Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 RNU6-625P-201ENST00000459412 107 ntBASIC2.59□□□□□ -1.99
COL20A1Q9P218 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.59□□□□□ -1.99
COL20A1Q9P218 ATP5EP1-201ENST00000510257 156 ntBASIC2.59□□□□□ -1.99
COL20A1Q9P218 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.59□□□□□ -1.99
COL20A1Q9P218 AC026271.5-201ENST00000577873 130 ntBASIC2.59□□□□□ -1.99
COL20A1Q9P218 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.59□□□□□ -1.99
COL20A1Q9P218 AP006437.1-201ENST00000641440 3685 ntBASIC2.59□□□□□ -2
COL20A1Q9P218 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
COL20A1Q9P218 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.59□□□□□ -2
COL20A1Q9P218 AC009487.4-201ENST00000624969 3585 ntBASIC2.58□□□□□ -2
COL20A1Q9P218 RNU6-545P-201ENST00000362681 104 ntBASIC2.58□□□□□ -2
COL20A1Q9P218 Y_RNA.153-201ENST00000363615 91 ntBASIC2.58□□□□□ -2
COL20A1Q9P218 RNU1-109P-201ENST00000383960 147 ntBASIC2.58□□□□□ -2
COL20A1Q9P218 MIR221-201ENST00000385135 110 ntBASIC2.58□□□□□ -2
COL20A1Q9P218 MIR548F4-201ENST00000408515 105 ntBASIC2.58□□□□□ -2
COL20A1Q9P218 RPL19P1-201ENST00000411635 428 ntBASIC2.58□□□□□ -2
COL20A1Q9P218 EDDM3CP-201ENST00000415977 425 ntBASIC2.58□□□□□ -2
COL20A1Q9P218 AC245102.2-201ENST00000448956 180 ntBASIC2.58□□□□□ -2
COL20A1Q9P218 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.58□□□□□ -2
COL20A1Q9P218 AC093259.1-201ENST00000509755 300 ntBASIC2.58□□□□□ -2
COL20A1Q9P218 RNU6-408P-201ENST00000515910 100 ntBASIC2.58□□□□□ -2
COL20A1Q9P218 RNU6-107P-201ENST00000516643 102 ntBASIC2.58□□□□□ -2
COL20A1Q9P218 AC131281.1-201ENST00000522984 164 ntBASIC2.58□□□□□ -2
COL20A1Q9P218 CYCSP26-201ENST00000534107 320 ntBASIC2.58□□□□□ -2
COL20A1Q9P218 AC018448.1-201ENST00000552843 316 ntBASIC2.58□□□□□ -2
COL20A1Q9P218 AL117187.1-201ENST00000555482 181 ntBASIC2.58□□□□□ -2
COL20A1Q9P218 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.58□□□□□ -2
COL20A1Q9P218 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.58□□□□□ -2
COL20A1Q9P218 MIR6766-201ENST00000622641 72 ntBASIC2.58□□□□□ -2
COL20A1Q9P218 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.58□□□□□ -2
COL20A1Q9P218 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.58□□□□□ -2
COL20A1Q9P218 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
COL20A1Q9P218 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.57□□□□□ -2
COL20A1Q9P218 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.57□□□□□ -2
COL20A1Q9P218 RNU1-91P-201ENST00000364746 163 ntBASIC2.57□□□□□ -2
COL20A1Q9P218 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.57□□□□□ -2
COL20A1Q9P218 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.57□□□□□ -2
COL20A1Q9P218 AL358176.2-201ENST00000425769 204 ntBASIC2.57□□□□□ -2
COL20A1Q9P218 HMGN2P9-201ENST00000476875 229 ntBASIC2.57□□□□□ -2
COL20A1Q9P218 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.57□□□□□ -2
COL20A1Q9P218 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.57□□□□□ -2
COL20A1Q9P218 RNU6-1143P-201ENST00000516125 104 ntBASIC2.57□□□□□ -2
COL20A1Q9P218 RNU6-991P-201ENST00000516168 107 ntBASIC2.57□□□□□ -2
COL20A1Q9P218 SNORA40.15-201ENST00000516884 107 ntBASIC2.57□□□□□ -2
COL20A1Q9P218 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.57□□□□□ -2
COL20A1Q9P218 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.57□□□□□ -2
COL20A1Q9P218 MIR3126-201ENST00000577443 74 ntBASIC2.57□□□□□ -2
COL20A1Q9P218 PRR13P7-201ENST00000605538 430 ntBASIC2.57□□□□□ -2
COL20A1Q9P218 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.57□□□□□ -2
COL20A1Q9P218 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
COL20A1Q9P218 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
COL20A1Q9P218 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.56□□□□□ -2
COL20A1Q9P218 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.56□□□□□ -2
COL20A1Q9P218 Y_RNA.183-201ENST00000363882 113 ntBASIC2.56□□□□□ -2
COL20A1Q9P218 SNORD87-201ENST00000364849 89 ntBASIC2.56□□□□□ -2
COL20A1Q9P218 Y_RNA.332-201ENST00000365271 113 ntBASIC2.56□□□□□ -2
COL20A1Q9P218 RNU6-1264P-201ENST00000383891 107 ntBASIC2.56□□□□□ -2
COL20A1Q9P218 SNORA64-201ENST00000384674 134 ntBASIC2.56□□□□□ -2
COL20A1Q9P218 AL023284.1-201ENST00000403956 276 ntBASIC2.56□□□□□ -2
COL20A1Q9P218 RNA5SP475-201ENST00000410568 110 ntBASIC2.56□□□□□ -2
COL20A1Q9P218 RNA5SP504-201ENST00000410676 117 ntBASIC2.56□□□□□ -2
COL20A1Q9P218 AC123900.1-201ENST00000420390 96 ntBASIC2.56□□□□□ -2
COL20A1Q9P218 TOMM22P2-201ENST00000430735 237 ntBASIC2.56□□□□□ -2
COL20A1Q9P218 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.56□□□□□ -2
COL20A1Q9P218 PRELID3BP1-201ENST00000457142 540 ntBASIC2.56□□□□□ -2
COL20A1Q9P218 snoU13.15-201ENST00000459407 104 ntBASIC2.56□□□□□ -2
COL20A1Q9P218 SNORA4.4-201ENST00000515921 135 ntBASIC2.56□□□□□ -2
COL20A1Q9P218 RNU6-948P-201ENST00000516374 107 ntBASIC2.56□□□□□ -2
COL20A1Q9P218 RNU2-34P-201ENST00000516534 121 ntBASIC2.56□□□□□ -2
COL20A1Q9P218 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.56□□□□□ -2
COL20A1Q9P218 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.56□□□□□ -2
COL20A1Q9P218 AL357075.2-201ENST00000614906 189 ntBASIC2.56□□□□□ -2
COL20A1Q9P218 MIR6715A-201ENST00000615929 79 ntBASIC2.56□□□□□ -2
COL20A1Q9P218 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.56□□□□□ -2
COL20A1Q9P218 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.56□□□□□ -2
COL20A1Q9P218 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
COL20A1Q9P218 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.55□□□□□ -2
COL20A1Q9P218 VTRNA1-1-201ENST00000363120 99 ntBASIC2.55□□□□□ -2
COL20A1Q9P218 Y_RNA.99-201ENST00000363138 105 ntBASIC2.55□□□□□ -2
COL20A1Q9P218 Y_RNA.133-201ENST00000363428 110 ntBASIC2.55□□□□□ -2
COL20A1Q9P218 Y_RNA.210-201ENST00000364161 110 ntBASIC2.55□□□□□ -2
COL20A1Q9P218 Y_RNA.230-201ENST00000364348 109 ntBASIC2.55□□□□□ -2
COL20A1Q9P218 RNU6-1105P-201ENST00000384774 107 ntBASIC2.55□□□□□ -2
COL20A1Q9P218 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.55□□□□□ -2
COL20A1Q9P218 ELOCP21-201ENST00000412558 336 ntBASIC2.55□□□□□ -2
COL20A1Q9P218 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.55□□□□□ -2
COL20A1Q9P218 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.55□□□□□ -2
COL20A1Q9P218 RPL26P26-201ENST00000480251 434 ntBASIC2.55□□□□□ -2
COL20A1Q9P218 MRPS35P2-201ENST00000508242 191 ntBASIC2.55□□□□□ -2
COL20A1Q9P218 RNU6-1046P-201ENST00000516538 107 ntBASIC2.55□□□□□ -2
COL20A1Q9P218 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.55□□□□□ -2
COL20A1Q9P218 PRELID2P1-201ENST00000552837 301 ntBASIC2.55□□□□□ -2
COL20A1Q9P218 MIR4658-201ENST00000584344 65 ntBASIC2.55□□□□□ -2
COL20A1Q9P218 AC025754.2-201ENST00000606491 432 ntBASIC2.55□□□□□ -2
COL20A1Q9P218 AC011476.5-201ENST00000615594 130 ntBASIC2.55□□□□□ -2
COL20A1Q9P218 MIR410-201ENST00000362222 80 ntBASIC2.54□□□□□ -2
COL20A1Q9P218 Y_RNA.462-201ENST00000384268 102 ntBASIC2.54□□□□□ -2
COL20A1Q9P218 RNU6-975P-201ENST00000384296 105 ntBASIC2.54□□□□□ -2
COL20A1Q9P218 SNORA67.3-201ENST00000384366 140 ntBASIC2.54□□□□□ -2
COL20A1Q9P218 RNU5A-5P-201ENST00000411054 116 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 157.7 ms