Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 RNU4-67P-201ENST00000364569 141 ntBASIC0.11□□□□□ -2.39
TRAV3A0A0B4J244 RNU6-245P-201ENST00000384020 107 ntBASIC0.11□□□□□ -2.39
TRAV3A0A0B4J244 RNA5SP63-201ENST00000391225 112 ntBASIC0.11□□□□□ -2.39
TRAV3A0A0B4J244 RNU2-70P-201ENST00000410718 179 ntBASIC0.11□□□□□ -2.39
TRAV3A0A0B4J244 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.11□□□□□ -2.39
TRAV3A0A0B4J244 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.11□□□□□ -2.39
TRAV3A0A0B4J244 AC009961.2-201ENST00000435771 251 ntBASIC0.11□□□□□ -2.39
TRAV3A0A0B4J244 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.11□□□□□ -2.39
TRAV3A0A0B4J244 RNU6-1037P-201ENST00000459571 107 ntBASIC0.11□□□□□ -2.39
TRAV3A0A0B4J244 RNA5SP330-201ENST00000517096 96 ntBASIC0.11□□□□□ -2.39
TRAV3A0A0B4J244 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
TRAV3A0A0B4J244 AL117336.2-201ENST00000602435 335 ntBASIC0.11□□□□□ -2.39
TRAV3A0A0B4J244 SNORD11B-201ENST00000607707 90 ntBASIC0.11□□□□□ -2.39
TRAV3A0A0B4J244 AC006566.1-201ENST00000608943 513 ntBASIC0.11□□□□□ -2.39
TRAV3A0A0B4J244 AC007014.2-201ENST00000615581 479 ntBASIC0.11□□□□□ -2.39
TRAV3A0A0B4J244 7SK.10-201ENST00000621414 298 ntBASIC0.11□□□□□ -2.39
TRAV3A0A0B4J244 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.11□□□□□ -2.39
TRAV3A0A0B4J244 Y_RNA.115-201ENST00000363272 98 ntBASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 RNU6-793P-201ENST00000384233 104 ntBASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 MIR526A1-201ENST00000384897 85 ntBASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 MIR1-2-201ENST00000384961 85 ntBASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 MIR320B2-201ENST00000408479 138 ntBASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 MIR1185-1-201ENST00000408598 86 ntBASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 AL663109.1-201ENST00000411498 844 ntBASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 AC093850.1-201ENST00000454121 251 ntBASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 RPS29P15-201ENST00000458329 171 ntBASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 RNU7-138P-201ENST00000459479 64 ntBASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 AF186996.7-201ENST00000492781 209 ntBASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 AC105313.1-201ENST00000509121 353 ntBASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 MTND1P5-201ENST00000517906 940 ntBASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 AP001372.4-201ENST00000524889 472 ntBASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 AK6P2-201ENST00000549020 471 ntBASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 AC011195.1-201ENST00000578177 177 ntBASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 AC100812.1-201ENST00000607622 580 ntBASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 AC122133.1-201ENST00000613964 233 ntBASIC0.1□□□□□ -2.39
TRAV3A0A0B4J244 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.39
TRAV3A0A0B4J244 Y_RNA.100-201ENST00000363141 102 ntBASIC0.09□□□□□ -2.4
TRAV3A0A0B4J244 SNORD115-8-201ENST00000363856 82 ntBASIC0.09□□□□□ -2.4
TRAV3A0A0B4J244 SNORD115-38-201ENST00000365037 82 ntBASIC0.09□□□□□ -2.4
TRAV3A0A0B4J244 RNU6-606P-201ENST00000384721 111 ntBASIC0.09□□□□□ -2.4
TRAV3A0A0B4J244 MIR562-201ENST00000384894 95 ntBASIC0.09□□□□□ -2.4
TRAV3A0A0B4J244 MIR140-201ENST00000385282 100 ntBASIC0.09□□□□□ -2.4
TRAV3A0A0B4J244 RNU6-1106P-201ENST00000390845 107 ntBASIC0.09□□□□□ -2.4
TRAV3A0A0B4J244 MIR1827-201ENST00000408549 66 ntBASIC0.09□□□□□ -2.4
TRAV3A0A0B4J244 RNU2-29P-201ENST00000410423 189 ntBASIC0.09□□□□□ -2.4
TRAV3A0A0B4J244 AL008987.1-201ENST00000415528 237 ntBASIC0.09□□□□□ -2.4
TRAV3A0A0B4J244 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.09□□□□□ -2.4
TRAV3A0A0B4J244 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV3A0A0B4J244 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV3A0A0B4J244 AC105417.1-201ENST00000514691 285 ntBASIC0.09□□□□□ -2.4
TRAV3A0A0B4J244 RNA5SP454-201ENST00000517231 127 ntBASIC0.09□□□□□ -2.4
TRAV3A0A0B4J244 AC036111.3-201ENST00000526389 112 ntBASIC0.09□□□□□ -2.4
TRAV3A0A0B4J244 AC027288.2-201ENST00000553028 243 ntBASIC0.09□□□□□ -2.4
TRAV3A0A0B4J244 MIR4431-201ENST00000579990 94 ntBASIC0.09□□□□□ -2.4
TRAV3A0A0B4J244 MIR3682-201ENST00000581338 84 ntBASIC0.09□□□□□ -2.4
TRAV3A0A0B4J244 AC234772.3-201ENST00000602277 528 ntBASIC0.09□□□□□ -2.4
TRAV3A0A0B4J244 AL158050.2-201ENST00000605336 568 ntBASIC0.09□□□□□ -2.4
TRAV3A0A0B4J244 AC137590.2-201ENST00000619709 240 ntBASIC0.09□□□□□ -2.4
TRAV3A0A0B4J244 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.09□□□□□ -2.4
TRAV3A0A0B4J244 MIR6079-201ENST00000635807 62 ntBASIC0.09□□□□□ -2.4
TRAV3A0A0B4J244 AC007671.2-201ENST00000637344 619 ntBASIC0.09□□□□□ -2.4
TRAV3A0A0B4J244 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.09□□□□□ -2.4
TRAV3A0A0B4J244 RNU6-833P-201ENST00000363486 107 ntBASIC0.08□□□□□ -2.4
TRAV3A0A0B4J244 Y_RNA.336-201ENST00000365307 109 ntBASIC0.08□□□□□ -2.4
TRAV3A0A0B4J244 SNORD105-201ENST00000386910 85 ntBASIC0.08□□□□□ -2.4
TRAV3A0A0B4J244 SNORD111-201ENST00000408139 94 ntBASIC0.08□□□□□ -2.4
TRAV3A0A0B4J244 MIR1197-201ENST00000408818 88 ntBASIC0.08□□□□□ -2.4
TRAV3A0A0B4J244 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC0.08□□□□□ -2.4
TRAV3A0A0B4J244 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.08□□□□□ -2.4
TRAV3A0A0B4J244 RPL39P5-202ENST00000512505 151 ntBASIC0.08□□□□□ -2.4
TRAV3A0A0B4J244 RNU7-12P-201ENST00000516030 62 ntBASIC0.08□□□□□ -2.4
TRAV3A0A0B4J244 RN7SKP164-201ENST00000516138 266 ntBASIC0.08□□□□□ -2.4
TRAV3A0A0B4J244 RNA5SP54-201ENST00000516951 92 ntBASIC0.08□□□□□ -2.4
TRAV3A0A0B4J244 RNU6-341P-201ENST00000516973 96 ntBASIC0.08□□□□□ -2.4
TRAV3A0A0B4J244 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.08□□□□□ -2.4
TRAV3A0A0B4J244 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.08□□□□□ -2.4
TRAV3A0A0B4J244 AL137161.1-201ENST00000532231 390 ntBASIC0.08□□□□□ -2.4
TRAV3A0A0B4J244 MRPS36P4-201ENST00000534436 298 ntBASIC0.08□□□□□ -2.4
TRAV3A0A0B4J244 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.08□□□□□ -2.4
TRAV3A0A0B4J244 HIF1AP1-201ENST00000553642 175 ntBASIC0.08□□□□□ -2.4
TRAV3A0A0B4J244 AC023827.1-201ENST00000569247 97 ntBASIC0.08□□□□□ -2.4
TRAV3A0A0B4J244 AC091178.2-201ENST00000584401 117 ntBASIC0.08□□□□□ -2.4
TRAV3A0A0B4J244 AL109933.3-201ENST00000619095 188 ntBASIC0.08□□□□□ -2.4
TRAV3A0A0B4J244 MIR103A2-201ENST00000362154 78 ntBASIC0.07□□□□□ -2.4
TRAV3A0A0B4J244 RNU6-137P-201ENST00000363680 108 ntBASIC0.07□□□□□ -2.4
TRAV3A0A0B4J244 Y_RNA.258-201ENST00000364613 105 ntBASIC0.07□□□□□ -2.4
TRAV3A0A0B4J244 SNORA36.2-201ENST00000384004 127 ntBASIC0.07□□□□□ -2.4
TRAV3A0A0B4J244 MIR625-201ENST00000385047 85 ntBASIC0.07□□□□□ -2.4
TRAV3A0A0B4J244 RNA5SP482-201ENST00000391269 118 ntBASIC0.07□□□□□ -2.4
TRAV3A0A0B4J244 MIR1295A-201ENST00000408463 79 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms