Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
PDGFBP01127 MIR96-201ENST00000362288 78 ntBASIC1.67□□□□□ -2.14
PDGFBP01127 Y_RNA.106-201ENST00000363189 100 ntBASIC1.67□□□□□ -2.14
PDGFBP01127 SNORD87-201ENST00000364849 89 ntBASIC1.67□□□□□ -2.14
PDGFBP01127 AC243428.1-201ENST00000421099 264 ntBASIC1.67□□□□□ -2.14
PDGFBP01127 AC007395.1-201ENST00000451333 677 ntBASIC1.67□□□□□ -2.14
PDGFBP01127 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.67□□□□□ -2.14
PDGFBP01127 AP000870.1-201ENST00000472927 406 ntBASIC1.67□□□□□ -2.14
PDGFBP01127 AC091951.2-201ENST00000500762 203 ntBASIC1.67□□□□□ -2.14
PDGFBP01127 RNU6-559P-201ENST00000516151 98 ntBASIC1.67□□□□□ -2.14
PDGFBP01127 Y_RNA.706-201ENST00000516933 99 ntBASIC1.67□□□□□ -2.14
PDGFBP01127 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.67□□□□□ -2.14
PDGFBP01127 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.67□□□□□ -2.14
PDGFBP01127 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.67□□□□□ -2.14
PDGFBP01127 MIR4421-201ENST00000578133 69 ntBASIC1.67□□□□□ -2.14
PDGFBP01127 MIR5696-201ENST00000578474 85 ntBASIC1.67□□□□□ -2.14
PDGFBP01127 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.67□□□□□ -2.14
PDGFBP01127 AC005014.2-201ENST00000607795 599 ntBASIC1.67□□□□□ -2.14
PDGFBP01127 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.67□□□□□ -2.14
PDGFBP01127 MIR1244-1-201ENST00000612829 85 ntBASIC1.67□□□□□ -2.14
PDGFBP01127 MIR6515-201ENST00000619843 57 ntBASIC1.67□□□□□ -2.14
PDGFBP01127 PVT1_3.1-201ENST00000620853 95 ntBASIC1.67□□□□□ -2.14
PDGFBP01127 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.67□□□□□ -2.14
PDGFBP01127 MIR1244-3-201ENST00000635744 85 ntBASIC1.67□□□□□ -2.14
PDGFBP01127 MIR1244-2-201ENST00000636449 85 ntBASIC1.67□□□□□ -2.14
PDGFBP01127 MIR1244-4-202ENST00000636813 85 ntBASIC1.67□□□□□ -2.14
PDGFBP01127 MTND4P12-201ENST00000498999 1377 ntBASIC1.67□□□□□ -2.14
PDGFBP01127 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.67□□□□□ -2.14
PDGFBP01127 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
PDGFBP01127 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.66□□□□□ -2.14
PDGFBP01127 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
PDGFBP01127 RNU1-76P-201ENST00000362903 159 ntBASIC1.66□□□□□ -2.14
PDGFBP01127 RNY1P16-201ENST00000363063 111 ntBASIC1.66□□□□□ -2.14
PDGFBP01127 RNU6-873P-201ENST00000363833 107 ntBASIC1.66□□□□□ -2.14
PDGFBP01127 RNU6-595P-201ENST00000363944 107 ntBASIC1.66□□□□□ -2.14
PDGFBP01127 SUMO2P12-201ENST00000405924 140 ntBASIC1.66□□□□□ -2.14
PDGFBP01127 MIR320B2-201ENST00000408479 138 ntBASIC1.66□□□□□ -2.14
PDGFBP01127 EBAG9P1-201ENST00000418955 543 ntBASIC1.66□□□□□ -2.14
PDGFBP01127 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.66□□□□□ -2.14
PDGFBP01127 AC016925.1-201ENST00000458303 298 ntBASIC1.66□□□□□ -2.14
PDGFBP01127 AC097473.1-201ENST00000508142 408 ntBASIC1.66□□□□□ -2.14
PDGFBP01127 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.66□□□□□ -2.14
PDGFBP01127 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.66□□□□□ -2.14
PDGFBP01127 RNU6-1041P-201ENST00000516254 102 ntBASIC1.66□□□□□ -2.14
PDGFBP01127 RNU1-92P-201ENST00000517017 135 ntBASIC1.66□□□□□ -2.14
PDGFBP01127 FRG2DP-202ENST00000566967 323 ntBASIC1.66□□□□□ -2.14
PDGFBP01127 MIR4419B-201ENST00000577260 68 ntBASIC1.66□□□□□ -2.14
PDGFBP01127 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.66□□□□□ -2.14
PDGFBP01127 MIR4285-201ENST00000581001 85 ntBASIC1.66□□□□□ -2.14
PDGFBP01127 UBE2V2P2-201ENST00000587677 504 ntBASIC1.66□□□□□ -2.14
PDGFBP01127 MIR8074-201ENST00000615081 81 ntBASIC1.66□□□□□ -2.14
PDGFBP01127 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.66□□□□□ -2.14
PDGFBP01127 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
PDGFBP01127 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.66□□□□□ -2.14
PDGFBP01127 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
PDGFBP01127 AL159152.1-201ENST00000635019 2587 ntBASIC1.65□□□□□ -2.14
PDGFBP01127 MIR1323-201ENST00000408090 73 ntBASIC1.65□□□□□ -2.15
PDGFBP01127 MIR1283-1-201ENST00000408494 87 ntBASIC1.65□□□□□ -2.15
PDGFBP01127 Y_RNA.646-201ENST00000410980 101 ntBASIC1.65□□□□□ -2.15
PDGFBP01127 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
PDGFBP01127 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.65□□□□□ -2.15
PDGFBP01127 MTND3P23-201ENST00000431980 347 ntBASIC1.65□□□□□ -2.15
PDGFBP01127 AC093019.1-201ENST00000443135 252 ntBASIC1.65□□□□□ -2.15
PDGFBP01127 ATP5J2P3-201ENST00000451550 258 ntBASIC1.65□□□□□ -2.15
PDGFBP01127 AC010531.2-201ENST00000465012 153 ntBASIC1.65□□□□□ -2.15
PDGFBP01127 RNU6-107P-201ENST00000516643 102 ntBASIC1.65□□□□□ -2.15
PDGFBP01127 SNORA31.17-201ENST00000516953 127 ntBASIC1.65□□□□□ -2.15
PDGFBP01127 APOOP3-201ENST00000536787 586 ntBASIC1.65□□□□□ -2.15
PDGFBP01127 AC027288.2-201ENST00000553028 243 ntBASIC1.65□□□□□ -2.15
PDGFBP01127 AL161670.1-201ENST00000554348 137 ntBASIC1.65□□□□□ -2.15
PDGFBP01127 Y_RNA.804-201ENST00000615262 101 ntBASIC1.65□□□□□ -2.15
PDGFBP01127 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.65□□□□□ -2.15
PDGFBP01127 AC006001.4-201ENST00000622243 395 ntBASIC1.65□□□□□ -2.15
PDGFBP01127 MTND5P16-201ENST00000460269 1703 ntBASIC1.65□□□□□ -2.15
PDGFBP01127 MIR424-201ENST00000362227 98 ntBASIC1.64□□□□□ -2.15
PDGFBP01127 Y_RNA.70-201ENST00000362886 110 ntBASIC1.64□□□□□ -2.15
PDGFBP01127 RNU6-99P-201ENST00000364721 107 ntBASIC1.64□□□□□ -2.15
PDGFBP01127 RNU4-42P-201ENST00000364738 142 ntBASIC1.64□□□□□ -2.15
PDGFBP01127 Y_RNA.358-201ENST00000365491 99 ntBASIC1.64□□□□□ -2.15
PDGFBP01127 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
PDGFBP01127 RNU6-700P-201ENST00000391043 107 ntBASIC1.64□□□□□ -2.15
PDGFBP01127 SNORA67.6-201ENST00000391093 99 ntBASIC1.64□□□□□ -2.15
PDGFBP01127 MTCYBP4-201ENST00000401524 249 ntBASIC1.64□□□□□ -2.15
PDGFBP01127 USMG5P1-201ENST00000425964 177 ntBASIC1.64□□□□□ -2.15
PDGFBP01127 HMGN1P13-201ENST00000505795 138 ntBASIC1.64□□□□□ -2.15
PDGFBP01127 AC026470.2-201ENST00000561492 181 ntBASIC1.64□□□□□ -2.15
PDGFBP01127 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
PDGFBP01127 AC069114.2-201ENST00000604699 304 ntBASIC1.64□□□□□ -2.15
PDGFBP01127 AC092794.2-201ENST00000620933 563 ntBASIC1.64□□□□□ -2.15
PDGFBP01127 MIR1302-1-201ENST00000637932 143 ntBASIC1.64□□□□□ -2.15
PDGFBP01127 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.64□□□□□ -2.15
PDGFBP01127 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.63□□□□□ -2.15
PDGFBP01127 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.63□□□□□ -2.15
PDGFBP01127 MIR340-201ENST00000362125 95 ntBASIC1.63□□□□□ -2.15
PDGFBP01127 Y_RNA.58-201ENST00000362807 102 ntBASIC1.63□□□□□ -2.15
PDGFBP01127 RNU6-112P-201ENST00000363599 104 ntBASIC1.63□□□□□ -2.15
PDGFBP01127 Y_RNA.154-201ENST00000363624 102 ntBASIC1.63□□□□□ -2.15
PDGFBP01127 RNU6-414P-201ENST00000363705 104 ntBASIC1.63□□□□□ -2.15
PDGFBP01127 Y_RNA.166-201ENST00000363730 102 ntBASIC1.63□□□□□ -2.15
PDGFBP01127 RNU4-13P-201ENST00000364019 141 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms