Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 Y_RNA.265-201ENST00000364677 108 ntBASIC0.06□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNU6-1286P-201ENST00000383871 107 ntBASIC0.06□□□□□ -2.4
TCRBV4S1A1TA0A5B7 SNORD105-201ENST00000386910 85 ntBASIC0.06□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MIR1295A-201ENST00000408463 79 ntBASIC0.06□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MTCO2P34-201ENST00000421994 607 ntBASIC0.06□□□□□ -2.4
TCRBV4S1A1TA0A5B7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.06□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AC079781.2-201ENST00000446424 169 ntBASIC0.06□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.06□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AP000870.1-201ENST00000472927 406 ntBASIC0.06□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AC079140.5-201ENST00000507882 310 ntBASIC0.06□□□□□ -2.4
TCRBV4S1A1TA0A5B7 Vault.3-201ENST00000516676 95 ntBASIC0.06□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AC069113.1-201ENST00000517763 267 ntBASIC0.06□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.06□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MIR4703-201ENST00000577728 79 ntBASIC0.06□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RMST_3.1-201ENST00000611651 109 ntBASIC0.06□□□□□ -2.4
TCRBV4S1A1TA0A5B7 SEPT14P19-203ENST00000633205 211 ntBASIC0.06□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AC006927.3-201ENST00000638789 384 ntBASIC0.06□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AC005592.1-201ENST00000566527 1640 ntBASIC0.05□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AL390237.1-201ENST00000404226 1415 ntBASIC0.05□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNU6-137P-201ENST00000363680 108 ntBASIC0.05□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MIR487A-201ENST00000385009 80 ntBASIC0.05□□□□□ -2.4
TCRBV4S1A1TA0A5B7 SNORD73A-201ENST00000386062 65 ntBASIC0.05□□□□□ -2.4
TCRBV4S1A1TA0A5B7 GPR143P-201ENST00000434155 205 ntBASIC0.05□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AC093019.1-201ENST00000443135 252 ntBASIC0.05□□□□□ -2.4
TCRBV4S1A1TA0A5B7 SCARNA18-201ENST00000459004 134 ntBASIC0.05□□□□□ -2.4
TCRBV4S1A1TA0A5B7 snoU109.3-201ENST00000459477 145 ntBASIC0.05□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AF186996.7-201ENST00000492781 209 ntBASIC0.05□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MTND2P32-201ENST00000521584 1038 ntBASIC0.05□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MRPS36P4-201ENST00000534436 298 ntBASIC0.05□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AC100812.1-201ENST00000607622 580 ntBASIC0.05□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AL136317.1-201ENST00000612653 226 ntBASIC0.05□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MIR2909-201ENST00000617113 69 ntBASIC0.05□□□□□ -2.4
TCRBV4S1A1TA0A5B7 Y_RNA.100-201ENST00000363141 102 ntBASIC0.04□□□□□ -2.4
TCRBV4S1A1TA0A5B7 SNORA25.3-201ENST00000363205 127 ntBASIC0.04□□□□□ -2.4
TCRBV4S1A1TA0A5B7 Y_RNA.251-201ENST00000364551 99 ntBASIC0.04□□□□□ -2.4
TCRBV4S1A1TA0A5B7 Y_RNA.399-201ENST00000383955 105 ntBASIC0.04□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNU6-793P-201ENST00000384233 104 ntBASIC0.04□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNU6-1297P-201ENST00000384415 104 ntBASIC0.04□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MIR1-2-201ENST00000384961 85 ntBASIC0.04□□□□□ -2.4
TCRBV4S1A1TA0A5B7 SNORA40.4-201ENST00000390971 128 ntBASIC0.04□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MIR1827-201ENST00000408549 66 ntBASIC0.04□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MIR1185-2-201ENST00000408687 86 ntBASIC0.04□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RPL31P35-201ENST00000431058 377 ntBASIC0.04□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.04□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AC067940.1-201ENST00000458411 300 ntBASIC0.04□□□□□ -2.4
TCRBV4S1A1TA0A5B7 HMGN1P10-201ENST00000474557 553 ntBASIC0.04□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNU6-430P-201ENST00000517078 107 ntBASIC0.04□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AF235103.2-201ENST00000525753 346 ntBASIC0.04□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AC036111.3-201ENST00000526389 112 ntBASIC0.04□□□□□ -2.4
TCRBV4S1A1TA0A5B7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.04□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AK6P2-201ENST00000549020 471 ntBASIC0.04□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AC027288.2-201ENST00000553028 243 ntBASIC0.04□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AC010620.1-201ENST00000601088 1102 ntBASIC0.04□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MIR6079-201ENST00000635807 62 ntBASIC0.04□□□□□ -2.4
TCRBV4S1A1TA0A5B7 ZNF204P-201ENST00000416749 2397 ntBASIC0.03□□□□□ -2.4
TCRBV4S1A1TA0A5B7 Y_RNA.336-201ENST00000365307 109 ntBASIC0.03□□□□□ -2.4
TCRBV4S1A1TA0A5B7 Y_RNA.374-201ENST00000365606 101 ntBASIC0.03□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MIR450B-201ENST00000401182 78 ntBASIC0.03□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.03□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.03□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MTND3P9-201ENST00000429526 346 ntBASIC0.03□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.03□□□□□ -2.4
TCRBV4S1A1TA0A5B7 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.03□□□□□ -2.4
TCRBV4S1A1TA0A5B7 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.03□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.03□□□□□ -2.4
TCRBV4S1A1TA0A5B7 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.03□□□□□ -2.4
TCRBV4S1A1TA0A5B7 HMGN2P26-201ENST00000463169 339 ntBASIC0.03□□□□□ -2.4
TCRBV4S1A1TA0A5B7 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.03□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RN7SKP164-201ENST00000516138 266 ntBASIC0.03□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNU4-77P-201ENST00000516692 156 ntBASIC0.03□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MTND1P5-201ENST00000517906 940 ntBASIC0.03□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MIR4438-201ENST00000585271 93 ntBASIC0.03□□□□□ -2.4
TCRBV4S1A1TA0A5B7 SNORD11B-201ENST00000607707 90 ntBASIC0.03□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AC107308.1-201ENST00000615897 301 ntBASIC0.03□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AC007671.2-201ENST00000637344 619 ntBASIC0.03□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNU6-500P-201ENST00000362349 107 ntBASIC0.02□□□□□ -2.41
TCRBV4S1A1TA0A5B7 Y_RNA.280-201ENST00000364765 112 ntBASIC0.02□□□□□ -2.41
TCRBV4S1A1TA0A5B7 RNU4-45P-201ENST00000365469 141 ntBASIC0.02□□□□□ -2.41
TCRBV4S1A1TA0A5B7 MIR122-201ENST00000385044 85 ntBASIC0.02□□□□□ -2.41
TCRBV4S1A1TA0A5B7 RNA5SP219-201ENST00000390940 113 ntBASIC0.02□□□□□ -2.41
TCRBV4S1A1TA0A5B7 RNU6-994P-201ENST00000410507 111 ntBASIC0.02□□□□□ -2.41
TCRBV4S1A1TA0A5B7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.02□□□□□ -2.41
TCRBV4S1A1TA0A5B7 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.02□□□□□ -2.41
TCRBV4S1A1TA0A5B7 MRPS10P1-201ENST00000448483 130 ntBASIC0.02□□□□□ -2.41
TCRBV4S1A1TA0A5B7 NDUFB4P10-201ENST00000452541 359 ntBASIC0.02□□□□□ -2.41
TCRBV4S1A1TA0A5B7 MTATP6P14-201ENST00000455189 673 ntBASIC0.02□□□□□ -2.41
TCRBV4S1A1TA0A5B7 RNU7-167P-201ENST00000459160 62 ntBASIC0.02□□□□□ -2.41
TCRBV4S1A1TA0A5B7 AC105417.1-201ENST00000514691 285 ntBASIC0.02□□□□□ -2.41
TCRBV4S1A1TA0A5B7 RNU6-58P-201ENST00000517143 103 ntBASIC0.02□□□□□ -2.41
TCRBV4S1A1TA0A5B7 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.02□□□□□ -2.41
TCRBV4S1A1TA0A5B7 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.02□□□□□ -2.41
TCRBV4S1A1TA0A5B7 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
TCRBV4S1A1TA0A5B7 MIR4509-3-201ENST00000578671 94 ntBASIC0.02□□□□□ -2.41
TCRBV4S1A1TA0A5B7 MIR5190-201ENST00000581537 80 ntBASIC0.02□□□□□ -2.41
TCRBV4S1A1TA0A5B7 MIR4509-2-201ENST00000583920 94 ntBASIC0.02□□□□□ -2.41
TCRBV4S1A1TA0A5B7 MIR4768-201ENST00000585270 74 ntBASIC0.02□□□□□ -2.41
TCRBV4S1A1TA0A5B7 AC018645.2-201ENST00000609151 472 ntBASIC0.02□□□□□ -2.41
TCRBV4S1A1TA0A5B7 AC007684.1-201ENST00000609671 477 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms