Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.06□□□□□ -2.08
CACNA1FO60840 RNU6-91P-201ENST00000607774 107 ntBASIC2.06□□□□□ -2.08
CACNA1FO60840 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CACNA1FO60840 Y_RNA.164-201ENST00000363709 102 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 Y_RNA.238-201ENST00000364441 102 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 SUMO2P12-201ENST00000405924 140 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 RNU4-62P-201ENST00000410125 130 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 RNU6-321P-201ENST00000410912 106 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.05□□□□□ -2.08
CACNA1FO60840 PTGES3P4-201ENST00000426243 356 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 RPS15AP5-201ENST00000436276 388 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 LINC01399-202ENST00000458450 244 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 SNORA25.15-201ENST00000516487 89 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 MIR3128-201ENST00000581957 66 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 AL356157.2-201ENST00000605122 111 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 AL450472.1-202ENST00000637286 180 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CACNA1FO60840 AC080128.1-201ENST00000474389 1917 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 AC010329.5-201ENST00000623497 2174 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 AC092268.1-201ENST00000342691 405 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 snoU2_19.2-201ENST00000363024 80 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 Y_RNA.461-201ENST00000384263 103 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 RNU6-907P-201ENST00000390924 102 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 MIR190B-201ENST00000401119 79 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 AL445305.1-201ENST00000432577 575 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 GPM6BP3-201ENST00000442797 145 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 AC112771.1-201ENST00000463581 102 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 RPL31P41-201ENST00000477967 372 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 AC016632.1-201ENST00000503994 196 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 AC109329.1-201ENST00000518744 317 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 IGLV3-17-201ENST00000519099 244 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.05□□□□□ -2.08
CACNA1FO60840 AC010928.2-201ENST00000588017 287 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.05□□□□□ -2.08
CACNA1FO60840 AC073308.1-201ENST00000623696 305 ntBASIC2.05□□□□□ -2.08
CACNA1FO60840 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
CACNA1FO60840 RNU6-961P-201ENST00000363893 105 ntBASIC2.04□□□□□ -2.08
CACNA1FO60840 Y_RNA.380-201ENST00000365663 111 ntBASIC2.04□□□□□ -2.08
CACNA1FO60840 RNU6-245P-201ENST00000384020 107 ntBASIC2.04□□□□□ -2.08
CACNA1FO60840 RNU6-1072P-201ENST00000384703 107 ntBASIC2.04□□□□□ -2.08
CACNA1FO60840 RNU6-443P-201ENST00000384780 107 ntBASIC2.04□□□□□ -2.08
CACNA1FO60840 RPL23AP36-201ENST00000413895 458 ntBASIC2.04□□□□□ -2.08
CACNA1FO60840 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.04□□□□□ -2.08
CACNA1FO60840 RNU2-44P-201ENST00000516795 194 ntBASIC2.04□□□□□ -2.08
CACNA1FO60840 AC016256.1-201ENST00000547971 354 ntBASIC2.04□□□□□ -2.08
CACNA1FO60840 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.04□□□□□ -2.08
CACNA1FO60840 RPS29P30-201ENST00000600975 111 ntBASIC2.04□□□□□ -2.08
CACNA1FO60840 AL355877.2-201ENST00000603670 358 ntBASIC2.04□□□□□ -2.08
CACNA1FO60840 MIR7157-201ENST00000635801 60 ntBASIC2.04□□□□□ -2.08
CACNA1FO60840 RNU4-90P-201ENST00000362773 141 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 SNORD115-32-201ENST00000364079 82 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 Y_RNA.276-201ENST00000364732 109 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 RNU6-142P-201ENST00000384019 107 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 Y_RNA.439-201ENST00000384119 94 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 Y_RNA.504-201ENST00000384481 104 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 MIR32-201ENST00000384965 70 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 SNORD115-46-201ENST00000390982 71 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 RNA5SP390-201ENST00000410191 113 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 SNORD12B-201ENST00000410433 91 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 Y_RNA.602-201ENST00000410535 92 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.03□□□□□ -2.08
CACNA1FO60840 RNU6-1114P-201ENST00000516022 107 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 RNU6-928P-201ENST00000516876 104 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 RNA5SP54-201ENST00000516951 92 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 MIR5701-3-201ENST00000578890 82 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 MIR5701-1-201ENST00000585138 82 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.03□□□□□ -2.08
CACNA1FO60840 MIR5701-2-201ENST00000615634 82 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 WWP1P1-201ENST00000466609 2769 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.03□□□□□ -2.08
CACNA1FO60840 AC010889.1-201ENST00000566193 2666 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 RNU6-222P-201ENST00000362438 107 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 RNU5B-2P-201ENST00000363036 113 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 Y_RNA.118-201ENST00000363300 101 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 RNU6-1285P-201ENST00000363480 105 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 Y_RNA.257-201ENST00000364596 102 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 RNU6-318P-201ENST00000384283 103 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 RNU6-1026P-201ENST00000384465 108 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 MIR153-2-201ENST00000385225 87 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 MT-TR-201ENST00000387439 65 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 CBX3P9-201ENST00000402326 552 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 HMGN2P19-201ENST00000425149 265 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 RNU7-26P-201ENST00000458980 63 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 RPL39P38-201ENST00000467018 153 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 HMGB3P17-201ENST00000504195 649 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 SERF1AP1-201ENST00000514575 187 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 AC074133.1-201ENST00000515696 183 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 AC093023.1-201ENST00000547375 507 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 HSPE1P4-201ENST00000550617 308 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.03□□□□□ -2.08
CACNA1FO60840 MZT1P2-201ENST00000604387 248 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 AC010900.2-201ENST00000604508 210 ntBASIC2.03□□□□□ -2.08
CACNA1FO60840 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
CACNA1FO60840 LINC02555-201ENST00000563933 1951 ntBASIC2.03□□□□□ -2.09
CACNA1FO60840 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.02□□□□□ -2.09
CACNA1FO60840 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.02□□□□□ -2.09
CACNA1FO60840 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CACNA1FO60840 RNU6-212P-201ENST00000362642 104 ntBASIC2.02□□□□□ -2.09
CACNA1FO60840 RNU6-873P-201ENST00000363833 107 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms