Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 MIR4300-201ENST00000581016 96 ntBASIC2.36□□□□□ -2.03
MSI1O43347 MIR4503-201ENST00000582187 83 ntBASIC2.36□□□□□ -2.03
MSI1O43347 MIR6766-201ENST00000622641 72 ntBASIC2.36□□□□□ -2.03
MSI1O43347 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
MSI1O43347 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.36□□□□□ -2.03
MSI1O43347 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
MSI1O43347 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.36□□□□□ -2.03
MSI1O43347 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
MSI1O43347 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
MSI1O43347 RNU6-545P-201ENST00000362681 104 ntBASIC2.35□□□□□ -2.03
MSI1O43347 RNU6-937P-201ENST00000384325 106 ntBASIC2.35□□□□□ -2.03
MSI1O43347 MIR221-201ENST00000385135 110 ntBASIC2.35□□□□□ -2.03
MSI1O43347 AC007064.1-201ENST00000412238 351 ntBASIC2.35□□□□□ -2.03
MSI1O43347 RAB28P5-201ENST00000427490 651 ntBASIC2.35□□□□□ -2.03
MSI1O43347 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.35□□□□□ -2.03
MSI1O43347 RNU7-14P-201ENST00000459331 62 ntBASIC2.35□□□□□ -2.03
MSI1O43347 RNU6-625P-201ENST00000459412 107 ntBASIC2.35□□□□□ -2.03
MSI1O43347 AC098869.1-201ENST00000481627 292 ntBASIC2.35□□□□□ -2.03
MSI1O43347 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.35□□□□□ -2.03
MSI1O43347 AC074133.1-201ENST00000515696 183 ntBASIC2.35□□□□□ -2.03
MSI1O43347 RNU6-991P-201ENST00000516168 107 ntBASIC2.35□□□□□ -2.03
MSI1O43347 Y_RNA.713-201ENST00000517013 96 ntBASIC2.35□□□□□ -2.03
MSI1O43347 IGKV3-31-201ENST00000523109 329 ntBASIC2.35□□□□□ -2.03
MSI1O43347 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.35□□□□□ -2.03
MSI1O43347 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.35□□□□□ -2.03
MSI1O43347 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.35□□□□□ -2.03
MSI1O43347 AL449363.1-201ENST00000617815 186 ntBASIC2.35□□□□□ -2.03
MSI1O43347 7SK.10-201ENST00000621414 298 ntBASIC2.35□□□□□ -2.03
MSI1O43347 ZNF658B-202ENST00000615961 3375 ntBASIC2.35□□□□□ -2.03
MSI1O43347 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
MSI1O43347 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.34□□□□□ -2.03
MSI1O43347 AC005336.3-201ENST00000623833 2679 ntBASIC2.34□□□□□ -2.03
MSI1O43347 RNU6-20P-201ENST00000384106 107 ntBASIC2.34□□□□□ -2.03
MSI1O43347 RNU6-196P-201ENST00000384315 107 ntBASIC2.34□□□□□ -2.03
MSI1O43347 MIR144-201ENST00000384886 86 ntBASIC2.34□□□□□ -2.03
MSI1O43347 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.34□□□□□ -2.03
MSI1O43347 SNORD115-46-201ENST00000390982 71 ntBASIC2.34□□□□□ -2.03
MSI1O43347 HMGN2P9-201ENST00000476875 229 ntBASIC2.34□□□□□ -2.03
MSI1O43347 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.34□□□□□ -2.03
MSI1O43347 MIR5194-201ENST00000582634 120 ntBASIC2.34□□□□□ -2.03
MSI1O43347 MIR376A1-201ENST00000616574 68 ntBASIC2.34□□□□□ -2.03
MSI1O43347 MIR8062-201ENST00000621515 85 ntBASIC2.34□□□□□ -2.03
MSI1O43347 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
MSI1O43347 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
MSI1O43347 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.33□□□□□ -2.04
MSI1O43347 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
MSI1O43347 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
MSI1O43347 LINC02555-201ENST00000563933 1951 ntBASIC2.33□□□□□ -2.04
MSI1O43347 RNU6-626P-201ENST00000363354 107 ntBASIC2.33□□□□□ -2.04
MSI1O43347 RNU6-743P-201ENST00000364151 106 ntBASIC2.33□□□□□ -2.04
MSI1O43347 RNU6-472P-201ENST00000384299 107 ntBASIC2.33□□□□□ -2.04
MSI1O43347 MIR586-201ENST00000385035 97 ntBASIC2.33□□□□□ -2.04
MSI1O43347 RN7SKP223-201ENST00000410582 62 ntBASIC2.33□□□□□ -2.04
MSI1O43347 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.33□□□□□ -2.04
MSI1O43347 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.33□□□□□ -2.04
MSI1O43347 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.33□□□□□ -2.04
MSI1O43347 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.33□□□□□ -2.04
MSI1O43347 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.33□□□□□ -2.04
MSI1O43347 AL161670.1-201ENST00000554348 137 ntBASIC2.33□□□□□ -2.04
MSI1O43347 AL109918.3-201ENST00000603072 338 ntBASIC2.33□□□□□ -2.04
MSI1O43347 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.33□□□□□ -2.04
MSI1O43347 MIR7111-201ENST00000619751 72 ntBASIC2.33□□□□□ -2.04
MSI1O43347 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
MSI1O43347 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
MSI1O43347 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
MSI1O43347 snoU2_19.2-201ENST00000363024 80 ntBASIC2.32□□□□□ -2.04
MSI1O43347 RNU6-1305P-201ENST00000364353 104 ntBASIC2.32□□□□□ -2.04
MSI1O43347 SNORD31B-201ENST00000364977 69 ntBASIC2.32□□□□□ -2.04
MSI1O43347 SNORA25B-201ENST00000365507 128 ntBASIC2.32□□□□□ -2.04
MSI1O43347 Y_RNA.396-201ENST00000383949 103 ntBASIC2.32□□□□□ -2.04
MSI1O43347 Y_RNA.462-201ENST00000384268 102 ntBASIC2.32□□□□□ -2.04
MSI1O43347 Y_RNA.498-201ENST00000384460 102 ntBASIC2.32□□□□□ -2.04
MSI1O43347 RNU6-1072P-201ENST00000384703 107 ntBASIC2.32□□□□□ -2.04
MSI1O43347 Y_RNA.570-201ENST00000384750 101 ntBASIC2.32□□□□□ -2.04
MSI1O43347 RNU6-443P-201ENST00000384780 107 ntBASIC2.32□□□□□ -2.04
MSI1O43347 MIR215-201ENST00000384858 110 ntBASIC2.32□□□□□ -2.04
MSI1O43347 MIR561-201ENST00000385216 97 ntBASIC2.32□□□□□ -2.04
MSI1O43347 MIR548B-201ENST00000385247 97 ntBASIC2.32□□□□□ -2.04
MSI1O43347 MIR1283-1-201ENST00000408494 87 ntBASIC2.32□□□□□ -2.04
MSI1O43347 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.32□□□□□ -2.04
MSI1O43347 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.32□□□□□ -2.04
MSI1O43347 HMGN2P18-201ENST00000450680 270 ntBASIC2.32□□□□□ -2.04
MSI1O43347 AC016925.1-201ENST00000458303 298 ntBASIC2.32□□□□□ -2.04
MSI1O43347 RNU6-966P-201ENST00000516479 104 ntBASIC2.32□□□□□ -2.04
MSI1O43347 RNU6-667P-201ENST00000517186 102 ntBASIC2.32□□□□□ -2.04
MSI1O43347 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.32□□□□□ -2.04
MSI1O43347 AP003733.2-201ENST00000529409 171 ntBASIC2.32□□□□□ -2.04
MSI1O43347 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.32□□□□□ -2.04
MSI1O43347 AC121758.2-201ENST00000553271 193 ntBASIC2.32□□□□□ -2.04
MSI1O43347 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.32□□□□□ -2.04
MSI1O43347 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.32□□□□□ -2.04
MSI1O43347 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.32□□□□□ -2.04
MSI1O43347 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
MSI1O43347 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.32□□□□□ -2.04
MSI1O43347 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
MSI1O43347 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.31□□□□□ -2.04
MSI1O43347 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
MSI1O43347 MIR410-201ENST00000362222 80 ntBASIC2.31□□□□□ -2.04
MSI1O43347 Y_RNA.376-201ENST00000365638 108 ntBASIC2.31□□□□□ -2.04
MSI1O43347 SNORD63-201ENST00000384262 68 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms