Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC074290.1-201ENST00000448883 135 ntBASIC1.24□□□□□ -2.21
TRAPPC4Q9Y296 RN7SKP210-201ENST00000459176 261 ntBASIC1.24□□□□□ -2.21
TRAPPC4Q9Y296 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.24□□□□□ -2.21
TRAPPC4Q9Y296 Y_RNA.682-201ENST00000516457 100 ntBASIC1.24□□□□□ -2.21
TRAPPC4Q9Y296 AL590705.4-201ENST00000532209 134 ntBASIC1.24□□□□□ -2.21
TRAPPC4Q9Y296 MIR4273-201ENST00000582824 84 ntBASIC1.24□□□□□ -2.21
TRAPPC4Q9Y296 SNORD11B-201ENST00000607707 90 ntBASIC1.24□□□□□ -2.21
TRAPPC4Q9Y296 MIR6128-201ENST00000615528 109 ntBASIC1.24□□□□□ -2.21
TRAPPC4Q9Y296 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.24□□□□□ -2.21
TRAPPC4Q9Y296 AL078596.1-201ENST00000624856 447 ntBASIC1.24□□□□□ -2.21
TRAPPC4Q9Y296 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.24□□□□□ -2.21
TRAPPC4Q9Y296 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.24□□□□□ -2.21
TRAPPC4Q9Y296 AL133216.2-202ENST00000634512 349 ntBASIC1.24□□□□□ -2.21
TRAPPC4Q9Y296 AC010615.1-201ENST00000594254 1764 ntBASIC1.24□□□□□ -2.21
TRAPPC4Q9Y296 AL161722.3-201ENST00000605789 2983 ntBASIC1.23□□□□□ -2.21
TRAPPC4Q9Y296 MTND4P12-201ENST00000498999 1377 ntBASIC1.23□□□□□ -2.21
TRAPPC4Q9Y296 RNU6-873P-201ENST00000363833 107 ntBASIC1.23□□□□□ -2.21
TRAPPC4Q9Y296 RNU6-593P-201ENST00000364716 112 ntBASIC1.23□□□□□ -2.21
TRAPPC4Q9Y296 MIR520A-201ENST00000384862 85 ntBASIC1.23□□□□□ -2.21
TRAPPC4Q9Y296 RNU4-62P-201ENST00000410125 130 ntBASIC1.23□□□□□ -2.21
TRAPPC4Q9Y296 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.23□□□□□ -2.21
TRAPPC4Q9Y296 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.23□□□□□ -2.21
TRAPPC4Q9Y296 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.23□□□□□ -2.21
TRAPPC4Q9Y296 NDUFB4P10-201ENST00000452541 359 ntBASIC1.23□□□□□ -2.21
TRAPPC4Q9Y296 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.23□□□□□ -2.21
TRAPPC4Q9Y296 RNU7-57P-201ENST00000459540 60 ntBASIC1.23□□□□□ -2.21
TRAPPC4Q9Y296 AC026782.1-201ENST00000512952 449 ntBASIC1.23□□□□□ -2.21
TRAPPC4Q9Y296 RNA5SP437-201ENST00000517249 129 ntBASIC1.23□□□□□ -2.21
TRAPPC4Q9Y296 AC134698.4-201ENST00000523451 826 ntBASIC1.23□□□□□ -2.21
TRAPPC4Q9Y296 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.23□□□□□ -2.21
TRAPPC4Q9Y296 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.23□□□□□ -2.21
TRAPPC4Q9Y296 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.23□□□□□ -2.21
TRAPPC4Q9Y296 7SK.7-201ENST00000603504 247 ntBASIC1.23□□□□□ -2.21
TRAPPC4Q9Y296 AC018462.2-201ENST00000605375 395 ntBASIC1.23□□□□□ -2.21
TRAPPC4Q9Y296 AC084782.3-201ENST00000612282 578 ntBASIC1.23□□□□□ -2.21
TRAPPC4Q9Y296 AC126177.8-201ENST00000618339 1015 ntBASIC1.23□□□□□ -2.21
TRAPPC4Q9Y296 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 snoU2-30.2-201ENST00000362805 70 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 RNA5SP99-201ENST00000364020 114 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 Y_RNA.339-201ENST00000365325 102 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 Y_RNA.405-201ENST00000383979 100 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 Y_RNA.451-201ENST00000384200 100 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 Y_RNA.524-201ENST00000384564 100 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 Y_RNA.561-201ENST00000384694 100 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 AC016909.1-201ENST00000415916 166 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 SDAD1P3-201ENST00000427380 333 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 AC108667.1-201ENST00000428618 249 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 HMGN2P34-201ENST00000437647 269 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 RNU6-221P-201ENST00000459541 99 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 AC005908.1-201ENST00000468701 347 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 AC025465.3-201ENST00000510570 311 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 RNU7-175P-201ENST00000515915 61 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 SNORA25.14-201ENST00000516481 132 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 RNU6-1016P-201ENST00000516689 94 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 MTND4LP26-201ENST00000518144 282 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 AC084364.2-201ENST00000546924 395 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 AK6P2-201ENST00000549020 471 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 UBL5P4-201ENST00000562584 236 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 MIR5701-3-201ENST00000578890 82 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 MIR5701-1-201ENST00000585138 82 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 AC092794.1-201ENST00000612734 582 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 MIR5701-2-201ENST00000615634 82 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 snoZ196.1-201ENST00000625269 89 ntBASIC1.22□□□□□ -2.21
TRAPPC4Q9Y296 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 RNU6-280P-201ENST00000364145 104 ntBASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 RNU6-203P-201ENST00000384038 104 ntBASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 MIR10B-201ENST00000385011 110 ntBASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 MIR548F5-201ENST00000408421 86 ntBASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 Y_RNA.599-201ENST00000410489 109 ntBASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 RNU6-57P-201ENST00000411348 103 ntBASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 MTCO3P29-201ENST00000432119 779 ntBASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 AC069257.2-201ENST00000441819 155 ntBASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 AC091179.3-201ENST00000474761 144 ntBASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 RPL26P26-201ENST00000480251 434 ntBASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 AC018710.1-201ENST00000506509 158 ntBASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 RNU1-92P-201ENST00000517017 135 ntBASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 RNU1-117P-201ENST00000517041 158 ntBASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 AC025647.1-201ENST00000517879 253 ntBASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 DNAJC19P9-201ENST00000555084 351 ntBASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 MIR4421-201ENST00000578133 69 ntBASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 AP000942.3-201ENST00000603702 160 ntBASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 MIR8074-201ENST00000615081 81 ntBASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 U6atac.1-201ENST00000616025 117 ntBASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 AC245060.5-201ENST00000610778 3293 ntBASIC1.21□□□□□ -2.22
TRAPPC4Q9Y296 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 U3.8-201ENST00000363675 217 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 RNU5F-3P-201ENST00000363767 117 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 Y_RNA.287-201ENST00000364853 94 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 SNORA72.2-201ENST00000365028 127 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms