Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SHROOM4Q9ULL8 RPS3AP52-201ENST00000435639 297 ntBASIC3.02□□□□□ -1.93
SHROOM4Q9ULL8 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.02□□□□□ -1.93
SHROOM4Q9ULL8 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.02□□□□□ -1.93
SHROOM4Q9ULL8 AC083806.3-201ENST00000614016 455 ntBASIC3.02□□□□□ -1.93
SHROOM4Q9ULL8 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.02□□□□□ -1.93
SHROOM4Q9ULL8 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
SHROOM4Q9ULL8 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
SHROOM4Q9ULL8 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
SHROOM4Q9ULL8 MIR340-201ENST00000362125 95 ntBASIC3.01□□□□□ -1.93
SHROOM4Q9ULL8 RNY1-201ENST00000364228 113 ntBASIC3.01□□□□□ -1.93
SHROOM4Q9ULL8 MIR586-201ENST00000385035 97 ntBASIC3.01□□□□□ -1.93
SHROOM4Q9ULL8 RNU6-1050P-201ENST00000410388 107 ntBASIC3.01□□□□□ -1.93
SHROOM4Q9ULL8 HMGN2P19-201ENST00000425149 265 ntBASIC3.01□□□□□ -1.93
SHROOM4Q9ULL8 AC010531.2-201ENST00000465012 153 ntBASIC3.01□□□□□ -1.93
SHROOM4Q9ULL8 AL096840.1-201ENST00000603287 93 ntBASIC3.01□□□□□ -1.93
SHROOM4Q9ULL8 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.01□□□□□ -1.93
SHROOM4Q9ULL8 PISRT1.1-201ENST00000616930 107 ntBASIC3.01□□□□□ -1.93
SHROOM4Q9ULL8 RNU1-93P-201ENST00000364704 169 ntBASIC3□□□□□ -1.93
SHROOM4Q9ULL8 RNU6-842P-201ENST00000384269 107 ntBASIC3□□□□□ -1.93
SHROOM4Q9ULL8 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3□□□□□ -1.93
SHROOM4Q9ULL8 ATP5J2P3-201ENST00000451550 258 ntBASIC3□□□□□ -1.93
SHROOM4Q9ULL8 AC097473.1-201ENST00000508142 408 ntBASIC3□□□□□ -1.93
SHROOM4Q9ULL8 MIR514B-201ENST00000516774 80 ntBASIC3□□□□□ -1.93
SHROOM4Q9ULL8 RNA5SP364-201ENST00000516938 78 ntBASIC3□□□□□ -1.93
SHROOM4Q9ULL8 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3□□□□□ -1.93
SHROOM4Q9ULL8 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3□□□□□ -1.93
SHROOM4Q9ULL8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SHROOM4Q9ULL8 RNU1-62P-201ENST00000362599 164 ntBASIC2.99□□□□□ -1.93
SHROOM4Q9ULL8 Y_RNA.339-201ENST00000365325 102 ntBASIC2.99□□□□□ -1.93
SHROOM4Q9ULL8 RNU6-975P-201ENST00000384296 105 ntBASIC2.99□□□□□ -1.93
SHROOM4Q9ULL8 MIR548F5-201ENST00000408421 86 ntBASIC2.99□□□□□ -1.93
SHROOM4Q9ULL8 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.99□□□□□ -1.93
SHROOM4Q9ULL8 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.99□□□□□ -1.93
SHROOM4Q9ULL8 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.99□□□□□ -1.93
SHROOM4Q9ULL8 RPL30P10-201ENST00000488148 337 ntBASIC2.99□□□□□ -1.93
SHROOM4Q9ULL8 AC026782.1-201ENST00000512952 449 ntBASIC2.99□□□□□ -1.93
SHROOM4Q9ULL8 RNA5SP220-201ENST00000516298 104 ntBASIC2.99□□□□□ -1.93
SHROOM4Q9ULL8 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.99□□□□□ -1.93
SHROOM4Q9ULL8 MIR3618-201ENST00000580330 88 ntBASIC2.99□□□□□ -1.93
SHROOM4Q9ULL8 AC005899.2-201ENST00000584353 90 ntBASIC2.99□□□□□ -1.93
SHROOM4Q9ULL8 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.99□□□□□ -1.93
SHROOM4Q9ULL8 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SHROOM4Q9ULL8 SNORD114-22-201ENST00000365423 72 ntBASIC2.98□□□□□ -1.93
SHROOM4Q9ULL8 Y_RNA.405-201ENST00000383979 100 ntBASIC2.98□□□□□ -1.93
SHROOM4Q9ULL8 RNU6-42P-201ENST00000384165 107 ntBASIC2.98□□□□□ -1.93
SHROOM4Q9ULL8 Y_RNA.451-201ENST00000384200 100 ntBASIC2.98□□□□□ -1.93
SHROOM4Q9ULL8 Y_RNA.524-201ENST00000384564 100 ntBASIC2.98□□□□□ -1.93
SHROOM4Q9ULL8 Y_RNA.561-201ENST00000384694 100 ntBASIC2.98□□□□□ -1.93
SHROOM4Q9ULL8 MIR487A-201ENST00000385009 80 ntBASIC2.98□□□□□ -1.93
SHROOM4Q9ULL8 RNU7-57P-201ENST00000459540 60 ntBASIC2.98□□□□□ -1.93
SHROOM4Q9ULL8 RNU6-1016P-201ENST00000516689 94 ntBASIC2.98□□□□□ -1.93
SHROOM4Q9ULL8 Y_RNA.708-201ENST00000516950 96 ntBASIC2.98□□□□□ -1.93
SHROOM4Q9ULL8 AL121579.1-201ENST00000555129 305 ntBASIC2.98□□□□□ -1.93
SHROOM4Q9ULL8 AC136443.5-201ENST00000603741 370 ntBASIC2.98□□□□□ -1.93
SHROOM4Q9ULL8 AC091932.3-201ENST00000624223 323 ntBASIC2.98□□□□□ -1.93
SHROOM4Q9ULL8 AL359851.1-201ENST00000569460 4997 ntBASIC2.98□□□□□ -1.93
SHROOM4Q9ULL8 MIR517C-201ENST00000385103 95 ntBASIC2.97□□□□□ -1.93
SHROOM4Q9ULL8 RPL21P111-201ENST00000418453 477 ntBASIC2.97□□□□□ -1.93
SHROOM4Q9ULL8 PRDX4P1-201ENST00000507189 574 ntBASIC2.97□□□□□ -1.93
SHROOM4Q9ULL8 RNVU1-2-201ENST00000516326 135 ntBASIC2.97□□□□□ -1.93
SHROOM4Q9ULL8 SNORA31.24-201ENST00000517232 57 ntBASIC2.97□□□□□ -1.93
SHROOM4Q9ULL8 AC134698.4-201ENST00000523451 826 ntBASIC2.97□□□□□ -1.93
SHROOM4Q9ULL8 MIR4713-201ENST00000582691 75 ntBASIC2.97□□□□□ -1.93
SHROOM4Q9ULL8 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SHROOM4Q9ULL8 RNU6-1059P-201ENST00000363752 98 ntBASIC2.96□□□□□ -1.93
SHROOM4Q9ULL8 Y_RNA.279-201ENST00000364763 95 ntBASIC2.96□□□□□ -1.93
SHROOM4Q9ULL8 RNU6-601P-201ENST00000384540 107 ntBASIC2.96□□□□□ -1.93
SHROOM4Q9ULL8 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
SHROOM4Q9ULL8 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.96□□□□□ -1.93
SHROOM4Q9ULL8 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.96□□□□□ -1.93
SHROOM4Q9ULL8 RNU6-1146P-201ENST00000516282 102 ntBASIC2.96□□□□□ -1.93
SHROOM4Q9ULL8 Y_RNA.706-201ENST00000516933 99 ntBASIC2.96□□□□□ -1.93
SHROOM4Q9ULL8 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.96□□□□□ -1.93
SHROOM4Q9ULL8 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.96□□□□□ -1.93
SHROOM4Q9ULL8 AL078596.1-201ENST00000624856 447 ntBASIC2.96□□□□□ -1.93
SHROOM4Q9ULL8 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SHROOM4Q9ULL8 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SHROOM4Q9ULL8 Y_RNA.48-201ENST00000362710 103 ntBASIC2.96□□□□□ -1.94
SHROOM4Q9ULL8 RNU6-1235P-201ENST00000384559 107 ntBASIC2.96□□□□□ -1.94
SHROOM4Q9ULL8 RNU6-700P-201ENST00000391043 107 ntBASIC2.96□□□□□ -1.94
SHROOM4Q9ULL8 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.96□□□□□ -1.94
SHROOM4Q9ULL8 RNU6-498P-201ENST00000459468 107 ntBASIC2.96□□□□□ -1.94
SHROOM4Q9ULL8 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.96□□□□□ -1.94
SHROOM4Q9ULL8 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.96□□□□□ -1.94
SHROOM4Q9ULL8 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.96□□□□□ -1.94
SHROOM4Q9ULL8 AC010900.2-201ENST00000604508 210 ntBASIC2.96□□□□□ -1.94
SHROOM4Q9ULL8 AC100812.1-201ENST00000607622 580 ntBASIC2.96□□□□□ -1.94
SHROOM4Q9ULL8 SNORD11B-201ENST00000607707 90 ntBASIC2.96□□□□□ -1.94
SHROOM4Q9ULL8 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
SHROOM4Q9ULL8 MIR676-201ENST00000390702 67 ntBASIC2.95□□□□□ -1.94
SHROOM4Q9ULL8 RNU6-159P-201ENST00000391080 106 ntBASIC2.95□□□□□ -1.94
SHROOM4Q9ULL8 Y_RNA.594-201ENST00000410373 140 ntBASIC2.95□□□□□ -1.94
SHROOM4Q9ULL8 AC004866.1-201ENST00000411748 78 ntBASIC2.95□□□□□ -1.94
SHROOM4Q9ULL8 RNU6-307P-201ENST00000516743 106 ntBASIC2.95□□□□□ -1.94
SHROOM4Q9ULL8 AC027288.2-201ENST00000553028 243 ntBASIC2.95□□□□□ -1.94
SHROOM4Q9ULL8 SUB1P4-201ENST00000566062 339 ntBASIC2.95□□□□□ -1.94
SHROOM4Q9ULL8 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.94□□□□□ -1.94
SHROOM4Q9ULL8 RNU6-856P-201ENST00000516959 98 ntBASIC2.94□□□□□ -1.94
SHROOM4Q9ULL8 MIR5094-201ENST00000578766 85 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms