Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 RNA5SP180-201ENST00000516181 101 ntBASIC-1.34□□□□□ -2.62
LINC01546A6NGU7 RNU6-1291P-201ENST00000516591 104 ntBASIC-1.34□□□□□ -2.62
LINC01546A6NGU7 RNU6-572P-201ENST00000516724 80 ntBASIC-1.34□□□□□ -2.62
LINC01546A6NGU7 RNU6-1098P-201ENST00000516772 96 ntBASIC-1.34□□□□□ -2.62
LINC01546A6NGU7 AC026421.1-201ENST00000519101 163 ntBASIC-1.34□□□□□ -2.62
LINC01546A6NGU7 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-1.34□□□□□ -2.62
LINC01546A6NGU7 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-1.34□□□□□ -2.62
LINC01546A6NGU7 AC004223.4-201ENST00000612426 332 ntBASIC-1.34□□□□□ -2.62
LINC01546A6NGU7 AC104260.1-201ENST00000616660 539 ntBASIC-1.34□□□□□ -2.62
LINC01546A6NGU7 ZNF204P-201ENST00000416749 2397 ntBASIC-1.35□□□□□ -2.63
LINC01546A6NGU7 RNU6-490P-201ENST00000362985 107 ntBASIC-1.35□□□□□ -2.63
LINC01546A6NGU7 RNU4-28P-201ENST00000364739 141 ntBASIC-1.35□□□□□ -2.63
LINC01546A6NGU7 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.35□□□□□ -2.63
LINC01546A6NGU7 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.35□□□□□ -2.63
LINC01546A6NGU7 Y_RNA.453-201ENST00000384223 109 ntBASIC-1.35□□□□□ -2.63
LINC01546A6NGU7 MIR520C-201ENST00000385005 87 ntBASIC-1.35□□□□□ -2.63
LINC01546A6NGU7 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-1.35□□□□□ -2.63
LINC01546A6NGU7 RNA5SP390-201ENST00000410191 113 ntBASIC-1.35□□□□□ -2.63
LINC01546A6NGU7 AC016831.2-201ENST00000417179 352 ntBASIC-1.35□□□□□ -2.63
LINC01546A6NGU7 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-1.35□□□□□ -2.63
LINC01546A6NGU7 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.35□□□□□ -2.63
LINC01546A6NGU7 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-1.35□□□□□ -2.63
LINC01546A6NGU7 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.35□□□□□ -2.63
LINC01546A6NGU7 AL122001.1-201ENST00000457027 370 ntBASIC-1.35□□□□□ -2.63
LINC01546A6NGU7 TMEM251P1-201ENST00000503717 318 ntBASIC-1.35□□□□□ -2.63
LINC01546A6NGU7 RNU6-1069P-201ENST00000516612 133 ntBASIC-1.35□□□□□ -2.63
LINC01546A6NGU7 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC-1.35□□□□□ -2.63
LINC01546A6NGU7 AC012507.3-201ENST00000603556 477 ntBASIC-1.35□□□□□ -2.63
LINC01546A6NGU7 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-1.35□□□□□ -2.63
LINC01546A6NGU7 AC112487.2-201ENST00000637950 304 ntBASIC-1.35□□□□□ -2.63
LINC01546A6NGU7 MTND5P18-201ENST00000445624 1801 ntBASIC-1.36□□□□□ -2.63
LINC01546A6NGU7 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.36□□□□□ -2.63
LINC01546A6NGU7 RNU6-455P-201ENST00000384681 107 ntBASIC-1.36□□□□□ -2.63
LINC01546A6NGU7 MIR517B-201ENST00000385102 67 ntBASIC-1.36□□□□□ -2.63
LINC01546A6NGU7 RNA5SP475-201ENST00000410568 110 ntBASIC-1.36□□□□□ -2.63
LINC01546A6NGU7 RPS3AP3-201ENST00000411933 242 ntBASIC-1.36□□□□□ -2.63
LINC01546A6NGU7 SNX3P1X-201ENST00000414887 175 ntBASIC-1.36□□□□□ -2.63
LINC01546A6NGU7 USP9YP21-201ENST00000420603 432 ntBASIC-1.36□□□□□ -2.63
LINC01546A6NGU7 AL354692.1-201ENST00000423044 315 ntBASIC-1.36□□□□□ -2.63
LINC01546A6NGU7 MTCYBP5-201ENST00000423752 1135 ntBASIC-1.36□□□□□ -2.63
LINC01546A6NGU7 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-1.36□□□□□ -2.63
LINC01546A6NGU7 RNU6-469P-201ENST00000516253 101 ntBASIC-1.36□□□□□ -2.63
LINC01546A6NGU7 AC006600.1-201ENST00000572529 153 ntBASIC-1.36□□□□□ -2.63
LINC01546A6NGU7 SNORD92-201ENST00000585078 85 ntBASIC-1.36□□□□□ -2.63
LINC01546A6NGU7 BNIP3P24-201ENST00000593398 557 ntBASIC-1.36□□□□□ -2.63
LINC01546A6NGU7 U7.6-201ENST00000610841 64 ntBASIC-1.36□□□□□ -2.63
LINC01546A6NGU7 AC016597.2-201ENST00000613256 341 ntBASIC-1.36□□□□□ -2.63
LINC01546A6NGU7 AC092656.1-203ENST00000624134 423 ntBASIC-1.36□□□□□ -2.63
LINC01546A6NGU7 AL008636.1-201ENST00000625038 1018 ntBASIC-1.36□□□□□ -2.63
LINC01546A6NGU7 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC-1.36□□□□□ -2.63
LINC01546A6NGU7 SNORD115-42-201ENST00000364273 82 ntBASIC-1.37□□□□□ -2.63
LINC01546A6NGU7 Y_RNA.376-201ENST00000365638 108 ntBASIC-1.37□□□□□ -2.63
LINC01546A6NGU7 SNORD56B-201ENST00000384713 71 ntBASIC-1.37□□□□□ -2.63
LINC01546A6NGU7 RNU6-817P-201ENST00000391083 104 ntBASIC-1.37□□□□□ -2.63
LINC01546A6NGU7 MIR1285-2-201ENST00000408311 88 ntBASIC-1.37□□□□□ -2.63
LINC01546A6NGU7 AL365338.1-201ENST00000422282 858 ntBASIC-1.37□□□□□ -2.63
LINC01546A6NGU7 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.37□□□□□ -2.63
LINC01546A6NGU7 HSFY7P-201ENST00000432672 318 ntBASIC-1.37□□□□□ -2.63
LINC01546A6NGU7 HSFY8P-201ENST00000437934 318 ntBASIC-1.37□□□□□ -2.63
LINC01546A6NGU7 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.37□□□□□ -2.63
LINC01546A6NGU7 LARP7P2-201ENST00000575306 125 ntBASIC-1.37□□□□□ -2.63
LINC01546A6NGU7 MIR3179-1-201ENST00000578940 84 ntBASIC-1.37□□□□□ -2.63
LINC01546A6NGU7 MIR3179-2-201ENST00000579107 84 ntBASIC-1.37□□□□□ -2.63
LINC01546A6NGU7 MIR3179-3-201ENST00000579566 84 ntBASIC-1.37□□□□□ -2.63
LINC01546A6NGU7 AC138207.3-201ENST00000585289 166 ntBASIC-1.37□□□□□ -2.63
LINC01546A6NGU7 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-1.37□□□□□ -2.63
LINC01546A6NGU7 AC135803.1-201ENST00000608748 565 ntBASIC-1.37□□□□□ -2.63
LINC01546A6NGU7 AC010999.1-201ENST00000611856 324 ntBASIC-1.37□□□□□ -2.63
LINC01546A6NGU7 AC008250.2-201ENST00000615261 205 ntBASIC-1.37□□□□□ -2.63
LINC01546A6NGU7 MIR6851-201ENST00000617060 67 ntBASIC-1.37□□□□□ -2.63
LINC01546A6NGU7 MIR3179-4-201ENST00000617599 84 ntBASIC-1.37□□□□□ -2.63
LINC01546A6NGU7 AC005562.2-201ENST00000618264 111 ntBASIC-1.37□□□□□ -2.63
LINC01546A6NGU7 Y_RNA.25-201ENST00000362528 102 ntBASIC-1.38□□□□□ -2.63
LINC01546A6NGU7 Y_RNA.203-201ENST00000364106 102 ntBASIC-1.38□□□□□ -2.63
LINC01546A6NGU7 SNORA63C-201ENST00000364578 129 ntBASIC-1.38□□□□□ -2.63
LINC01546A6NGU7 SNORD115-44-201ENST00000365391 82 ntBASIC-1.38□□□□□ -2.63
LINC01546A6NGU7 SNORA1-201ENST00000384107 130 ntBASIC-1.38□□□□□ -2.63
LINC01546A6NGU7 RNU6-364P-201ENST00000384387 107 ntBASIC-1.38□□□□□ -2.63
LINC01546A6NGU7 SNORD28-201ENST00000384706 75 ntBASIC-1.38□□□□□ -2.63
LINC01546A6NGU7 MIR9-2-201ENST00000384838 87 ntBASIC-1.38□□□□□ -2.63
LINC01546A6NGU7 MIR601-201ENST00000385256 79 ntBASIC-1.38□□□□□ -2.63
LINC01546A6NGU7 MIR2115-201ENST00000516657 100 ntBASIC-1.38□□□□□ -2.63
LINC01546A6NGU7 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-1.38□□□□□ -2.63
LINC01546A6NGU7 AC091135.1-201ENST00000585943 307 ntBASIC-1.38□□□□□ -2.63
LINC01546A6NGU7 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.39□□□□□ -2.63
LINC01546A6NGU7 Y_RNA.132-201ENST00000363421 102 ntBASIC-1.39□□□□□ -2.63
LINC01546A6NGU7 RNU6-1097P-201ENST00000363586 107 ntBASIC-1.39□□□□□ -2.63
LINC01546A6NGU7 MIR215-201ENST00000384858 110 ntBASIC-1.39□□□□□ -2.63
LINC01546A6NGU7 RNU6-932P-201ENST00000391108 106 ntBASIC-1.39□□□□□ -2.63
LINC01546A6NGU7 AC114491.1-201ENST00000416095 246 ntBASIC-1.39□□□□□ -2.63
LINC01546A6NGU7 HIGD1AP15-201ENST00000416198 280 ntBASIC-1.39□□□□□ -2.63
LINC01546A6NGU7 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC-1.39□□□□□ -2.63
LINC01546A6NGU7 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.39□□□□□ -2.63
LINC01546A6NGU7 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.39□□□□□ -2.63
LINC01546A6NGU7 MTCO3P15-201ENST00000526563 574 ntBASIC-1.39□□□□□ -2.63
LINC01546A6NGU7 AC099654.9-201ENST00000637055 678 ntBASIC-1.39□□□□□ -2.63
LINC01546A6NGU7 RNU6-543P-201ENST00000362576 108 ntBASIC-1.4□□□□□ -2.63
LINC01546A6NGU7 RNU6-226P-201ENST00000363778 107 ntBASIC-1.4□□□□□ -2.63
LINC01546A6NGU7 RNA5SP48-201ENST00000363969 126 ntBASIC-1.4□□□□□ -2.63
LINC01546A6NGU7 MIR147A-201ENST00000385079 72 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms