Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 MIR4753-201ENST00000585119 83 ntBASIC-1.01□□□□□ -2.57
POLR1AO95602 AL022154.1-201ENST00000604698 785 ntBASIC-1.01□□□□□ -2.57
POLR1AO95602 RMST_10.1-201ENST00000616309 154 ntBASIC-1.01□□□□□ -2.57
POLR1AO95602 AC092104.1-201ENST00000497346 1441 ntBASIC-1.01□□□□□ -2.57
POLR1AO95602 AP000568.1-201ENST00000282964 442 ntBASIC-1.01□□□□□ -2.57
POLR1AO95602 RNU6-1141P-201ENST00000364520 107 ntBASIC-1.01□□□□□ -2.57
POLR1AO95602 AC078809.1-201ENST00000427601 140 ntBASIC-1.01□□□□□ -2.57
POLR1AO95602 AC244670.1-201ENST00000436879 112 ntBASIC-1.01□□□□□ -2.57
POLR1AO95602 XACT-201ENST00000468762 497 ntTSL 5 BASIC-1.01□□□□□ -2.57
POLR1AO95602 AC010468.3-201ENST00000508225 458 ntBASIC-1.01□□□□□ -2.57
POLR1AO95602 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-1.01□□□□□ -2.57
POLR1AO95602 AC100830.2-201ENST00000581636 240 ntBASIC-1.01□□□□□ -2.57
POLR1AO95602 MIR4293-201ENST00000584305 78 ntBASIC-1.01□□□□□ -2.57
POLR1AO95602 AC018462.2-201ENST00000605375 395 ntBASIC-1.01□□□□□ -2.57
POLR1AO95602 SNORA26.3-201ENST00000391119 136 ntBASIC-1.02□□□□□ -2.57
POLR1AO95602 RPS3AP3-201ENST00000411933 242 ntBASIC-1.02□□□□□ -2.57
POLR1AO95602 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-1.02□□□□□ -2.57
POLR1AO95602 MTND1P31-201ENST00000449206 961 ntBASIC-1.02□□□□□ -2.57
POLR1AO95602 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-1.02□□□□□ -2.57
POLR1AO95602 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-1.02□□□□□ -2.57
POLR1AO95602 RN7SKP164-201ENST00000516138 266 ntBASIC-1.02□□□□□ -2.57
POLR1AO95602 CR383656.4-201ENST00000546909 122 ntBASIC-1.02□□□□□ -2.57
POLR1AO95602 AC104073.3-201ENST00000610942 955 ntBASIC-1.02□□□□□ -2.57
POLR1AO95602 AC106754.1-201ENST00000562632 1513 ntBASIC-1.03□□□□□ -2.57
POLR1AO95602 Y_RNA.265-201ENST00000364677 108 ntBASIC-1.03□□□□□ -2.57
POLR1AO95602 RNU6-1186P-201ENST00000410429 97 ntBASIC-1.03□□□□□ -2.57
POLR1AO95602 RNU6-1245P-201ENST00000411130 106 ntBASIC-1.03□□□□□ -2.57
POLR1AO95602 AC109327.2-201ENST00000448339 378 ntBASIC-1.03□□□□□ -2.57
POLR1AO95602 RNU7-136P-201ENST00000458819 69 ntBASIC-1.03□□□□□ -2.57
POLR1AO95602 AC105029.1-201ENST00000520250 669 ntBASIC-1.03□□□□□ -2.57
POLR1AO95602 AC008752.3-201ENST00000588113 712 ntBASIC-1.03□□□□□ -2.57
POLR1AO95602 AL117336.2-201ENST00000602435 335 ntBASIC-1.03□□□□□ -2.57
POLR1AO95602 Y_RNA.168-201ENST00000363740 102 ntBASIC-1.03□□□□□ -2.58
POLR1AO95602 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.03□□□□□ -2.58
POLR1AO95602 MTND3P17-201ENST00000416968 344 ntBASIC-1.03□□□□□ -2.58
POLR1AO95602 MLLT10P1-201ENST00000418346 262 ntBASIC-1.03□□□□□ -2.58
POLR1AO95602 RPS24P1-201ENST00000438550 371 ntBASIC-1.03□□□□□ -2.58
POLR1AO95602 AC112206.4-201ENST00000515142 405 ntBASIC-1.03□□□□□ -2.58
POLR1AO95602 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-1.03□□□□□ -2.58
POLR1AO95602 AC231657.1-201ENST00000624313 397 ntBASIC-1.03□□□□□ -2.58
POLR1AO95602 AC132825.7-201ENST00000638744 335 ntBASIC-1.03□□□□□ -2.58
POLR1AO95602 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-1.04□□□□□ -2.58
POLR1AO95602 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.04□□□□□ -2.58
POLR1AO95602 RNU6-1240P-201ENST00000365155 104 ntBASIC-1.04□□□□□ -2.58
POLR1AO95602 RNU6-580P-201ENST00000365159 107 ntBASIC-1.04□□□□□ -2.58
POLR1AO95602 RNU6-396P-201ENST00000365369 105 ntBASIC-1.04□□□□□ -2.58
POLR1AO95602 RNU6-364P-201ENST00000384387 107 ntBASIC-1.04□□□□□ -2.58
POLR1AO95602 RNU6-817P-201ENST00000391083 104 ntBASIC-1.04□□□□□ -2.58
POLR1AO95602 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-1.04□□□□□ -2.58
POLR1AO95602 RNU6-293P-201ENST00000411259 106 ntBASIC-1.04□□□□□ -2.58
POLR1AO95602 RPL21P38-201ENST00000418090 167 ntBASIC-1.04□□□□□ -2.58
POLR1AO95602 AC093303.1-201ENST00000514549 295 ntBASIC-1.04□□□□□ -2.58
POLR1AO95602 AP001189.2-201ENST00000527320 189 ntBASIC-1.04□□□□□ -2.58
POLR1AO95602 AC107905.1-201ENST00000616204 426 ntBASIC-1.04□□□□□ -2.58
POLR1AO95602 RMST_7.1-201ENST00000621935 268 ntBASIC-1.04□□□□□ -2.58
POLR1AO95602 AC112204.3-201ENST00000623822 332 ntBASIC-1.04□□□□□ -2.58
POLR1AO95602 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-1.05□□□□□ -2.58
POLR1AO95602 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.05□□□□□ -2.58
POLR1AO95602 RNU1-76P-201ENST00000362903 159 ntBASIC-1.05□□□□□ -2.58
POLR1AO95602 RNU6-343P-201ENST00000364709 104 ntBASIC-1.05□□□□□ -2.58
POLR1AO95602 Y_RNA.336-201ENST00000365307 109 ntBASIC-1.05□□□□□ -2.58
POLR1AO95602 MIR10A-201ENST00000385043 110 ntBASIC-1.05□□□□□ -2.58
POLR1AO95602 MIR563-201ENST00000385080 79 ntBASIC-1.05□□□□□ -2.58
POLR1AO95602 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-1.05□□□□□ -2.58
POLR1AO95602 RNU6-613P-201ENST00000410412 108 ntBASIC-1.05□□□□□ -2.58
POLR1AO95602 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-1.05□□□□□ -2.58
POLR1AO95602 HSFY7P-201ENST00000432672 318 ntBASIC-1.05□□□□□ -2.58
POLR1AO95602 HSFY8P-201ENST00000437934 318 ntBASIC-1.05□□□□□ -2.58
POLR1AO95602 Y_RNA.689-201ENST00000516589 107 ntBASIC-1.05□□□□□ -2.58
POLR1AO95602 RNU7-28P-201ENST00000516759 62 ntBASIC-1.05□□□□□ -2.58
POLR1AO95602 MIR4666A-201ENST00000580160 79 ntBASIC-1.05□□□□□ -2.58
POLR1AO95602 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-1.05□□□□□ -2.58
POLR1AO95602 AC125232.2-201ENST00000592457 143 ntBASIC-1.05□□□□□ -2.58
POLR1AO95602 AC063944.3-201ENST00000609969 533 ntBASIC-1.05□□□□□ -2.58
POLR1AO95602 AL590491.3-201ENST00000610731 82 ntBASIC-1.05□□□□□ -2.58
POLR1AO95602 MIR101-2-201ENST00000362195 79 ntBASIC-1.06□□□□□ -2.58
POLR1AO95602 RNY4P6-201ENST00000363667 96 ntBASIC-1.06□□□□□ -2.58
POLR1AO95602 U8.5-201ENST00000364528 136 ntBASIC-1.06□□□□□ -2.58
POLR1AO95602 SNORA75B-201ENST00000384053 137 ntBASIC-1.06□□□□□ -2.58
POLR1AO95602 MIR19A-201ENST00000384878 82 ntBASIC-1.06□□□□□ -2.58
POLR1AO95602 MTCO1P5-201ENST00000433573 344 ntBASIC-1.06□□□□□ -2.58
POLR1AO95602 TPTE2P1-204ENST00000435256 593 ntBASIC-1.06□□□□□ -2.58
POLR1AO95602 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-1.06□□□□□ -2.58
POLR1AO95602 RN7SKP19-201ENST00000516016 252 ntBASIC-1.06□□□□□ -2.58
POLR1AO95602 RNU7-99P-201ENST00000516271 62 ntBASIC-1.06□□□□□ -2.58
POLR1AO95602 RNU6-914P-201ENST00000516749 109 ntBASIC-1.06□□□□□ -2.58
POLR1AO95602 RNU6-897P-201ENST00000517135 105 ntBASIC-1.06□□□□□ -2.58
POLR1AO95602 AC090572.1-201ENST00000519251 160 ntBASIC-1.06□□□□□ -2.58
POLR1AO95602 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-1.06□□□□□ -2.58
POLR1AO95602 DEFB108A-201ENST00000530110 222 ntBASIC-1.06□□□□□ -2.58
POLR1AO95602 AC124016.2-201ENST00000610058 665 ntBASIC-1.06□□□□□ -2.58
POLR1AO95602 AC120349.2-201ENST00000625002 298 ntBASIC-1.06□□□□□ -2.58
POLR1AO95602 AC103706.2-201ENST00000638080 240 ntBASIC-1.06□□□□□ -2.58
POLR1AO95602 RNU6-650P-201ENST00000365658 111 ntBASIC-1.06□□□□□ -2.58
POLR1AO95602 RNU6-24P-201ENST00000384440 107 ntBASIC-1.06□□□□□ -2.58
POLR1AO95602 MIR526A1-201ENST00000384897 85 ntBASIC-1.06□□□□□ -2.58
POLR1AO95602 RPS29P27-201ENST00000463711 170 ntBASIC-1.06□□□□□ -2.58
POLR1AO95602 RNU7-41P-201ENST00000515917 61 ntBASIC-1.06□□□□□ -2.58
POLR1AO95602 MIR548AD-201ENST00000584780 82 ntBASIC-1.06□□□□□ -2.58
POLR1AO95602 AC104458.1-201ENST00000608243 463 ntBASIC-1.06□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms