Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
NPC1L1Q9UHC9 AL589823.1-201ENST00000429577 183 ntBASIC1.59□□□□□ -2.16
NPC1L1Q9UHC9 FTH1P12-201ENST00000432137 551 ntBASIC1.59□□□□□ -2.16
NPC1L1Q9UHC9 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.59□□□□□ -2.16
NPC1L1Q9UHC9 AC079354.2-201ENST00000453523 154 ntBASIC1.59□□□□□ -2.16
NPC1L1Q9UHC9 MTCO3P8-201ENST00000453691 755 ntBASIC1.59□□□□□ -2.16
NPC1L1Q9UHC9 RNU6-498P-201ENST00000459468 107 ntBASIC1.59□□□□□ -2.16
NPC1L1Q9UHC9 RPS29P1-201ENST00000465274 159 ntBASIC1.59□□□□□ -2.16
NPC1L1Q9UHC9 HMGN1P13-201ENST00000505795 138 ntBASIC1.59□□□□□ -2.16
NPC1L1Q9UHC9 RNU6-864P-201ENST00000516256 108 ntBASIC1.59□□□□□ -2.16
NPC1L1Q9UHC9 RNU6-1146P-201ENST00000516282 102 ntBASIC1.59□□□□□ -2.16
NPC1L1Q9UHC9 RNU6-344P-201ENST00000516635 111 ntBASIC1.59□□□□□ -2.16
NPC1L1Q9UHC9 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.59□□□□□ -2.16
NPC1L1Q9UHC9 AC090517.2-201ENST00000614966 680 ntBASIC1.59□□□□□ -2.16
NPC1L1Q9UHC9 MIR6515-201ENST00000619843 57 ntBASIC1.59□□□□□ -2.16
NPC1L1Q9UHC9 PVT1_3.1-201ENST00000620853 95 ntBASIC1.59□□□□□ -2.16
NPC1L1Q9UHC9 AC090617.10-201ENST00000624308 134 ntBASIC1.59□□□□□ -2.16
NPC1L1Q9UHC9 MIR3662-201ENST00000637030 95 ntBASIC1.59□□□□□ -2.16
NPC1L1Q9UHC9 MIR6767-201ENST00000637302 66 ntBASIC1.59□□□□□ -2.16
NPC1L1Q9UHC9 RNU6-975P-201ENST00000384296 105 ntBASIC1.58□□□□□ -2.16
NPC1L1Q9UHC9 MIR520A-201ENST00000384862 85 ntBASIC1.58□□□□□ -2.16
NPC1L1Q9UHC9 RPL21P111-201ENST00000418453 477 ntBASIC1.58□□□□□ -2.16
NPC1L1Q9UHC9 AL139396.1-201ENST00000421137 167 ntBASIC1.58□□□□□ -2.16
NPC1L1Q9UHC9 AL590632.1-201ENST00000424289 371 ntBASIC1.58□□□□□ -2.16
NPC1L1Q9UHC9 AL353149.1-201ENST00000610667 244 ntBASIC1.58□□□□□ -2.16
NPC1L1Q9UHC9 MIR8074-201ENST00000615081 81 ntBASIC1.58□□□□□ -2.16
NPC1L1Q9UHC9 AC022513.1-201ENST00000624512 117 ntBASIC1.58□□□□□ -2.16
NPC1L1Q9UHC9 MIR3688-2-201ENST00000636963 87 ntBASIC1.58□□□□□ -2.16
NPC1L1Q9UHC9 AC100810.6-201ENST00000638068 285 ntBASIC1.58□□□□□ -2.16
NPC1L1Q9UHC9 ZNF204P-201ENST00000416749 2397 ntBASIC1.57□□□□□ -2.16
NPC1L1Q9UHC9 SNORD114-26-201ENST00000363543 72 ntBASIC1.57□□□□□ -2.16
NPC1L1Q9UHC9 RNU6-112P-201ENST00000363599 104 ntBASIC1.57□□□□□ -2.16
NPC1L1Q9UHC9 RNU6-1019P-201ENST00000364424 107 ntBASIC1.57□□□□□ -2.16
NPC1L1Q9UHC9 RNU6-418P-201ENST00000384035 107 ntBASIC1.57□□□□□ -2.16
NPC1L1Q9UHC9 RNU2-7P-201ENST00000410794 178 ntBASIC1.57□□□□□ -2.16
NPC1L1Q9UHC9 snoU13.30-201ENST00000458951 104 ntBASIC1.57□□□□□ -2.16
NPC1L1Q9UHC9 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.57□□□□□ -2.16
NPC1L1Q9UHC9 AC025465.3-201ENST00000510570 311 ntBASIC1.57□□□□□ -2.16
NPC1L1Q9UHC9 RNU1-54P-201ENST00000517181 120 ntBASIC1.57□□□□□ -2.16
NPC1L1Q9UHC9 FAM106DP-201ENST00000586416 501 ntBASIC1.57□□□□□ -2.16
NPC1L1Q9UHC9 RNU6-414P-201ENST00000363705 104 ntBASIC1.56□□□□□ -2.16
NPC1L1Q9UHC9 RNU1-96P-201ENST00000364163 162 ntBASIC1.56□□□□□ -2.16
NPC1L1Q9UHC9 RNU6-1305P-201ENST00000364353 104 ntBASIC1.56□□□□□ -2.16
NPC1L1Q9UHC9 SNORA72.2-201ENST00000365028 127 ntBASIC1.56□□□□□ -2.16
NPC1L1Q9UHC9 RNU6-596P-201ENST00000365395 98 ntBASIC1.56□□□□□ -2.16
NPC1L1Q9UHC9 RNU6-541P-201ENST00000384709 110 ntBASIC1.56□□□□□ -2.16
NPC1L1Q9UHC9 MIR515-2-201ENST00000384883 83 ntBASIC1.56□□□□□ -2.16
NPC1L1Q9UHC9 MIR515-1-201ENST00000384884 83 ntBASIC1.56□□□□□ -2.16
NPC1L1Q9UHC9 MIR32-201ENST00000384965 70 ntBASIC1.56□□□□□ -2.16
NPC1L1Q9UHC9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
NPC1L1Q9UHC9 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
NPC1L1Q9UHC9 AL591704.2-201ENST00000421658 181 ntBASIC1.56□□□□□ -2.16
NPC1L1Q9UHC9 CST2P1-201ENST00000425770 87 ntBASIC1.56□□□□□ -2.16
NPC1L1Q9UHC9 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.56□□□□□ -2.16
NPC1L1Q9UHC9 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.56□□□□□ -2.16
NPC1L1Q9UHC9 AC010409.1-201ENST00000487382 476 ntBASIC1.56□□□□□ -2.16
NPC1L1Q9UHC9 AC011406.1-201ENST00000512440 370 ntBASIC1.56□□□□□ -2.16
NPC1L1Q9UHC9 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.56□□□□□ -2.16
NPC1L1Q9UHC9 RNA5SP481-201ENST00000516814 122 ntBASIC1.56□□□□□ -2.16
NPC1L1Q9UHC9 SNORA31.17-201ENST00000516953 127 ntBASIC1.56□□□□□ -2.16
NPC1L1Q9UHC9 MIR4273-201ENST00000582824 84 ntBASIC1.56□□□□□ -2.16
NPC1L1Q9UHC9 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.56□□□□□ -2.16
NPC1L1Q9UHC9 MIR6779-201ENST00000617283 64 ntBASIC1.56□□□□□ -2.16
NPC1L1Q9UHC9 AL078596.1-201ENST00000624856 447 ntBASIC1.56□□□□□ -2.16
NPC1L1Q9UHC9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
NPC1L1Q9UHC9 AC010615.1-201ENST00000594254 1764 ntBASIC1.55□□□□□ -2.16
NPC1L1Q9UHC9 MIR424-201ENST00000362227 98 ntBASIC1.55□□□□□ -2.16
NPC1L1Q9UHC9 RNU6-862P-201ENST00000362804 105 ntBASIC1.55□□□□□ -2.16
NPC1L1Q9UHC9 RNU6-280P-201ENST00000364145 104 ntBASIC1.55□□□□□ -2.16
NPC1L1Q9UHC9 SNORD115-47-201ENST00000391226 86 ntBASIC1.55□□□□□ -2.16
NPC1L1Q9UHC9 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.55□□□□□ -2.16
NPC1L1Q9UHC9 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.55□□□□□ -2.16
NPC1L1Q9UHC9 MTCO3P29-201ENST00000432119 779 ntBASIC1.55□□□□□ -2.16
NPC1L1Q9UHC9 UBE2V1P8-201ENST00000437166 265 ntBASIC1.55□□□□□ -2.16
NPC1L1Q9UHC9 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.55□□□□□ -2.16
NPC1L1Q9UHC9 HMGN2P9-201ENST00000476875 229 ntBASIC1.55□□□□□ -2.16
NPC1L1Q9UHC9 RNU6-1041P-201ENST00000516254 102 ntBASIC1.55□□□□□ -2.16
NPC1L1Q9UHC9 SNORD11B-201ENST00000607707 90 ntBASIC1.55□□□□□ -2.16
NPC1L1Q9UHC9 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.55□□□□□ -2.16
NPC1L1Q9UHC9 Y_RNA.319-201ENST00000365138 92 ntBASIC1.54□□□□□ -2.16
NPC1L1Q9UHC9 RNU6-1080P-201ENST00000383982 107 ntBASIC1.54□□□□□ -2.16
NPC1L1Q9UHC9 Y_RNA.490-201ENST00000384413 102 ntBASIC1.54□□□□□ -2.16
NPC1L1Q9UHC9 RNU6-360P-201ENST00000390944 104 ntBASIC1.54□□□□□ -2.16
NPC1L1Q9UHC9 RNU6-510P-201ENST00000391239 108 ntBASIC1.54□□□□□ -2.16
NPC1L1Q9UHC9 MIR1277-201ENST00000408536 78 ntBASIC1.54□□□□□ -2.16
NPC1L1Q9UHC9 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.54□□□□□ -2.16
NPC1L1Q9UHC9 MTATP6P13-201ENST00000438531 667 ntBASIC1.54□□□□□ -2.16
NPC1L1Q9UHC9 MIR3942-201ENST00000585264 109 ntBASIC1.54□□□□□ -2.16
NPC1L1Q9UHC9 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.54□□□□□ -2.16
NPC1L1Q9UHC9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.54□□□□□ -2.16
NPC1L1Q9UHC9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.54□□□□□ -2.16
NPC1L1Q9UHC9 AC008873.1-201ENST00000625051 138 ntBASIC1.54□□□□□ -2.16
NPC1L1Q9UHC9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
NPC1L1Q9UHC9 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.54□□□□□ -2.16
NPC1L1Q9UHC9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.53□□□□□ -2.16
NPC1L1Q9UHC9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
NPC1L1Q9UHC9 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
NPC1L1Q9UHC9 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.53□□□□□ -2.16
NPC1L1Q9UHC9 AC008134.1-201ENST00000420943 193 ntBASIC1.53□□□□□ -2.16
NPC1L1Q9UHC9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms