Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TRIM43BA6NCK2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TRIM43BA6NCK2 RNU6-1309P-201ENST00000363305 108 ntBASIC2.59□□□□□ -1.99
TRIM43BA6NCK2 Y_RNA.183-201ENST00000363882 113 ntBASIC2.59□□□□□ -1.99
TRIM43BA6NCK2 Y_RNA.276-201ENST00000364732 109 ntBASIC2.59□□□□□ -1.99
TRIM43BA6NCK2 RNU6-1072P-201ENST00000384703 107 ntBASIC2.59□□□□□ -1.99
TRIM43BA6NCK2 RNU6-443P-201ENST00000384780 107 ntBASIC2.59□□□□□ -1.99
TRIM43BA6NCK2 RNA5SP504-201ENST00000410676 117 ntBASIC2.59□□□□□ -1.99
TRIM43BA6NCK2 AL137159.1-201ENST00000452808 512 ntBASIC2.59□□□□□ -1.99
TRIM43BA6NCK2 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.59□□□□□ -1.99
TRIM43BA6NCK2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.59□□□□□ -1.99
TRIM43BA6NCK2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.59□□□□□ -1.99
TRIM43BA6NCK2 RNU6-635P-201ENST00000516651 102 ntBASIC2.59□□□□□ -1.99
TRIM43BA6NCK2 RNU6-897P-201ENST00000517135 105 ntBASIC2.59□□□□□ -1.99
TRIM43BA6NCK2 RNU1-104P-201ENST00000517280 175 ntBASIC2.59□□□□□ -1.99
TRIM43BA6NCK2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM43BA6NCK2 AC008269.2-201ENST00000561915 1105 ntBASIC2.59□□□□□ -1.99
TRIM43BA6NCK2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM43BA6NCK2 MYL12BP1-201ENST00000569826 507 ntBASIC2.59□□□□□ -1.99
TRIM43BA6NCK2 MIR7111-201ENST00000619751 72 ntBASIC2.59□□□□□ -1.99
TRIM43BA6NCK2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
TRIM43BA6NCK2 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.59□□□□□ -1.99
TRIM43BA6NCK2 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.59□□□□□ -1.99
TRIM43BA6NCK2 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRIM43BA6NCK2 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.58□□□□□ -2
TRIM43BA6NCK2 U3.8-201ENST00000363675 217 ntBASIC2.58□□□□□ -2
TRIM43BA6NCK2 RNU6-1264P-201ENST00000383891 107 ntBASIC2.58□□□□□ -2
TRIM43BA6NCK2 SNORA67.2-201ENST00000384300 149 ntBASIC2.58□□□□□ -2
TRIM43BA6NCK2 SNORA67.3-201ENST00000384366 140 ntBASIC2.58□□□□□ -2
TRIM43BA6NCK2 SNORA80E-201ENST00000384744 137 ntBASIC2.58□□□□□ -2
TRIM43BA6NCK2 RNU2-48P-201ENST00000410694 191 ntBASIC2.58□□□□□ -2
TRIM43BA6NCK2 RNU6-130P-201ENST00000411112 103 ntBASIC2.58□□□□□ -2
TRIM43BA6NCK2 AC016925.1-201ENST00000458303 298 ntBASIC2.58□□□□□ -2
TRIM43BA6NCK2 RPL23AP42-201ENST00000471152 471 ntBASIC2.58□□□□□ -2
TRIM43BA6NCK2 HMGN2P9-201ENST00000476875 229 ntBASIC2.58□□□□□ -2
TRIM43BA6NCK2 RPL26P26-201ENST00000480251 434 ntBASIC2.58□□□□□ -2
TRIM43BA6NCK2 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.58□□□□□ -2
TRIM43BA6NCK2 RNU6-1143P-201ENST00000516125 104 ntBASIC2.58□□□□□ -2
TRIM43BA6NCK2 RNY3P15-201ENST00000516297 97 ntBASIC2.58□□□□□ -2
TRIM43BA6NCK2 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.58□□□□□ -2
TRIM43BA6NCK2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.58□□□□□ -2
TRIM43BA6NCK2 PRR13P7-201ENST00000605538 430 ntBASIC2.58□□□□□ -2
TRIM43BA6NCK2 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.58□□□□□ -2
TRIM43BA6NCK2 AC130454.1-201ENST00000622948 401 ntBASIC2.58□□□□□ -2
TRIM43BA6NCK2 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.57□□□□□ -2
TRIM43BA6NCK2 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TRIM43BA6NCK2 Y_RNA.140-201ENST00000363474 103 ntBASIC2.57□□□□□ -2
TRIM43BA6NCK2 Y_RNA.143-201ENST00000363520 106 ntBASIC2.57□□□□□ -2
TRIM43BA6NCK2 Y_RNA.149-201ENST00000363558 117 ntBASIC2.57□□□□□ -2
TRIM43BA6NCK2 Y_RNA.176-201ENST00000363815 109 ntBASIC2.57□□□□□ -2
TRIM43BA6NCK2 SNORA72.2-201ENST00000365028 127 ntBASIC2.57□□□□□ -2
TRIM43BA6NCK2 RNU6-1310P-201ENST00000384153 107 ntBASIC2.57□□□□□ -2
TRIM43BA6NCK2 RNU6-1105P-201ENST00000384774 107 ntBASIC2.57□□□□□ -2
TRIM43BA6NCK2 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.57□□□□□ -2
TRIM43BA6NCK2 MIR548F4-201ENST00000408515 105 ntBASIC2.57□□□□□ -2
TRIM43BA6NCK2 ELOCP21-201ENST00000412558 336 ntBASIC2.57□□□□□ -2
TRIM43BA6NCK2 AL358176.2-201ENST00000425769 204 ntBASIC2.57□□□□□ -2
TRIM43BA6NCK2 RAB28P5-201ENST00000427490 651 ntBASIC2.57□□□□□ -2
TRIM43BA6NCK2 TOMM22P2-201ENST00000430735 237 ntBASIC2.57□□□□□ -2
TRIM43BA6NCK2 NDUFB4P10-201ENST00000452541 359 ntBASIC2.57□□□□□ -2
TRIM43BA6NCK2 AC093259.1-201ENST00000509755 300 ntBASIC2.57□□□□□ -2
TRIM43BA6NCK2 SNORA4.4-201ENST00000515921 135 ntBASIC2.57□□□□□ -2
TRIM43BA6NCK2 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.57□□□□□ -2
TRIM43BA6NCK2 NDUFA5P6-201ENST00000542110 379 ntBASIC2.57□□□□□ -2
TRIM43BA6NCK2 PRELID2P1-201ENST00000552837 301 ntBASIC2.57□□□□□ -2
TRIM43BA6NCK2 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.57□□□□□ -2
TRIM43BA6NCK2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.57□□□□□ -2
TRIM43BA6NCK2 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.57□□□□□ -2
TRIM43BA6NCK2 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.57□□□□□ -2
TRIM43BA6NCK2 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.57□□□□□ -2
TRIM43BA6NCK2 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TRIM43BA6NCK2 RNU6-626P-201ENST00000363354 107 ntBASIC2.56□□□□□ -2
TRIM43BA6NCK2 RNU6-961P-201ENST00000363893 105 ntBASIC2.56□□□□□ -2
TRIM43BA6NCK2 RNU6-770P-201ENST00000363929 105 ntBASIC2.56□□□□□ -2
TRIM43BA6NCK2 SNORA67.1-201ENST00000364749 141 ntBASIC2.56□□□□□ -2
TRIM43BA6NCK2 RNU6-713P-201ENST00000384761 107 ntBASIC2.56□□□□□ -2
TRIM43BA6NCK2 MIR144-201ENST00000384886 86 ntBASIC2.56□□□□□ -2
TRIM43BA6NCK2 RNA5SP475-201ENST00000410568 110 ntBASIC2.56□□□□□ -2
TRIM43BA6NCK2 SRIP3-201ENST00000413200 219 ntBASIC2.56□□□□□ -2
TRIM43BA6NCK2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.56□□□□□ -2
TRIM43BA6NCK2 MTND3P2-201ENST00000438452 342 ntBASIC2.56□□□□□ -2
TRIM43BA6NCK2 PRELID3BP1-201ENST00000457142 540 ntBASIC2.56□□□□□ -2
TRIM43BA6NCK2 AC107222.1-201ENST00000510899 637 ntBASIC2.56□□□□□ -2
TRIM43BA6NCK2 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.56□□□□□ -2
TRIM43BA6NCK2 IGLV3-17-201ENST00000519099 244 ntBASIC2.56□□□□□ -2
TRIM43BA6NCK2 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.56□□□□□ -2
TRIM43BA6NCK2 MIR4658-201ENST00000584344 65 ntBASIC2.56□□□□□ -2
TRIM43BA6NCK2 AC005176.2-201ENST00000596933 147 ntBASIC2.56□□□□□ -2
TRIM43BA6NCK2 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TRIM43BA6NCK2 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TRIM43BA6NCK2 Y_RNA.19-201ENST00000362462 99 ntBASIC2.55□□□□□ -2
TRIM43BA6NCK2 Y_RNA.214-201ENST00000364201 112 ntBASIC2.55□□□□□ -2
TRIM43BA6NCK2 RNU6-20P-201ENST00000384106 107 ntBASIC2.55□□□□□ -2
TRIM43BA6NCK2 MIR524-201ENST00000385242 87 ntBASIC2.55□□□□□ -2
TRIM43BA6NCK2 RNU5A-5P-201ENST00000411054 116 ntBASIC2.55□□□□□ -2
TRIM43BA6NCK2 AC123900.1-201ENST00000420390 96 ntBASIC2.55□□□□□ -2
TRIM43BA6NCK2 ELOCP20-201ENST00000422460 345 ntBASIC2.55□□□□□ -2
TRIM43BA6NCK2 AC005002.2-201ENST00000438228 269 ntBASIC2.55□□□□□ -2
TRIM43BA6NCK2 RNU7-57P-201ENST00000459540 60 ntBASIC2.55□□□□□ -2
TRIM43BA6NCK2 AK6P2-201ENST00000549020 471 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms