1P09429 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HMGB1P09429 U8.2-201ENST00000363156 134 ntBASIC2.26□□□□□ -2.05
HMGB1P09429 Y_RNA.358-201ENST00000365491 99 ntBASIC2.26□□□□□ -2.05
HMGB1P09429 Y_RNA.404-201ENST00000383978 102 ntBASIC2.26□□□□□ -2.05
HMGB1P09429 RNU6-1065P-201ENST00000384513 106 ntBASIC2.26□□□□□ -2.05
HMGB1P09429 Y_RNA.557-201ENST00000384680 107 ntBASIC2.26□□□□□ -2.05
HMGB1P09429 SUMO2P12-201ENST00000405924 140 ntBASIC2.26□□□□□ -2.05
HMGB1P09429 RN7SKP200-201ENST00000410564 320 ntBASIC2.26□□□□□ -2.05
HMGB1P09429 RPS20P15-201ENST00000412792 311 ntBASIC2.26□□□□□ -2.05
HMGB1P09429 RPS27P16-201ENST00000425758 201 ntBASIC2.26□□□□□ -2.05
HMGB1P09429 UBE2V1P7-201ENST00000446395 340 ntBASIC2.26□□□□□ -2.05
HMGB1P09429 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.26□□□□□ -2.05
HMGB1P09429 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.26□□□□□ -2.05
HMGB1P09429 SCARNA16.2-201ENST00000516520 172 ntBASIC2.26□□□□□ -2.05
HMGB1P09429 AC105029.1-201ENST00000520250 669 ntBASIC2.26□□□□□ -2.05
HMGB1P09429 AP000889.1-201ENST00000530968 660 ntBASIC2.26□□□□□ -2.05
HMGB1P09429 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.26□□□□□ -2.05
HMGB1P09429 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.26□□□□□ -2.05
HMGB1P09429 MIR8054-201ENST00000620877 86 ntBASIC2.26□□□□□ -2.05
HMGB1P09429 WWP1P1-201ENST00000466609 2769 ntBASIC2.25□□□□□ -2.05
HMGB1P09429 RNU6-874P-201ENST00000362390 105 ntBASIC2.25□□□□□ -2.05
HMGB1P09429 RNA5SP361-201ENST00000362686 118 ntBASIC2.25□□□□□ -2.05
HMGB1P09429 MIR329-1-201ENST00000385028 80 ntBASIC2.25□□□□□ -2.05
HMGB1P09429 SNORA75.4-201ENST00000391278 119 ntBASIC2.25□□□□□ -2.05
HMGB1P09429 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.25□□□□□ -2.05
HMGB1P09429 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.25□□□□□ -2.05
HMGB1P09429 SNORA31.10-201ENST00000516482 106 ntBASIC2.25□□□□□ -2.05
HMGB1P09429 RNU6-307P-201ENST00000516743 106 ntBASIC2.25□□□□□ -2.05
HMGB1P09429 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.25□□□□□ -2.05
HMGB1P09429 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.25□□□□□ -2.05
HMGB1P09429 DEFB122-202ENST00000569013 197 ntBASIC2.25□□□□□ -2.05
HMGB1P09429 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.25□□□□□ -2.05
HMGB1P09429 AC005899.2-201ENST00000584353 90 ntBASIC2.25□□□□□ -2.05
HMGB1P09429 SNORA70B-201ENST00000384210 135 ntBASIC2.24□□□□□ -2.05
HMGB1P09429 RNA5SP213-201ENST00000391031 106 ntBASIC2.24□□□□□ -2.05
HMGB1P09429 AL079342.1-201ENST00000401460 267 ntBASIC2.24□□□□□ -2.05
HMGB1P09429 MRPL42P3-201ENST00000401492 326 ntBASIC2.24□□□□□ -2.05
HMGB1P09429 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.24□□□□□ -2.05
HMGB1P09429 AC107393.1-201ENST00000512403 346 ntBASIC2.24□□□□□ -2.05
HMGB1P09429 RNU7-128P-201ENST00000517247 62 ntBASIC2.24□□□□□ -2.05
HMGB1P09429 SUMO2P16-201ENST00000519475 264 ntBASIC2.24□□□□□ -2.05
HMGB1P09429 CYCSP23-201ENST00000519781 313 ntBASIC2.24□□□□□ -2.05
HMGB1P09429 AC004584.2-201ENST00000570407 410 ntBASIC2.24□□□□□ -2.05
HMGB1P09429 AL365434.2-201ENST00000607979 234 ntBASIC2.24□□□□□ -2.05
HMGB1P09429 AC021506.2-201ENST00000612354 169 ntBASIC2.24□□□□□ -2.05
HMGB1P09429 AL078604.3-201ENST00000615580 211 ntBASIC2.24□□□□□ -2.05
HMGB1P09429 AC092794.2-201ENST00000620933 563 ntBASIC2.24□□□□□ -2.05
HMGB1P09429 AC099654.5-201ENST00000636479 350 ntBASIC2.24□□□□□ -2.05
HMGB1P09429 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.24□□□□□ -2.05
HMGB1P09429 Y_RNA.248-201ENST00000364501 109 ntBASIC2.23□□□□□ -2.05
HMGB1P09429 RNU6-1031P-201ENST00000384773 107 ntBASIC2.23□□□□□ -2.05
HMGB1P09429 RNU6-440P-201ENST00000390882 105 ntBASIC2.23□□□□□ -2.05
HMGB1P09429 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.23□□□□□ -2.05
HMGB1P09429 MRPS10P1-201ENST00000448483 130 ntBASIC2.23□□□□□ -2.05
HMGB1P09429 RPS29P21-201ENST00000496272 170 ntBASIC2.23□□□□□ -2.05
HMGB1P09429 AC010598.1-201ENST00000510378 103 ntBASIC2.23□□□□□ -2.05
HMGB1P09429 RNU6-1213P-201ENST00000517075 94 ntBASIC2.23□□□□□ -2.05
HMGB1P09429 SNRPGP19-201ENST00000603826 189 ntBASIC2.23□□□□□ -2.05
HMGB1P09429 AL021879.1-201ENST00000611756 288 ntBASIC2.23□□□□□ -2.05
HMGB1P09429 uc_338.5-201ENST00000611839 155 ntBASIC2.23□□□□□ -2.05
HMGB1P09429 MIR1244-1-201ENST00000612829 85 ntBASIC2.23□□□□□ -2.05
HMGB1P09429 AC104260.1-201ENST00000616660 539 ntBASIC2.23□□□□□ -2.05
HMGB1P09429 MIR1244-3-201ENST00000635744 85 ntBASIC2.23□□□□□ -2.05
HMGB1P09429 MIR1244-2-201ENST00000636449 85 ntBASIC2.23□□□□□ -2.05
HMGB1P09429 MIR1244-4-202ENST00000636813 85 ntBASIC2.23□□□□□ -2.05
HMGB1P09429 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.23□□□□□ -2.05
HMGB1P09429 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC2.23□□□□□ -2.05
HMGB1P09429 AL161722.3-201ENST00000605789 2983 ntBASIC2.22□□□□□ -2.05
HMGB1P09429 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
HMGB1P09429 RNU6-845P-201ENST00000362578 103 ntBASIC2.22□□□□□ -2.05
HMGB1P09429 Y_RNA.498-201ENST00000384460 102 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms