Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AL133173.2-201ENST00000614270 90 ntBASIC0.12□□□□□ -2.39
PHRF1Q9P1Y6 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.12□□□□□ -2.39
PHRF1Q9P1Y6 AC006927.3-201ENST00000638789 384 ntBASIC0.12□□□□□ -2.39
PHRF1Q9P1Y6 MIR103A2-201ENST00000362154 78 ntBASIC0.11□□□□□ -2.39
PHRF1Q9P1Y6 RNU6-923P-201ENST00000364753 107 ntBASIC0.11□□□□□ -2.39
PHRF1Q9P1Y6 MTCO2P23-201ENST00000425216 680 ntBASIC0.11□□□□□ -2.39
PHRF1Q9P1Y6 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.11□□□□□ -2.39
PHRF1Q9P1Y6 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.11□□□□□ -2.39
PHRF1Q9P1Y6 AC004386.2-201ENST00000441858 148 ntBASIC0.11□□□□□ -2.39
PHRF1Q9P1Y6 MTCO2P3-201ENST00000442543 421 ntBASIC0.11□□□□□ -2.39
PHRF1Q9P1Y6 NDUFB4P10-201ENST00000452541 359 ntBASIC0.11□□□□□ -2.39
PHRF1Q9P1Y6 AC245047.8-201ENST00000456455 284 ntBASIC0.11□□□□□ -2.39
PHRF1Q9P1Y6 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.11□□□□□ -2.39
PHRF1Q9P1Y6 AC010493.1-201ENST00000513479 292 ntBASIC0.11□□□□□ -2.39
PHRF1Q9P1Y6 AC105417.1-201ENST00000514691 285 ntBASIC0.11□□□□□ -2.39
PHRF1Q9P1Y6 AC069113.1-201ENST00000517763 267 ntBASIC0.11□□□□□ -2.39
PHRF1Q9P1Y6 AC022868.1-201ENST00000517767 391 ntBASIC0.11□□□□□ -2.39
PHRF1Q9P1Y6 MIR4509-3-201ENST00000578671 94 ntBASIC0.11□□□□□ -2.39
PHRF1Q9P1Y6 MIR4509-2-201ENST00000583920 94 ntBASIC0.11□□□□□ -2.39
PHRF1Q9P1Y6 AL136317.1-201ENST00000612653 226 ntBASIC0.11□□□□□ -2.39
PHRF1Q9P1Y6 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
PHRF1Q9P1Y6 MIR4509-1-201ENST00000618224 94 ntBASIC0.11□□□□□ -2.39
PHRF1Q9P1Y6 7SK.10-201ENST00000621414 298 ntBASIC0.11□□□□□ -2.39
PHRF1Q9P1Y6 SEPT14P19-203ENST00000633205 211 ntBASIC0.11□□□□□ -2.39
PHRF1Q9P1Y6 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
PHRF1Q9P1Y6 Y_RNA.22-201ENST00000362492 102 ntBASIC0.1□□□□□ -2.39
PHRF1Q9P1Y6 RNU6-833P-201ENST00000363486 107 ntBASIC0.1□□□□□ -2.39
PHRF1Q9P1Y6 RNU6-169P-201ENST00000365336 107 ntBASIC0.1□□□□□ -2.39
PHRF1Q9P1Y6 RNU6-108P-201ENST00000365558 107 ntBASIC0.1□□□□□ -2.39
PHRF1Q9P1Y6 RNU6-1029P-201ENST00000384109 107 ntBASIC0.1□□□□□ -2.39
PHRF1Q9P1Y6 MIR1185-2-201ENST00000408687 86 ntBASIC0.1□□□□□ -2.39
PHRF1Q9P1Y6 MTCO2P12-201ENST00000427426 682 ntBASIC0.1□□□□□ -2.39
PHRF1Q9P1Y6 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.1□□□□□ -2.39
PHRF1Q9P1Y6 GMFBP1-201ENST00000467831 427 ntBASIC0.1□□□□□ -2.39
PHRF1Q9P1Y6 OR9P1P-201ENST00000496431 281 ntBASIC0.1□□□□□ -2.39
PHRF1Q9P1Y6 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.1□□□□□ -2.39
PHRF1Q9P1Y6 Y_RNA.672-201ENST00000516289 104 ntBASIC0.1□□□□□ -2.39
PHRF1Q9P1Y6 RNU6-344P-201ENST00000516635 111 ntBASIC0.1□□□□□ -2.39
PHRF1Q9P1Y6 RNU6-323P-201ENST00000521915 107 ntBASIC0.1□□□□□ -2.39
PHRF1Q9P1Y6 AC026470.2-201ENST00000561492 181 ntBASIC0.1□□□□□ -2.39
PHRF1Q9P1Y6 MIR4775-201ENST00000581168 75 ntBASIC0.1□□□□□ -2.39
PHRF1Q9P1Y6 AL162730.1-201ENST00000605734 292 ntBASIC0.1□□□□□ -2.39
PHRF1Q9P1Y6 AL139418.1-201ENST00000613613 177 ntBASIC0.1□□□□□ -2.39
PHRF1Q9P1Y6 AC019226.2-201ENST00000625973 424 ntBASIC0.1□□□□□ -2.39
PHRF1Q9P1Y6 Y_RNA.185-201ENST00000363894 100 ntBASIC0.09□□□□□ -2.39
PHRF1Q9P1Y6 RNU6-1305P-201ENST00000364353 104 ntBASIC0.09□□□□□ -2.39
PHRF1Q9P1Y6 Y_RNA.330-201ENST00000365230 109 ntBASIC0.09□□□□□ -2.39
PHRF1Q9P1Y6 RNU6-827P-201ENST00000365553 106 ntBASIC0.09□□□□□ -2.39
PHRF1Q9P1Y6 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.09□□□□□ -2.39
PHRF1Q9P1Y6 SNORA20.2-201ENST00000383922 131 ntBASIC0.09□□□□□ -2.39
PHRF1Q9P1Y6 RNU6-809P-201ENST00000384461 107 ntBASIC0.09□□□□□ -2.39
PHRF1Q9P1Y6 MIR562-201ENST00000384894 95 ntBASIC0.09□□□□□ -2.39
PHRF1Q9P1Y6 MIR1-2-201ENST00000384961 85 ntBASIC0.09□□□□□ -2.39
PHRF1Q9P1Y6 SNORA16.2-201ENST00000390991 127 ntBASIC0.09□□□□□ -2.39
PHRF1Q9P1Y6 SNORD70.1-201ENST00000391007 85 ntBASIC0.09□□□□□ -2.39
PHRF1Q9P1Y6 RNU6-550P-201ENST00000391057 101 ntBASIC0.09□□□□□ -2.39
PHRF1Q9P1Y6 RNU6-57P-201ENST00000411348 103 ntBASIC0.09□□□□□ -2.39
PHRF1Q9P1Y6 TIMM9P3-201ENST00000428659 274 ntBASIC0.09□□□□□ -2.39
PHRF1Q9P1Y6 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.09□□□□□ -2.39
PHRF1Q9P1Y6 AC079781.2-201ENST00000446424 169 ntBASIC0.09□□□□□ -2.39
PHRF1Q9P1Y6 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.09□□□□□ -2.39
PHRF1Q9P1Y6 RNU6-1096P-201ENST00000517089 102 ntBASIC0.09□□□□□ -2.39
PHRF1Q9P1Y6 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.09□□□□□ -2.39
PHRF1Q9P1Y6 AP001372.4-201ENST00000524889 472 ntBASIC0.09□□□□□ -2.39
PHRF1Q9P1Y6 AC025449.1-201ENST00000603896 529 ntBASIC0.09□□□□□ -2.39
PHRF1Q9P1Y6 AC097065.2-201ENST00000608159 533 ntBASIC0.09□□□□□ -2.39
PHRF1Q9P1Y6 AC073349.3-201ENST00000617616 186 ntBASIC0.09□□□□□ -2.39
PHRF1Q9P1Y6 MIR4315-1-201ENST00000636800 73 ntBASIC0.09□□□□□ -2.39
PHRF1Q9P1Y6 MIR4315-2-201ENST00000640925 73 ntBASIC0.09□□□□□ -2.39
PHRF1Q9P1Y6 SNORD114-16-201ENST00000363044 70 ntBASIC0.09□□□□□ -2.4
PHRF1Q9P1Y6 RNU6-1097P-201ENST00000363586 107 ntBASIC0.09□□□□□ -2.4
PHRF1Q9P1Y6 SNORD113.3-201ENST00000364630 78 ntBASIC0.09□□□□□ -2.4
PHRF1Q9P1Y6 RNU6-424P-201ENST00000384367 105 ntBASIC0.09□□□□□ -2.4
PHRF1Q9P1Y6 RNU6-83P-201ENST00000384568 112 ntBASIC0.09□□□□□ -2.4
PHRF1Q9P1Y6 SNORA8.3-201ENST00000384679 139 ntBASIC0.09□□□□□ -2.4
PHRF1Q9P1Y6 MIR891A-201ENST00000401237 79 ntBASIC0.09□□□□□ -2.4
PHRF1Q9P1Y6 MTCYBP10-201ENST00000424905 650 ntBASIC0.09□□□□□ -2.4
PHRF1Q9P1Y6 AC084290.1-201ENST00000434995 374 ntBASIC0.09□□□□□ -2.4
PHRF1Q9P1Y6 MTCO3P8-201ENST00000453691 755 ntBASIC0.09□□□□□ -2.4
PHRF1Q9P1Y6 AL049830.1-201ENST00000468034 425 ntBASIC0.09□□□□□ -2.4
PHRF1Q9P1Y6 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.09□□□□□ -2.4
PHRF1Q9P1Y6 AC091133.4-201ENST00000511142 308 ntBASIC0.09□□□□□ -2.4
PHRF1Q9P1Y6 SNORA70.12-201ENST00000516084 153 ntBASIC0.09□□□□□ -2.4
PHRF1Q9P1Y6 AC027419.1-201ENST00000522976 328 ntBASIC0.09□□□□□ -2.4
PHRF1Q9P1Y6 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
PHRF1Q9P1Y6 AC011195.1-201ENST00000578177 177 ntBASIC0.09□□□□□ -2.4
PHRF1Q9P1Y6 MIR4493-201ENST00000584016 73 ntBASIC0.09□□□□□ -2.4
PHRF1Q9P1Y6 AC069431.2-201ENST00000604149 1099 ntBASIC0.09□□□□□ -2.4
PHRF1Q9P1Y6 AC138749.5-201ENST00000611461 208 ntBASIC0.09□□□□□ -2.4
PHRF1Q9P1Y6 AC005562.2-201ENST00000618264 111 ntBASIC0.09□□□□□ -2.4
PHRF1Q9P1Y6 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.09□□□□□ -2.4
PHRF1Q9P1Y6 SNORA33-201ENST00000363664 130 ntBASIC0.08□□□□□ -2.4
PHRF1Q9P1Y6 RNU6-501P-201ENST00000364072 100 ntBASIC0.08□□□□□ -2.4
PHRF1Q9P1Y6 MIR518A1-201ENST00000385068 85 ntBASIC0.08□□□□□ -2.4
PHRF1Q9P1Y6 U8.16-201ENST00000391279 133 ntBASIC0.08□□□□□ -2.4
PHRF1Q9P1Y6 CALM2P3-201ENST00000400429 449 ntBASIC0.08□□□□□ -2.4
PHRF1Q9P1Y6 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.08□□□□□ -2.4
PHRF1Q9P1Y6 AC008134.1-201ENST00000420943 193 ntBASIC0.08□□□□□ -2.4
PHRF1Q9P1Y6 AL365184.2-201ENST00000431139 435 ntBASIC0.08□□□□□ -2.4
PHRF1Q9P1Y6 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms