Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 CYP2C61P-201ENST00000604072 290 ntBASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 MZT1P2-201ENST00000604387 248 ntBASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 AC006001.4-201ENST00000622243 395 ntBASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 AC091895.1-201ENST00000624494 256 ntBASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 AL669831.3-213ENST00000636676 183 ntBASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 RNY1P16-201ENST00000363063 111 ntBASIC1.3□□□□□ -2.2
NKX2-6A6NCS4 SNORA72.1-201ENST00000363485 129 ntBASIC1.3□□□□□ -2.2
NKX2-6A6NCS4 SNORD115-32-201ENST00000364079 82 ntBASIC1.3□□□□□ -2.2
NKX2-6A6NCS4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
NKX2-6A6NCS4 Y_RNA.474-201ENST00000384341 102 ntBASIC1.3□□□□□ -2.2
NKX2-6A6NCS4 SNORA8-201ENST00000384574 139 ntBASIC1.3□□□□□ -2.2
NKX2-6A6NCS4 MIR489-201ENST00000384923 84 ntBASIC1.3□□□□□ -2.2
NKX2-6A6NCS4 MIR10B-201ENST00000385011 110 ntBASIC1.3□□□□□ -2.2
NKX2-6A6NCS4 RNU6-159P-201ENST00000391080 106 ntBASIC1.3□□□□□ -2.2
NKX2-6A6NCS4 Y_RNA.646-201ENST00000410980 101 ntBASIC1.3□□□□□ -2.2
NKX2-6A6NCS4 RNU6-57P-201ENST00000411348 103 ntBASIC1.3□□□□□ -2.2
NKX2-6A6NCS4 RPL23AP50-201ENST00000434149 455 ntBASIC1.3□□□□□ -2.2
NKX2-6A6NCS4 AL357134.1-201ENST00000445848 426 ntBASIC1.3□□□□□ -2.2
NKX2-6A6NCS4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.3□□□□□ -2.2
NKX2-6A6NCS4 AC091179.3-201ENST00000474761 144 ntBASIC1.3□□□□□ -2.2
NKX2-6A6NCS4 AC010409.1-201ENST00000487382 476 ntBASIC1.3□□□□□ -2.2
NKX2-6A6NCS4 Y_RNA.691-201ENST00000516611 103 ntBASIC1.3□□□□□ -2.2
NKX2-6A6NCS4 AC105029.1-201ENST00000520250 669 ntBASIC1.3□□□□□ -2.2
NKX2-6A6NCS4 APOOP3-201ENST00000536787 586 ntBASIC1.3□□□□□ -2.2
NKX2-6A6NCS4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.3□□□□□ -2.2
NKX2-6A6NCS4 RPL17P51-201ENST00000605218 238 ntBASIC1.3□□□□□ -2.2
NKX2-6A6NCS4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.3□□□□□ -2.2
NKX2-6A6NCS4 MIR6504-201ENST00000613520 61 ntBASIC1.3□□□□□ -2.2
NKX2-6A6NCS4 PISRT1.1-201ENST00000616930 107 ntBASIC1.3□□□□□ -2.2
NKX2-6A6NCS4 AC126177.8-201ENST00000618339 1015 ntBASIC1.3□□□□□ -2.2
NKX2-6A6NCS4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
NKX2-6A6NCS4 MTND5P16-201ENST00000460269 1703 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 SNORA33-201ENST00000363664 130 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 Y_RNA.796-201ENST00000364268 102 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 Y_RNA.799-201ENST00000364992 102 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 RNU6-975P-201ENST00000384296 105 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 MIR548B-201ENST00000385247 97 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 MIR320A-201ENST00000385302 82 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 SNORA48.1-201ENST00000390879 135 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 MIR300-201ENST00000401138 83 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 RNA5SP100-201ENST00000410903 110 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 RNA5SP59-201ENST00000410922 110 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 MTND2P29-201ENST00000438595 412 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 RNU1-131P-201ENST00000458943 161 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 RNU7-57P-201ENST00000459540 60 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 AC023790.1-201ENST00000482174 347 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 AC091951.2-201ENST00000500762 203 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 7SK.7-201ENST00000603504 247 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 MIR1244-1-201ENST00000612829 85 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 AL353770.2-201ENST00000620024 78 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 MIR1244-3-201ENST00000635744 85 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 MTND4LP32-201ENST00000636111 270 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 MIR1244-2-201ENST00000636449 85 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 AC099654.5-201ENST00000636479 350 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 MIR1244-4-202ENST00000636813 85 ntBASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
NKX2-6A6NCS4 Y_RNA.142-201ENST00000363491 102 ntBASIC1.28□□□□□ -2.2
NKX2-6A6NCS4 Y_RNA.166-201ENST00000363730 102 ntBASIC1.28□□□□□ -2.2
NKX2-6A6NCS4 SNORD115-8-201ENST00000363856 82 ntBASIC1.28□□□□□ -2.2
NKX2-6A6NCS4 RNU6-99P-201ENST00000364721 107 ntBASIC1.28□□□□□ -2.2
NKX2-6A6NCS4 SNORD115-38-201ENST00000365037 82 ntBASIC1.28□□□□□ -2.2
NKX2-6A6NCS4 RNU6-439P-201ENST00000384188 106 ntBASIC1.28□□□□□ -2.2
NKX2-6A6NCS4 RNU6-310P-201ENST00000384655 107 ntBASIC1.28□□□□□ -2.2
NKX2-6A6NCS4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.28□□□□□ -2.2
NKX2-6A6NCS4 AC092423.1-201ENST00000430165 186 ntBASIC1.28□□□□□ -2.2
NKX2-6A6NCS4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.28□□□□□ -2.2
NKX2-6A6NCS4 MTCO3P10-201ENST00000455912 772 ntBASIC1.28□□□□□ -2.2
NKX2-6A6NCS4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.28□□□□□ -2.2
NKX2-6A6NCS4 AC011406.1-201ENST00000512440 370 ntBASIC1.28□□□□□ -2.2
NKX2-6A6NCS4 Y_RNA.706-201ENST00000516933 99 ntBASIC1.28□□□□□ -2.2
NKX2-6A6NCS4 RNA5SP54-201ENST00000516951 92 ntBASIC1.28□□□□□ -2.2
NKX2-6A6NCS4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.28□□□□□ -2.2
NKX2-6A6NCS4 AC134698.4-201ENST00000523451 826 ntBASIC1.28□□□□□ -2.2
NKX2-6A6NCS4 MIR5701-3-201ENST00000578890 82 ntBASIC1.28□□□□□ -2.2
NKX2-6A6NCS4 MIR5701-1-201ENST00000585138 82 ntBASIC1.28□□□□□ -2.2
NKX2-6A6NCS4 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
NKX2-6A6NCS4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.28□□□□□ -2.2
NKX2-6A6NCS4 MIR5701-2-201ENST00000615634 82 ntBASIC1.28□□□□□ -2.2
NKX2-6A6NCS4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.28□□□□□ -2.2
NKX2-6A6NCS4 AL078596.1-201ENST00000624856 447 ntBASIC1.28□□□□□ -2.2
NKX2-6A6NCS4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.28□□□□□ -2.2
NKX2-6A6NCS4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
NKX2-6A6NCS4 MTND5P10-201ENST00000603719 1809 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 Y_RNA.191-201ENST00000363972 113 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 RNY3P11-201ENST00000364153 102 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 RNU6-593P-201ENST00000364716 112 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 Y_RNA.358-201ENST00000365491 99 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 RNU6-281P-201ENST00000384212 103 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 Y_RNA.557-201ENST00000384680 107 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 MIR190B-201ENST00000401119 79 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms