Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 MIR5006-201ENST00000583027 110 ntBASIC-0.67□□□□□ -2.52
SSSCA1O60232 AL136221.1-201ENST00000621449 509 ntBASIC-0.67□□□□□ -2.52
SSSCA1O60232 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.67□□□□□ -2.52
SSSCA1O60232 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.67□□□□□ -2.52
SSSCA1O60232 MIRLET7C-201ENST00000362160 84 ntBASIC-0.68□□□□□ -2.52
SSSCA1O60232 RNU6-371P-201ENST00000364283 108 ntBASIC-0.68□□□□□ -2.52
SSSCA1O60232 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.68□□□□□ -2.52
SSSCA1O60232 MIR548L-201ENST00000408303 86 ntBASIC-0.68□□□□□ -2.52
SSSCA1O60232 MIR1912-201ENST00000410389 80 ntBASIC-0.68□□□□□ -2.52
SSSCA1O60232 AC008134.1-201ENST00000420943 193 ntBASIC-0.68□□□□□ -2.52
SSSCA1O60232 MTCO1P20-201ENST00000425366 358 ntBASIC-0.68□□□□□ -2.52
SSSCA1O60232 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-0.68□□□□□ -2.52
SSSCA1O60232 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.68□□□□□ -2.52
SSSCA1O60232 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.68□□□□□ -2.52
SSSCA1O60232 MIR4432-201ENST00000581823 84 ntBASIC-0.68□□□□□ -2.52
SSSCA1O60232 AC087685.1-201ENST00000587507 141 ntBASIC-0.68□□□□□ -2.52
SSSCA1O60232 MIR7107-201ENST00000611489 80 ntBASIC-0.68□□□□□ -2.52
SSSCA1O60232 AC012409.4-201ENST00000612923 249 ntBASIC-0.68□□□□□ -2.52
SSSCA1O60232 AC006504.8-201ENST00000621046 635 ntBASIC-0.68□□□□□ -2.52
SSSCA1O60232 RNA5SP48-201ENST00000363969 126 ntBASIC-0.69□□□□□ -2.52
SSSCA1O60232 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.69□□□□□ -2.52
SSSCA1O60232 RNU6-207P-201ENST00000384137 107 ntBASIC-0.69□□□□□ -2.52
SSSCA1O60232 MIR520C-201ENST00000385005 87 ntBASIC-0.69□□□□□ -2.52
SSSCA1O60232 MT-TQ-201ENST00000387372 72 ntBASIC-0.69□□□□□ -2.52
SSSCA1O60232 AL049545.1-201ENST00000401856 572 ntBASIC-0.69□□□□□ -2.52
SSSCA1O60232 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.69□□□□□ -2.52
SSSCA1O60232 AC012306.1-201ENST00000423267 114 ntBASIC-0.69□□□□□ -2.52
SSSCA1O60232 AC133104.1-201ENST00000429100 218 ntBASIC-0.69□□□□□ -2.52
SSSCA1O60232 AC004386.2-201ENST00000441858 148 ntBASIC-0.69□□□□□ -2.52
SSSCA1O60232 MTND3P25-201ENST00000509243 135 ntBASIC-0.69□□□□□ -2.52
SSSCA1O60232 MTCO3P27-201ENST00000514397 196 ntBASIC-0.69□□□□□ -2.52
SSSCA1O60232 RNU6-897P-201ENST00000517135 105 ntBASIC-0.69□□□□□ -2.52
SSSCA1O60232 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.69□□□□□ -2.52
SSSCA1O60232 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.69□□□□□ -2.52
SSSCA1O60232 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.69□□□□□ -2.52
SSSCA1O60232 AC012433.1-201ENST00000588916 398 ntBASIC-0.69□□□□□ -2.52
SSSCA1O60232 AC008608.1-201ENST00000603910 127 ntBASIC-0.69□□□□□ -2.52
SSSCA1O60232 AC108676.2-201ENST00000605225 163 ntBASIC-0.69□□□□□ -2.52
SSSCA1O60232 AC246785.4-201ENST00000605374 287 ntBASIC-0.69□□□□□ -2.52
SSSCA1O60232 AC005592.1-201ENST00000566527 1640 ntBASIC-0.69□□□□□ -2.52
SSSCA1O60232 RNU6-428P-201ENST00000362942 107 ntBASIC-0.7□□□□□ -2.52
SSSCA1O60232 RNU6-354P-201ENST00000383862 107 ntBASIC-0.7□□□□□ -2.52
SSSCA1O60232 RNU6-610P-201ENST00000384264 107 ntBASIC-0.7□□□□□ -2.52
SSSCA1O60232 MTND3P20-201ENST00000407663 186 ntBASIC-0.7□□□□□ -2.52
SSSCA1O60232 Z95118.1-201ENST00000421372 247 ntBASIC-0.7□□□□□ -2.52
SSSCA1O60232 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.7□□□□□ -2.52
SSSCA1O60232 AC079354.2-201ENST00000453523 154 ntBASIC-0.7□□□□□ -2.52
SSSCA1O60232 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.7□□□□□ -2.52
SSSCA1O60232 RPL39P34-201ENST00000477141 156 ntBASIC-0.7□□□□□ -2.52
SSSCA1O60232 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-0.7□□□□□ -2.52
SSSCA1O60232 RNU2-10P-201ENST00000516375 211 ntBASIC-0.7□□□□□ -2.52
SSSCA1O60232 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC-0.7□□□□□ -2.52
SSSCA1O60232 MIR4636-201ENST00000582271 80 ntBASIC-0.7□□□□□ -2.52
SSSCA1O60232 AC020891.4-201ENST00000605745 93 ntBASIC-0.7□□□□□ -2.52
SSSCA1O60232 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.7□□□□□ -2.52
SSSCA1O60232 AC016911.1-201ENST00000613297 452 ntBASIC-0.7□□□□□ -2.52
SSSCA1O60232 FAM157A-202ENST00000615155 405 ntBASIC-0.7□□□□□ -2.52
SSSCA1O60232 AC008250.2-201ENST00000615261 205 ntBASIC-0.7□□□□□ -2.52
SSSCA1O60232 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.7□□□□□ -2.52
SSSCA1O60232 U6.73-201ENST00000619194 103 ntBASIC-0.7□□□□□ -2.52
SSSCA1O60232 snoZ196.1-201ENST00000625269 89 ntBASIC-0.7□□□□□ -2.52
SSSCA1O60232 SNORD49B-201ENST00000365172 72 ntBASIC-0.71□□□□□ -2.52
SSSCA1O60232 RNU6-25P-201ENST00000383873 107 ntBASIC-0.71□□□□□ -2.52
SSSCA1O60232 RNU6-48P-201ENST00000384161 107 ntBASIC-0.71□□□□□ -2.52
SSSCA1O60232 RNU6-15P-201ENST00000384534 107 ntBASIC-0.71□□□□□ -2.52
SSSCA1O60232 RNU6-29P-201ENST00000384637 107 ntBASIC-0.71□□□□□ -2.52
SSSCA1O60232 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-0.71□□□□□ -2.52
SSSCA1O60232 CALM2P2-201ENST00000428512 440 ntBASIC-0.71□□□□□ -2.52
SSSCA1O60232 SNAP23P1-201ENST00000433229 246 ntBASIC-0.71□□□□□ -2.52
SSSCA1O60232 SUMO1P2-201ENST00000452524 304 ntBASIC-0.71□□□□□ -2.52
SSSCA1O60232 AC008628.2-201ENST00000502605 298 ntBASIC-0.71□□□□□ -2.52
SSSCA1O60232 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-0.71□□□□□ -2.52
SSSCA1O60232 RNU6-180P-201ENST00000516697 61 ntBASIC-0.71□□□□□ -2.52
SSSCA1O60232 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.71□□□□□ -2.52
SSSCA1O60232 MIR5692A1-201ENST00000580523 69 ntBASIC-0.71□□□□□ -2.52
SSSCA1O60232 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.71□□□□□ -2.52
SSSCA1O60232 MIR6779-201ENST00000617283 64 ntBASIC-0.71□□□□□ -2.52
SSSCA1O60232 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.72□□□□□ -2.52
SSSCA1O60232 SNORA25.7-201ENST00000364375 127 ntBASIC-0.72□□□□□ -2.52
SSSCA1O60232 MIR586-201ENST00000385035 97 ntBASIC-0.72□□□□□ -2.52
SSSCA1O60232 MIR625-201ENST00000385047 85 ntBASIC-0.72□□□□□ -2.52
SSSCA1O60232 MTCO2P8-201ENST00000412213 658 ntBASIC-0.72□□□□□ -2.52
SSSCA1O60232 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-0.72□□□□□ -2.52
SSSCA1O60232 RPL17P19-201ENST00000489069 552 ntBASIC-0.72□□□□□ -2.52
SSSCA1O60232 RNU6-848P-201ENST00000515948 107 ntBASIC-0.72□□□□□ -2.52
SSSCA1O60232 RNU6-617P-201ENST00000516147 107 ntBASIC-0.72□□□□□ -2.52
SSSCA1O60232 RNU6-473P-201ENST00000516164 107 ntBASIC-0.72□□□□□ -2.52
SSSCA1O60232 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.72□□□□□ -2.52
SSSCA1O60232 AP001372.4-201ENST00000524889 472 ntBASIC-0.72□□□□□ -2.52
SSSCA1O60232 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.72□□□□□ -2.52
SSSCA1O60232 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.72□□□□□ -2.52
SSSCA1O60232 LRRC34P1-201ENST00000542742 915 ntBASIC-0.72□□□□□ -2.52
SSSCA1O60232 AC138869.1-201ENST00000568623 124 ntBASIC-0.72□□□□□ -2.52
SSSCA1O60232 MIR4771-2-201ENST00000577758 74 ntBASIC-0.72□□□□□ -2.52
SSSCA1O60232 MIR4752-201ENST00000579672 72 ntBASIC-0.72□□□□□ -2.52
SSSCA1O60232 MIR4771-1-201ENST00000582617 74 ntBASIC-0.72□□□□□ -2.52
SSSCA1O60232 MIR4676-201ENST00000583078 72 ntBASIC-0.72□□□□□ -2.52
SSSCA1O60232 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.73□□□□□ -2.53
SSSCA1O60232 RNU6-613P-201ENST00000410412 108 ntBASIC-0.73□□□□□ -2.53
SSSCA1O60232 USP9YP25-201ENST00000457708 443 ntBASIC-0.73□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms