Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AL353149.1-201ENST00000610667 244 ntBASIC1.87□□□□□ -2.11
CHMP1AQ9HD42 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.87□□□□□ -2.11
CHMP1AQ9HD42 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.87□□□□□ -2.11
CHMP1AQ9HD42 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.87□□□□□ -2.11
CHMP1AQ9HD42 AC008555.8-201ENST00000623602 2168 ntBASIC1.87□□□□□ -2.11
CHMP1AQ9HD42 AC243829.7-201ENST00000633081 225 ntBASIC1.87□□□□□ -2.11
CHMP1AQ9HD42 MIR338-201ENST00000636369 67 ntBASIC1.87□□□□□ -2.11
CHMP1AQ9HD42 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CHMP1AQ9HD42 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CHMP1AQ9HD42 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CHMP1AQ9HD42 SNORA80A-201ENST00000363922 136 ntBASIC1.86□□□□□ -2.11
CHMP1AQ9HD42 Y_RNA.605-201ENST00000410577 105 ntBASIC1.86□□□□□ -2.11
CHMP1AQ9HD42 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.86□□□□□ -2.11
CHMP1AQ9HD42 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.86□□□□□ -2.11
CHMP1AQ9HD42 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.86□□□□□ -2.11
CHMP1AQ9HD42 UQCRBP2-201ENST00000447827 297 ntBASIC1.86□□□□□ -2.11
CHMP1AQ9HD42 AC108938.1-201ENST00000451204 136 ntBASIC1.86□□□□□ -2.11
CHMP1AQ9HD42 PCNPP5-201ENST00000452246 481 ntBASIC1.86□□□□□ -2.11
CHMP1AQ9HD42 AC025033.1-201ENST00000463883 194 ntBASIC1.86□□□□□ -2.11
CHMP1AQ9HD42 CYCSP23-201ENST00000519781 313 ntBASIC1.86□□□□□ -2.11
CHMP1AQ9HD42 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.86□□□□□ -2.11
CHMP1AQ9HD42 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.86□□□□□ -2.11
CHMP1AQ9HD42 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.86□□□□□ -2.11
CHMP1AQ9HD42 AL050343.2-201ENST00000607338 280 ntBASIC1.86□□□□□ -2.11
CHMP1AQ9HD42 AL627230.6-201ENST00000611129 280 ntBASIC1.86□□□□□ -2.11
CHMP1AQ9HD42 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CHMP1AQ9HD42 Y_RNA.252-201ENST00000364556 101 ntBASIC1.85□□□□□ -2.11
CHMP1AQ9HD42 Y_RNA.287-201ENST00000364853 94 ntBASIC1.85□□□□□ -2.11
CHMP1AQ9HD42 Y_RNA.428-201ENST00000384078 102 ntBASIC1.85□□□□□ -2.11
CHMP1AQ9HD42 MIR483-201ENST00000385070 76 ntBASIC1.85□□□□□ -2.11
CHMP1AQ9HD42 MIR221-201ENST00000385135 110 ntBASIC1.85□□□□□ -2.11
CHMP1AQ9HD42 SNORA11.1-201ENST00000408133 129 ntBASIC1.85□□□□□ -2.11
CHMP1AQ9HD42 RNA5SP338-201ENST00000410495 85 ntBASIC1.85□□□□□ -2.11
CHMP1AQ9HD42 Z92545.1-201ENST00000411782 234 ntBASIC1.85□□□□□ -2.11
CHMP1AQ9HD42 AC244636.1-201ENST00000421152 228 ntBASIC1.85□□□□□ -2.11
CHMP1AQ9HD42 AL021397.1-201ENST00000451806 248 ntBASIC1.85□□□□□ -2.11
CHMP1AQ9HD42 AC010409.1-201ENST00000487382 476 ntBASIC1.85□□□□□ -2.11
CHMP1AQ9HD42 RNA5SP281-201ENST00000516504 135 ntBASIC1.85□□□□□ -2.11
CHMP1AQ9HD42 RNU6-107P-201ENST00000516643 102 ntBASIC1.85□□□□□ -2.11
CHMP1AQ9HD42 SNORD116.3-201ENST00000517176 78 ntBASIC1.85□□□□□ -2.11
CHMP1AQ9HD42 AP002001.1-203ENST00000534002 267 ntBASIC1.85□□□□□ -2.11
CHMP1AQ9HD42 CTSLP2-204ENST00000629029 392 ntBASIC1.85□□□□□ -2.11
CHMP1AQ9HD42 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.85□□□□□ -2.11
CHMP1AQ9HD42 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 ZNF72P-201ENST00000425869 1908 ntBASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 snoU2-30.2-201ENST00000362805 70 ntBASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 Y_RNA.61-201ENST00000362835 102 ntBASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 SNORA33-201ENST00000363664 130 ntBASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 Y_RNA.197-201ENST00000364004 102 ntBASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 RNU1-96P-201ENST00000364163 162 ntBASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 RNU6-1240P-201ENST00000365155 104 ntBASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 RNU6-708P-201ENST00000384217 107 ntBASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 RNA5SP212-201ENST00000391223 107 ntBASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 SNORD12B-201ENST00000410433 91 ntBASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 AC009310.1-201ENST00000414414 451 ntBASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 AC245047.4-201ENST00000433189 144 ntBASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 AC007677.1-201ENST00000445757 515 ntBASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 RPL23AP7-203ENST00000449021 469 ntBASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 AC074133.1-201ENST00000515696 183 ntBASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 SNORA40.9-201ENST00000515895 93 ntBASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 AC018448.1-201ENST00000552843 316 ntBASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 AL442163.3-201ENST00000554110 156 ntBASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 AC022254.1-201ENST00000567857 235 ntBASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 AL080274.1-201ENST00000605565 220 ntBASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 U2.1-201ENST00000618978 145 ntBASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 AC009831.4-201ENST00000620744 325 ntBASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.84□□□□□ -2.11
CHMP1AQ9HD42 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.84□□□□□ -2.12
CHMP1AQ9HD42 RNU6-112P-201ENST00000363599 104 ntBASIC1.83□□□□□ -2.12
CHMP1AQ9HD42 RNU6-1264P-201ENST00000383891 107 ntBASIC1.83□□□□□ -2.12
CHMP1AQ9HD42 RNU6-417P-201ENST00000384712 107 ntBASIC1.83□□□□□ -2.12
CHMP1AQ9HD42 AC008134.1-201ENST00000420943 193 ntBASIC1.83□□□□□ -2.12
CHMP1AQ9HD42 AC018865.2-201ENST00000423631 129 ntBASIC1.83□□□□□ -2.12
CHMP1AQ9HD42 TOMM22P2-201ENST00000430735 237 ntBASIC1.83□□□□□ -2.12
CHMP1AQ9HD42 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.83□□□□□ -2.12
CHMP1AQ9HD42 MRPS17P9-201ENST00000511924 393 ntBASIC1.83□□□□□ -2.12
CHMP1AQ9HD42 Y_RNA.661-201ENST00000516003 99 ntBASIC1.83□□□□□ -2.12
CHMP1AQ9HD42 RNU6-976P-201ENST00000516086 111 ntBASIC1.83□□□□□ -2.12
CHMP1AQ9HD42 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.83□□□□□ -2.12
CHMP1AQ9HD42 AC005034.5-201ENST00000604219 466 ntBASIC1.83□□□□□ -2.12
CHMP1AQ9HD42 AC012493.3-201ENST00000604494 112 ntBASIC1.83□□□□□ -2.12
CHMP1AQ9HD42 AC010900.2-201ENST00000604508 210 ntBASIC1.83□□□□□ -2.12
CHMP1AQ9HD42 MIR4272-201ENST00000635924 64 ntBASIC1.83□□□□□ -2.12
CHMP1AQ9HD42 AC006026.1-201ENST00000444025 1803 ntBASIC1.82□□□□□ -2.12
CHMP1AQ9HD42 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.82□□□□□ -2.12
CHMP1AQ9HD42 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.82□□□□□ -2.12
CHMP1AQ9HD42 SNORD42.2-201ENST00000365570 69 ntBASIC1.82□□□□□ -2.12
CHMP1AQ9HD42 RNY3P4-201ENST00000384428 101 ntBASIC1.82□□□□□ -2.12
CHMP1AQ9HD42 RNU6-296P-201ENST00000384608 107 ntBASIC1.82□□□□□ -2.12
CHMP1AQ9HD42 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CHMP1AQ9HD42 SNORA11-201ENST00000408789 128 ntBASIC1.82□□□□□ -2.12
CHMP1AQ9HD42 CST2P1-201ENST00000425770 87 ntBASIC1.82□□□□□ -2.12
CHMP1AQ9HD42 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.82□□□□□ -2.12
CHMP1AQ9HD42 RPL23AP83-201ENST00000434984 473 ntBASIC1.82□□□□□ -2.12
CHMP1AQ9HD42 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.82□□□□□ -2.12
CHMP1AQ9HD42 RNU6-625P-201ENST00000459412 107 ntBASIC1.82□□□□□ -2.12
CHMP1AQ9HD42 RNA5SP57-201ENST00000459463 123 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms