Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 SNORD89-201ENST00000390981 114 ntBASIC0.18□□□□□ -2.38
COL1A1P02452 GPR143P-201ENST00000434155 205 ntBASIC0.18□□□□□ -2.38
COL1A1P02452 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.18□□□□□ -2.38
COL1A1P02452 GMFBP1-201ENST00000467831 427 ntBASIC0.18□□□□□ -2.38
COL1A1P02452 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.18□□□□□ -2.38
COL1A1P02452 MIR4778-201ENST00000577635 80 ntBASIC0.18□□□□□ -2.38
COL1A1P02452 MTND1P15-201ENST00000579262 949 ntBASIC0.18□□□□□ -2.38
COL1A1P02452 MIR3682-201ENST00000581338 84 ntBASIC0.18□□□□□ -2.38
COL1A1P02452 RNU6-85P-201ENST00000605989 107 ntBASIC0.18□□□□□ -2.38
COL1A1P02452 U6.73-201ENST00000619194 103 ntBASIC0.18□□□□□ -2.38
COL1A1P02452 RNU6-227P-201ENST00000362865 103 ntBASIC0.17□□□□□ -2.38
COL1A1P02452 RNU6-108P-201ENST00000365558 107 ntBASIC0.17□□□□□ -2.38
COL1A1P02452 RNU6-74P-201ENST00000384235 107 ntBASIC0.17□□□□□ -2.38
COL1A1P02452 Y_RNA.457-201ENST00000384237 111 ntBASIC0.17□□□□□ -2.38
COL1A1P02452 SNORA67.2-201ENST00000384300 149 ntBASIC0.17□□□□□ -2.38
COL1A1P02452 SNORD41-201ENST00000386967 70 ntBASIC0.17□□□□□ -2.38
COL1A1P02452 AL355143.1-201ENST00000407101 841 ntBASIC0.17□□□□□ -2.38
COL1A1P02452 MIR1468-201ENST00000410600 86 ntBASIC0.17□□□□□ -2.38
COL1A1P02452 RPS3AP3-201ENST00000411933 242 ntBASIC0.17□□□□□ -2.38
COL1A1P02452 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.17□□□□□ -2.38
COL1A1P02452 AC005002.2-201ENST00000438228 269 ntBASIC0.17□□□□□ -2.38
COL1A1P02452 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.17□□□□□ -2.38
COL1A1P02452 snoU13.6-201ENST00000458785 104 ntBASIC0.17□□□□□ -2.38
COL1A1P02452 AL049830.1-201ENST00000468034 425 ntBASIC0.17□□□□□ -2.38
COL1A1P02452 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.17□□□□□ -2.38
COL1A1P02452 AC022493.2-201ENST00000506122 481 ntBASIC0.17□□□□□ -2.38
COL1A1P02452 ELOCP32-201ENST00000548625 324 ntBASIC0.17□□□□□ -2.38
COL1A1P02452 BNIP3P39-201ENST00000601077 554 ntBASIC0.17□□□□□ -2.38
COL1A1P02452 AL357075.2-201ENST00000614906 189 ntBASIC0.17□□□□□ -2.38
COL1A1P02452 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.17□□□□□ -2.38
COL1A1P02452 AL078596.1-201ENST00000624856 447 ntBASIC0.17□□□□□ -2.38
COL1A1P02452 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.17□□□□□ -2.38
COL1A1P02452 MIR101-1-201ENST00000362265 75 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 RNU5B-2P-201ENST00000363036 113 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 RNU6-266P-201ENST00000364225 107 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 RNU6-1335P-201ENST00000365426 107 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 Y_RNA.367-201ENST00000365544 101 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 RNU6-793P-201ENST00000384233 104 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 RNU6-1127P-201ENST00000384580 107 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 MIR1-2-201ENST00000384961 85 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 MIR122-201ENST00000385044 85 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 SNORA16.2-201ENST00000390991 127 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 RNU1-119P-201ENST00000391122 165 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.16□□□□□ -2.38
COL1A1P02452 RPS26P42-201ENST00000413485 326 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 MTCO2P12-201ENST00000427426 682 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.16□□□□□ -2.38
COL1A1P02452 UBE2D3P4-201ENST00000441973 436 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC0.16□□□□□ -2.38
COL1A1P02452 RNU7-12P-201ENST00000516030 62 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 RNU6-917P-201ENST00000516294 104 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 RNU6-344P-201ENST00000516635 111 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 AC027419.1-201ENST00000522976 328 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.16□□□□□ -2.38
COL1A1P02452 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.16□□□□□ -2.38
COL1A1P02452 MTCO3P23-201ENST00000561363 289 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 FGF7P1-201ENST00000582820 288 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.16□□□□□ -2.38
COL1A1P02452 Z84480.1-201ENST00000605131 311 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 AC093913.1-201ENST00000614178 329 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 AP000568.1-201ENST00000282964 442 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 SNORD114-31-201ENST00000363219 75 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 Y_RNA.399-201ENST00000383955 105 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 RNU6-1067P-201ENST00000384752 107 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 SNORA75.2-201ENST00000391138 150 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 SNORA75.3-201ENST00000391231 150 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 RNA5SP504-201ENST00000410676 117 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.16□□□□□ -2.38
COL1A1P02452 AL008987.1-201ENST00000415528 237 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 AC098592.1-201ENST00000419352 333 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.16□□□□□ -2.38
COL1A1P02452 RPL23AP50-201ENST00000434149 455 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.16□□□□□ -2.38
COL1A1P02452 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.16□□□□□ -2.38
COL1A1P02452 MTCO2P7-201ENST00000446518 666 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.16□□□□□ -2.38
COL1A1P02452 AC245047.8-201ENST00000456455 284 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.16□□□□□ -2.38
COL1A1P02452 RNU6-1110P-201ENST00000516462 101 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 Y_RNA.700-201ENST00000516806 100 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.16□□□□□ -2.38
COL1A1P02452 AC106038.2-201ENST00000520706 568 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
COL1A1P02452 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.16□□□□□ -2.38
COL1A1P02452 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.16□□□□□ -2.38
COL1A1P02452 AL136317.1-201ENST00000612653 226 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 MIR7844-201ENST00000616161 122 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 AC137590.2-201ENST00000619709 240 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 AC099654.13-201ENST00000639774 207 ntBASIC0.16□□□□□ -2.38
COL1A1P02452 RNU6-500P-201ENST00000362349 107 ntBASIC0.15□□□□□ -2.39
COL1A1P02452 Y_RNA.265-201ENST00000364677 108 ntBASIC0.15□□□□□ -2.39
COL1A1P02452 RNY4P34-201ENST00000364779 95 ntBASIC0.15□□□□□ -2.39
COL1A1P02452 Y_RNA.330-201ENST00000365230 109 ntBASIC0.15□□□□□ -2.39
COL1A1P02452 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.15□□□□□ -2.39
COL1A1P02452 RNY1P8-201ENST00000383970 114 ntBASIC0.15□□□□□ -2.39
COL1A1P02452 AC016909.1-201ENST00000415916 166 ntBASIC0.15□□□□□ -2.39
COL1A1P02452 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.15□□□□□ -2.39
COL1A1P02452 AL162725.1-201ENST00000435405 301 ntBASIC0.15□□□□□ -2.39
COL1A1P02452 AC093019.1-201ENST00000443135 252 ntBASIC0.15□□□□□ -2.39
COL1A1P02452 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms