Protein–RNA interactions for Protein: Q9UKK3

PARP4, Poly [ADP-ribose] polymerase 4, humanhuman

Known RBP Predictions only

Length 1,724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARP4Q9UKK3 OFD1P3Y-201ENST00000453312 783 ntBASIC-1.12□□□□□ -2.59
PARP4Q9UKK3 RPL39P36-201ENST00000490784 156 ntBASIC-1.12□□□□□ -2.59
PARP4Q9UKK3 MTCO3P15-201ENST00000526563 574 ntBASIC-1.12□□□□□ -2.59
PARP4Q9UKK3 UBE2Q2P8-201ENST00000560644 102 ntBASIC-1.12□□□□□ -2.59
PARP4Q9UKK3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-1.12□□□□□ -2.59
PARP4Q9UKK3 MIR6514-201ENST00000622549 70 ntBASIC-1.12□□□□□ -2.59
PARP4Q9UKK3 RNU1-76P-201ENST00000362903 159 ntBASIC-1.12□□□□□ -2.59
PARP4Q9UKK3 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.12□□□□□ -2.59
PARP4Q9UKK3 RNU2-3P-201ENST00000410144 191 ntBASIC-1.12□□□□□ -2.59
PARP4Q9UKK3 CDK8P2-201ENST00000415020 547 ntBASIC-1.12□□□□□ -2.59
PARP4Q9UKK3 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-1.12□□□□□ -2.59
PARP4Q9UKK3 AC092170.1-201ENST00000440211 356 ntBASIC-1.12□□□□□ -2.59
PARP4Q9UKK3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-1.12□□□□□ -2.59
PARP4Q9UKK3 snoU13.8-201ENST00000458890 104 ntBASIC-1.12□□□□□ -2.59
PARP4Q9UKK3 RNU7-94P-201ENST00000459576 63 ntBASIC-1.12□□□□□ -2.59
PARP4Q9UKK3 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-1.12□□□□□ -2.59
PARP4Q9UKK3 AC021146.9-201ENST00000512503 156 ntBASIC-1.12□□□□□ -2.59
PARP4Q9UKK3 AC006927.4-201ENST00000639187 543 ntBASIC-1.12□□□□□ -2.59
PARP4Q9UKK3 RNU6-545P-201ENST00000362681 104 ntBASIC-1.13□□□□□ -2.59
PARP4Q9UKK3 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.13□□□□□ -2.59
PARP4Q9UKK3 RNU6-359P-201ENST00000365466 108 ntBASIC-1.13□□□□□ -2.59
PARP4Q9UKK3 RNU6-613P-201ENST00000410412 108 ntBASIC-1.13□□□□□ -2.59
PARP4Q9UKK3 POLR2KP2-201ENST00000438155 177 ntBASIC-1.13□□□□□ -2.59
PARP4Q9UKK3 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC-1.13□□□□□ -2.59
PARP4Q9UKK3 AC114982.2-201ENST00000461396 358 ntBASIC-1.13□□□□□ -2.59
PARP4Q9UKK3 AC022447.4-201ENST00000504053 364 ntBASIC-1.13□□□□□ -2.59
PARP4Q9UKK3 MTND4P9-201ENST00000507819 1346 ntBASIC-1.13□□□□□ -2.59
PARP4Q9UKK3 RNU6-948P-201ENST00000516374 107 ntBASIC-1.13□□□□□ -2.59
PARP4Q9UKK3 RNU6-1069P-201ENST00000516612 133 ntBASIC-1.13□□□□□ -2.59
PARP4Q9UKK3 AP001372.4-201ENST00000524889 472 ntBASIC-1.13□□□□□ -2.59
PARP4Q9UKK3 AC104383.1-201ENST00000530297 370 ntBASIC-1.13□□□□□ -2.59
PARP4Q9UKK3 SCARNA4-201ENST00000629045 128 ntBASIC-1.13□□□□□ -2.59
PARP4Q9UKK3 USP9YP21-201ENST00000420603 432 ntBASIC-1.14□□□□□ -2.59
PARP4Q9UKK3 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-1.14□□□□□ -2.59
PARP4Q9UKK3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-1.14□□□□□ -2.59
PARP4Q9UKK3 AC133485.4-201ENST00000561835 220 ntBASIC-1.14□□□□□ -2.59
PARP4Q9UKK3 MTCYBP33-201ENST00000575007 1130 ntBASIC-1.14□□□□□ -2.59
PARP4Q9UKK3 RPL17P51-201ENST00000605218 238 ntBASIC-1.14□□□□□ -2.59
PARP4Q9UKK3 AL354696.1-201ENST00000614652 497 ntBASIC-1.14□□□□□ -2.59
PARP4Q9UKK3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-1.14□□□□□ -2.59
PARP4Q9UKK3 RNY4P27-201ENST00000363341 96 ntBASIC-1.15□□□□□ -2.59
PARP4Q9UKK3 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.15□□□□□ -2.59
PARP4Q9UKK3 RNU6-364P-201ENST00000384387 107 ntBASIC-1.15□□□□□ -2.59
PARP4Q9UKK3 MIR16-1-201ENST00000385271 89 ntBASIC-1.15□□□□□ -2.59
PARP4Q9UKK3 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-1.15□□□□□ -2.59
PARP4Q9UKK3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-1.15□□□□□ -2.59
PARP4Q9UKK3 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-1.15□□□□□ -2.59
PARP4Q9UKK3 RNU7-41P-201ENST00000515917 61 ntBASIC-1.15□□□□□ -2.59
PARP4Q9UKK3 RN7SKP19-201ENST00000516016 252 ntBASIC-1.15□□□□□ -2.59
PARP4Q9UKK3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-1.15□□□□□ -2.59
PARP4Q9UKK3 MIR3152-201ENST00000579801 74 ntBASIC-1.15□□□□□ -2.59
PARP4Q9UKK3 AC121334.2-201ENST00000605387 271 ntBASIC-1.15□□□□□ -2.59
PARP4Q9UKK3 SNORA28-201ENST00000606769 126 ntBASIC-1.15□□□□□ -2.59
PARP4Q9UKK3 MIR7107-201ENST00000611489 80 ntBASIC-1.15□□□□□ -2.59
PARP4Q9UKK3 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-1.15□□□□□ -2.59
PARP4Q9UKK3 RNU4-16P-201ENST00000364737 141 ntBASIC-1.15□□□□□ -2.59
PARP4Q9UKK3 RNU6-114P-201ENST00000384704 105 ntBASIC-1.15□□□□□ -2.59
PARP4Q9UKK3 MIR544A-201ENST00000384855 91 ntBASIC-1.15□□□□□ -2.59
PARP4Q9UKK3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-1.15□□□□□ -2.59
PARP4Q9UKK3 RNA5SP201-201ENST00000410316 124 ntBASIC-1.15□□□□□ -2.59
PARP4Q9UKK3 EXOSC3P1-201ENST00000448649 500 ntBASIC-1.15□□□□□ -2.59
PARP4Q9UKK3 RNU6-448P-201ENST00000517052 107 ntBASIC-1.15□□□□□ -2.59
PARP4Q9UKK3 MIR3115-201ENST00000577915 68 ntBASIC-1.15□□□□□ -2.59
PARP4Q9UKK3 VN1R87P-201ENST00000596706 487 ntBASIC-1.15□□□□□ -2.59
PARP4Q9UKK3 AL117336.2-201ENST00000602435 335 ntBASIC-1.15□□□□□ -2.59
PARP4Q9UKK3 MIR6507-201ENST00000613630 70 ntBASIC-1.15□□□□□ -2.59
PARP4Q9UKK3 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.16□□□□□ -2.6
PARP4Q9UKK3 MIR301A-201ENST00000385261 86 ntBASIC-1.16□□□□□ -2.6
PARP4Q9UKK3 MTCYBP2-201ENST00000407745 171 ntBASIC-1.16□□□□□ -2.6
PARP4Q9UKK3 RNA5SP95-201ENST00000410319 137 ntBASIC-1.16□□□□□ -2.6
PARP4Q9UKK3 AL355994.1-201ENST00000424379 260 ntBASIC-1.16□□□□□ -2.6
PARP4Q9UKK3 RNU2-34P-201ENST00000516534 121 ntBASIC-1.16□□□□□ -2.6
PARP4Q9UKK3 AC012507.3-201ENST00000603556 477 ntBASIC-1.16□□□□□ -2.6
PARP4Q9UKK3 AC245008.1-201ENST00000608123 476 ntBASIC-1.16□□□□□ -2.6
PARP4Q9UKK3 MIR6828-201ENST00000636181 60 ntBASIC-1.16□□□□□ -2.6
PARP4Q9UKK3 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-1.17□□□□□ -2.6
PARP4Q9UKK3 MIR526A1-201ENST00000384897 85 ntBASIC-1.17□□□□□ -2.6
PARP4Q9UKK3 MIR501-201ENST00000390204 84 ntBASIC-1.17□□□□□ -2.6
PARP4Q9UKK3 MIR891A-201ENST00000401237 79 ntBASIC-1.17□□□□□ -2.6
PARP4Q9UKK3 FCF1P9-201ENST00000412546 282 ntBASIC-1.17□□□□□ -2.6
PARP4Q9UKK3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-1.17□□□□□ -2.6
PARP4Q9UKK3 AL512326.2-201ENST00000426359 151 ntBASIC-1.17□□□□□ -2.6
PARP4Q9UKK3 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-1.17□□□□□ -2.6
PARP4Q9UKK3 AC010468.3-201ENST00000508225 458 ntBASIC-1.17□□□□□ -2.6
PARP4Q9UKK3 AC105029.1-201ENST00000520250 669 ntBASIC-1.17□□□□□ -2.6
PARP4Q9UKK3 AC115990.1-201ENST00000526957 301 ntBASIC-1.17□□□□□ -2.6
PARP4Q9UKK3 AC121247.2-201ENST00000604776 136 ntBASIC-1.17□□□□□ -2.6
PARP4Q9UKK3 AL139286.2-201ENST00000606838 396 ntBASIC-1.17□□□□□ -2.6
PARP4Q9UKK3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.17□□□□□ -2.6
PARP4Q9UKK3 AL136221.1-201ENST00000621449 509 ntBASIC-1.17□□□□□ -2.6
PARP4Q9UKK3 AP000568.1-201ENST00000282964 442 ntBASIC-1.18□□□□□ -2.6
PARP4Q9UKK3 AC244250.2-201ENST00000418731 148 ntBASIC-1.18□□□□□ -2.6
PARP4Q9UKK3 AL139421.1-201ENST00000423010 169 ntBASIC-1.18□□□□□ -2.6
PARP4Q9UKK3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.18□□□□□ -2.6
PARP4Q9UKK3 RPS29P27-201ENST00000463711 170 ntBASIC-1.18□□□□□ -2.6
PARP4Q9UKK3 ZNF321P-202ENST00000550843 495 ntBASIC-1.18□□□□□ -2.6
PARP4Q9UKK3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-1.18□□□□□ -2.6
PARP4Q9UKK3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-1.18□□□□□ -2.6
PARP4Q9UKK3 MIR1273C-201ENST00000578669 77 ntBASIC-1.18□□□□□ -2.6
PARP4Q9UKK3 AC008608.1-201ENST00000603910 127 ntBASIC-1.18□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms