Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AL139095.1-201ENST00000404326 391 ntBASIC2.25□□□□□ -2.05
LDB3O75112 ELOCP21-201ENST00000412558 336 ntBASIC2.25□□□□□ -2.05
LDB3O75112 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.25□□□□□ -2.05
LDB3O75112 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.25□□□□□ -2.05
LDB3O75112 SNORA59A-201ENST00000459326 152 ntBASIC2.25□□□□□ -2.05
LDB3O75112 AC007215.1-201ENST00000464893 276 ntBASIC2.25□□□□□ -2.05
LDB3O75112 RN7SL636P-201ENST00000497504 294 ntBASIC2.25□□□□□ -2.05
LDB3O75112 AC234781.5-201ENST00000508429 271 ntBASIC2.25□□□□□ -2.05
LDB3O75112 AC107393.1-201ENST00000512403 346 ntBASIC2.25□□□□□ -2.05
LDB3O75112 SNORA25.14-201ENST00000516481 132 ntBASIC2.25□□□□□ -2.05
LDB3O75112 AC022559.1-201ENST00000520905 205 ntBASIC2.25□□□□□ -2.05
LDB3O75112 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.25□□□□□ -2.05
LDB3O75112 AK6P2-201ENST00000549020 471 ntBASIC2.25□□□□□ -2.05
LDB3O75112 EIF4A1P12-201ENST00000551910 141 ntBASIC2.25□□□□□ -2.05
LDB3O75112 MIR3145-201ENST00000580727 82 ntBASIC2.25□□□□□ -2.05
LDB3O75112 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.25□□□□□ -2.05
LDB3O75112 AC008749.1-201ENST00000597650 306 ntBASIC2.25□□□□□ -2.05
LDB3O75112 AL713866.2-201ENST00000603579 219 ntBASIC2.25□□□□□ -2.05
LDB3O75112 SNORD113-5-201ENST00000607261 78 ntBASIC2.25□□□□□ -2.05
LDB3O75112 AC046143.2-201ENST00000609789 160 ntBASIC2.25□□□□□ -2.05
LDB3O75112 AC010999.1-201ENST00000611856 324 ntBASIC2.25□□□□□ -2.05
LDB3O75112 AC090517.3-201ENST00000625170 141 ntBASIC2.25□□□□□ -2.05
LDB3O75112 CTSLP2-204ENST00000629029 392 ntBASIC2.25□□□□□ -2.05
LDB3O75112 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.25□□□□□ -2.05
LDB3O75112 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.25□□□□□ -2.05
LDB3O75112 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.25□□□□□ -2.05
LDB3O75112 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
LDB3O75112 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.25□□□□□ -2.05
LDB3O75112 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LDB3O75112 MIR449A-201ENST00000362113 91 ntBASIC2.24□□□□□ -2.05
LDB3O75112 RNA5SP289-201ENST00000362332 137 ntBASIC2.24□□□□□ -2.05
LDB3O75112 Y_RNA.44-201ENST00000362676 108 ntBASIC2.24□□□□□ -2.05
LDB3O75112 VTRNA1-1-201ENST00000363120 99 ntBASIC2.24□□□□□ -2.05
LDB3O75112 RNU6-47P-201ENST00000383866 107 ntBASIC2.24□□□□□ -2.05
LDB3O75112 Y_RNA.500-201ENST00000384466 111 ntBASIC2.24□□□□□ -2.05
LDB3O75112 Y_RNA.569-201ENST00000384749 103 ntBASIC2.24□□□□□ -2.05
LDB3O75112 RNU2-63P-201ENST00000410792 194 ntBASIC2.24□□□□□ -2.05
LDB3O75112 RNU6-1199P-201ENST00000411249 104 ntBASIC2.24□□□□□ -2.05
LDB3O75112 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.24□□□□□ -2.05
LDB3O75112 MTCO1P5-201ENST00000433573 344 ntBASIC2.24□□□□□ -2.05
LDB3O75112 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.24□□□□□ -2.05
LDB3O75112 CYP2C59P-201ENST00000457790 269 ntBASIC2.24□□□□□ -2.05
LDB3O75112 SEPT14P8-201ENST00000508026 178 ntBASIC2.24□□□□□ -2.05
LDB3O75112 RNU2-31P-201ENST00000516954 155 ntBASIC2.24□□□□□ -2.05
LDB3O75112 RNU6-586P-201ENST00000517265 104 ntBASIC2.24□□□□□ -2.05
LDB3O75112 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.24□□□□□ -2.05
LDB3O75112 AC026470.2-201ENST00000561492 181 ntBASIC2.24□□□□□ -2.05
LDB3O75112 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.24□□□□□ -2.05
LDB3O75112 MIR1291-201ENST00000627649 87 ntBASIC2.24□□□□□ -2.05
LDB3O75112 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.24□□□□□ -2.05
LDB3O75112 MTND5P35-201ENST00000557537 1720 ntBASIC2.24□□□□□ -2.05
LDB3O75112 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LDB3O75112 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LDB3O75112 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LDB3O75112 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.24□□□□□ -2.05
LDB3O75112 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LDB3O75112 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.23□□□□□ -2.05
LDB3O75112 MIR21-201ENST00000362134 72 ntBASIC2.23□□□□□ -2.05
LDB3O75112 RNU4-82P-201ENST00000362443 140 ntBASIC2.23□□□□□ -2.05
LDB3O75112 RNU6-774P-201ENST00000363238 107 ntBASIC2.23□□□□□ -2.05
LDB3O75112 Y_RNA.331-201ENST00000365267 102 ntBASIC2.23□□□□□ -2.05
LDB3O75112 RNU1-51P-201ENST00000365345 176 ntBASIC2.23□□□□□ -2.05
LDB3O75112 RNA5SP240-201ENST00000365355 128 ntBASIC2.23□□□□□ -2.05
LDB3O75112 RNU6-326P-201ENST00000365480 107 ntBASIC2.23□□□□□ -2.05
LDB3O75112 RNU6-21P-201ENST00000384710 107 ntBASIC2.23□□□□□ -2.05
LDB3O75112 SNORA46.1-201ENST00000391069 153 ntBASIC2.23□□□□□ -2.05
LDB3O75112 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.23□□□□□ -2.05
LDB3O75112 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.23□□□□□ -2.05
LDB3O75112 AC090515.1-201ENST00000465295 476 ntBASIC2.23□□□□□ -2.05
LDB3O75112 AC091959.1-201ENST00000495857 238 ntBASIC2.23□□□□□ -2.05
LDB3O75112 AC074198.2-201ENST00000508153 258 ntBASIC2.23□□□□□ -2.05
LDB3O75112 AC024405.2-202ENST00000532731 184 ntBASIC2.23□□□□□ -2.05
LDB3O75112 CBX3P4-201ENST00000538909 354 ntBASIC2.23□□□□□ -2.05
LDB3O75112 AC018448.1-201ENST00000552843 316 ntBASIC2.23□□□□□ -2.05
LDB3O75112 AC103810.6-201ENST00000606708 136 ntBASIC2.23□□□□□ -2.05
LDB3O75112 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.23□□□□□ -2.05
LDB3O75112 AC091932.3-201ENST00000624223 323 ntBASIC2.23□□□□□ -2.05
LDB3O75112 BX322639.1-202ENST00000423987 2213 ntBASIC2.22□□□□□ -2.05
LDB3O75112 MIR411-201ENST00000362239 96 ntBASIC2.22□□□□□ -2.05
LDB3O75112 Y_RNA.29-201ENST00000362570 113 ntBASIC2.22□□□□□ -2.05
LDB3O75112 Y_RNA.83-201ENST00000363005 113 ntBASIC2.22□□□□□ -2.05
LDB3O75112 Y_RNA.122-201ENST00000363331 96 ntBASIC2.22□□□□□ -2.05
LDB3O75112 Y_RNA.199-201ENST00000364014 102 ntBASIC2.22□□□□□ -2.05
LDB3O75112 RNY4P28-201ENST00000365281 93 ntBASIC2.22□□□□□ -2.05
LDB3O75112 Y_RNA.383-201ENST00000383855 97 ntBASIC2.22□□□□□ -2.05
LDB3O75112 Y_RNA.415-201ENST00000384012 112 ntBASIC2.22□□□□□ -2.05
LDB3O75112 RNU6-662P-201ENST00000384253 104 ntBASIC2.22□□□□□ -2.05
LDB3O75112 RNU6-886P-201ENST00000384319 105 ntBASIC2.22□□□□□ -2.05
LDB3O75112 Y_RNA.555-201ENST00000384673 110 ntBASIC2.22□□□□□ -2.05
LDB3O75112 SNORA12-201ENST00000391162 147 ntBASIC2.22□□□□□ -2.05
LDB3O75112 MIR320B2-201ENST00000408479 138 ntBASIC2.22□□□□□ -2.05
LDB3O75112 RNA5SP504-201ENST00000410676 117 ntBASIC2.22□□□□□ -2.05
LDB3O75112 RNU5A-5P-201ENST00000411054 116 ntBASIC2.22□□□□□ -2.05
LDB3O75112 Y_RNA.626-201ENST00000411288 95 ntBASIC2.22□□□□□ -2.05
LDB3O75112 RAB28P5-201ENST00000427490 651 ntBASIC2.22□□□□□ -2.05
LDB3O75112 AL161788.1-201ENST00000441805 169 ntBASIC2.22□□□□□ -2.05
LDB3O75112 CKS1BP2-201ENST00000497342 240 ntBASIC2.22□□□□□ -2.05
LDB3O75112 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.22□□□□□ -2.05
LDB3O75112 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.22□□□□□ -2.05
LDB3O75112 RNY3P16-201ENST00000516338 101 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms