Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.09□□□□□ -1.92
TLR9Q9NR96 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.09□□□□□ -1.92
TLR9Q9NR96 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.08□□□□□ -1.92
TLR9Q9NR96 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.08□□□□□ -1.92
TLR9Q9NR96 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TLR9Q9NR96 RNU4-80P-201ENST00000363200 141 ntBASIC3.08□□□□□ -1.92
TLR9Q9NR96 RNU6-1210P-201ENST00000363775 107 ntBASIC3.08□□□□□ -1.92
TLR9Q9NR96 Y_RNA.179-201ENST00000363844 90 ntBASIC3.08□□□□□ -1.92
TLR9Q9NR96 Y_RNA.304-201ENST00000365011 112 ntBASIC3.08□□□□□ -1.92
TLR9Q9NR96 RNU6-245P-201ENST00000384020 107 ntBASIC3.08□□□□□ -1.92
TLR9Q9NR96 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.08□□□□□ -1.92
TLR9Q9NR96 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.08□□□□□ -1.92
TLR9Q9NR96 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.08□□□□□ -1.92
TLR9Q9NR96 AC091179.3-201ENST00000474761 144 ntBASIC3.08□□□□□ -1.92
TLR9Q9NR96 AL121594.1-201ENST00000475906 575 ntBASIC3.08□□□□□ -1.92
TLR9Q9NR96 RPL23AP70-201ENST00000483361 460 ntBASIC3.08□□□□□ -1.92
TLR9Q9NR96 AC006483.1-201ENST00000487308 313 ntBASIC3.08□□□□□ -1.92
TLR9Q9NR96 RNU6-191P-201ENST00000516295 94 ntBASIC3.08□□□□□ -1.92
TLR9Q9NR96 AP002001.1-203ENST00000534002 267 ntBASIC3.08□□□□□ -1.92
TLR9Q9NR96 AC004832.4-201ENST00000608952 331 ntBASIC3.08□□□□□ -1.92
TLR9Q9NR96 AC091932.3-201ENST00000624223 323 ntBASIC3.08□□□□□ -1.92
TLR9Q9NR96 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TLR9Q9NR96 AC008264.2-201ENST00000610193 3731 ntBASIC3.08□□□□□ -1.92
TLR9Q9NR96 AP003122.5-201ENST00000527668 3766 ntBASIC3.08□□□□□ -1.92
TLR9Q9NR96 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TLR9Q9NR96 Y_RNA.8-201ENST00000362353 102 ntBASIC3.07□□□□□ -1.92
TLR9Q9NR96 RNU4-15P-201ENST00000362613 141 ntBASIC3.07□□□□□ -1.92
TLR9Q9NR96 RNU6-655P-201ENST00000362858 107 ntBASIC3.07□□□□□ -1.92
TLR9Q9NR96 RNU6-653P-201ENST00000363074 106 ntBASIC3.07□□□□□ -1.92
TLR9Q9NR96 SNORA72.2-201ENST00000365028 127 ntBASIC3.07□□□□□ -1.92
TLR9Q9NR96 RNU6-211P-201ENST00000384047 107 ntBASIC3.07□□□□□ -1.92
TLR9Q9NR96 RNA5SP354-201ENST00000391247 136 ntBASIC3.07□□□□□ -1.92
TLR9Q9NR96 RNU5E-9P-201ENST00000411164 104 ntBASIC3.07□□□□□ -1.92
TLR9Q9NR96 AL451074.5-201ENST00000415894 435 ntBASIC3.07□□□□□ -1.92
TLR9Q9NR96 AC009414.1-201ENST00000427200 443 ntBASIC3.07□□□□□ -1.92
TLR9Q9NR96 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.07□□□□□ -1.92
TLR9Q9NR96 AL513328.1-201ENST00000446460 224 ntBASIC3.07□□□□□ -1.92
TLR9Q9NR96 RPL36AP48-201ENST00000485521 314 ntBASIC3.07□□□□□ -1.92
TLR9Q9NR96 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.07□□□□□ -1.92
TLR9Q9NR96 RNA5SP217-201ENST00000515959 91 ntBASIC3.07□□□□□ -1.92
TLR9Q9NR96 CYCSP23-201ENST00000519781 313 ntBASIC3.07□□□□□ -1.92
TLR9Q9NR96 AP005660.1-201ENST00000522972 293 ntBASIC3.07□□□□□ -1.92
TLR9Q9NR96 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.07□□□□□ -1.92
TLR9Q9NR96 PCGEM1.1-201ENST00000613431 131 ntBASIC3.07□□□□□ -1.92
TLR9Q9NR96 MIR7111-201ENST00000619751 72 ntBASIC3.07□□□□□ -1.92
TLR9Q9NR96 AL365265.1-201ENST00000621045 234 ntBASIC3.07□□□□□ -1.92
TLR9Q9NR96 snoU18.1-201ENST00000629629 71 ntBASIC3.07□□□□□ -1.92
TLR9Q9NR96 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TLR9Q9NR96 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TLR9Q9NR96 Y_RNA.262-201ENST00000364641 102 ntBASIC3.06□□□□□ -1.92
TLR9Q9NR96 RNU6-793P-201ENST00000384233 104 ntBASIC3.06□□□□□ -1.92
TLR9Q9NR96 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.06□□□□□ -1.92
TLR9Q9NR96 RPL32P35-201ENST00000415214 394 ntBASIC3.06□□□□□ -1.92
TLR9Q9NR96 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.06□□□□□ -1.92
TLR9Q9NR96 AC024067.1-201ENST00000426199 223 ntBASIC3.06□□□□□ -1.92
TLR9Q9NR96 IFNA11P-201ENST00000446352 526 ntBASIC3.06□□□□□ -1.92
TLR9Q9NR96 RPS3P1-201ENST00000456781 192 ntBASIC3.06□□□□□ -1.92
TLR9Q9NR96 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.06□□□□□ -1.92
TLR9Q9NR96 RNA5SP24-201ENST00000516478 95 ntBASIC3.06□□□□□ -1.92
TLR9Q9NR96 MIR5692C2-201ENST00000577959 77 ntBASIC3.06□□□□□ -1.92
TLR9Q9NR96 SNORD53-201ENST00000579969 78 ntBASIC3.06□□□□□ -1.92
TLR9Q9NR96 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.06□□□□□ -1.92
TLR9Q9NR96 AL133393.1-201ENST00000603277 287 ntBASIC3.06□□□□□ -1.92
TLR9Q9NR96 AC108706.1-201ENST00000611053 297 ntBASIC3.06□□□□□ -1.92
TLR9Q9NR96 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.06□□□□□ -1.92
TLR9Q9NR96 AC004467.1-201ENST00000615678 330 ntBASIC3.06□□□□□ -1.92
TLR9Q9NR96 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.06□□□□□ -1.92
TLR9Q9NR96 AC110079.1-202ENST00000635213 138 ntBASIC3.06□□□□□ -1.92
TLR9Q9NR96 AC099654.7-201ENST00000635788 2127 ntBASIC3.06□□□□□ -1.92
TLR9Q9NR96 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.06□□□□□ -1.92
TLR9Q9NR96 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.06□□□□□ -1.92
TLR9Q9NR96 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TLR9Q9NR96 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
TLR9Q9NR96 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.05□□□□□ -1.92
TLR9Q9NR96 FAM35CP-201ENST00000554755 2470 ntBASIC3.05□□□□□ -1.92
TLR9Q9NR96 AC091564.4-201ENST00000533934 2194 ntBASIC3.05□□□□□ -1.92
TLR9Q9NR96 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.05□□□□□ -1.92
TLR9Q9NR96 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
TLR9Q9NR96 Y_RNA.441-201ENST00000384123 112 ntBASIC3.05□□□□□ -1.92
TLR9Q9NR96 Y_RNA.498-201ENST00000384460 102 ntBASIC3.05□□□□□ -1.92
TLR9Q9NR96 SNORA46-201ENST00000384762 135 ntBASIC3.05□□□□□ -1.92
TLR9Q9NR96 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
TLR9Q9NR96 AL512633.1-201ENST00000399931 655 ntBASIC3.05□□□□□ -1.92
TLR9Q9NR96 RNA5SP274-201ENST00000410484 108 ntBASIC3.05□□□□□ -1.92
TLR9Q9NR96 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.05□□□□□ -1.92
TLR9Q9NR96 snoU13.23-201ENST00000458863 104 ntBASIC3.05□□□□□ -1.92
TLR9Q9NR96 AC103975.1-201ENST00000482506 483 ntBASIC3.05□□□□□ -1.92
TLR9Q9NR96 AL713866.2-201ENST00000603579 219 ntBASIC3.05□□□□□ -1.92
TLR9Q9NR96 AL008718.3-201ENST00000610217 321 ntBASIC3.05□□□□□ -1.92
TLR9Q9NR96 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.05□□□□□ -1.92
TLR9Q9NR96 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.05□□□□□ -1.92
TLR9Q9NR96 AC092593.1-201ENST00000515413 1815 ntBASIC3.05□□□□□ -1.92
TLR9Q9NR96 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
TLR9Q9NR96 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TLR9Q9NR96 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.04□□□□□ -1.92
TLR9Q9NR96 RNU6-81P-201ENST00000365608 104 ntBASIC3.04□□□□□ -1.92
TLR9Q9NR96 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.04□□□□□ -1.92
TLR9Q9NR96 AL357139.1-201ENST00000407792 426 ntBASIC3.04□□□□□ -1.92
TLR9Q9NR96 MIR320B2-201ENST00000408479 138 ntBASIC3.04□□□□□ -1.92
TLR9Q9NR96 AL603825.1-201ENST00000438481 80 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms