Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 RNU4-73P-201ENST00000363164 141 ntBASIC1.43□□□□□ -2.18
NANOGQ9H9S0 RNU6-727P-201ENST00000363592 107 ntBASIC1.43□□□□□ -2.18
NANOGQ9H9S0 RNA5SP99-201ENST00000364020 114 ntBASIC1.43□□□□□ -2.18
NANOGQ9H9S0 RNU1-42P-201ENST00000364033 160 ntBASIC1.43□□□□□ -2.18
NANOGQ9H9S0 SNORD31B-201ENST00000364977 69 ntBASIC1.43□□□□□ -2.18
NANOGQ9H9S0 RNA5SP190-201ENST00000365222 118 ntBASIC1.43□□□□□ -2.18
NANOGQ9H9S0 MIR559-201ENST00000385188 96 ntBASIC1.43□□□□□ -2.18
NANOGQ9H9S0 AC123900.1-201ENST00000420390 96 ntBASIC1.43□□□□□ -2.18
NANOGQ9H9S0 CYCSP49-201ENST00000420810 319 ntBASIC1.43□□□□□ -2.18
NANOGQ9H9S0 AC244636.1-201ENST00000421152 228 ntBASIC1.43□□□□□ -2.18
NANOGQ9H9S0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.43□□□□□ -2.18
NANOGQ9H9S0 HSPE1P21-201ENST00000438283 308 ntBASIC1.43□□□□□ -2.18
NANOGQ9H9S0 RPL30P15-201ENST00000457129 321 ntBASIC1.43□□□□□ -2.18
NANOGQ9H9S0 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.43□□□□□ -2.18
NANOGQ9H9S0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.43□□□□□ -2.18
NANOGQ9H9S0 AC091179.3-201ENST00000474761 144 ntBASIC1.43□□□□□ -2.18
NANOGQ9H9S0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.43□□□□□ -2.18
NANOGQ9H9S0 RPS23P5-201ENST00000495419 428 ntBASIC1.43□□□□□ -2.18
NANOGQ9H9S0 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.43□□□□□ -2.18
NANOGQ9H9S0 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.43□□□□□ -2.18
NANOGQ9H9S0 MIR4795-201ENST00000584182 89 ntBASIC1.43□□□□□ -2.18
NANOGQ9H9S0 AL117336.2-201ENST00000602435 335 ntBASIC1.43□□□□□ -2.18
NANOGQ9H9S0 MZT1P2-201ENST00000604387 248 ntBASIC1.43□□□□□ -2.18
NANOGQ9H9S0 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.43□□□□□ -2.18
NANOGQ9H9S0 TCL6_2.1-201ENST00000615162 119 ntBASIC1.43□□□□□ -2.18
NANOGQ9H9S0 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.43□□□□□ -2.18
NANOGQ9H9S0 AP000648.3-201ENST00000623539 4507 ntBASIC1.43□□□□□ -2.18
NANOGQ9H9S0 RNA5SP361-201ENST00000362686 118 ntBASIC1.42□□□□□ -2.18
NANOGQ9H9S0 RNU1-17P-201ENST00000363022 152 ntBASIC1.42□□□□□ -2.18
NANOGQ9H9S0 Y_RNA.387-201ENST00000383918 102 ntBASIC1.42□□□□□ -2.18
NANOGQ9H9S0 Y_RNA.557-201ENST00000384680 107 ntBASIC1.42□□□□□ -2.18
NANOGQ9H9S0 MIR153-2-201ENST00000385225 87 ntBASIC1.42□□□□□ -2.18
NANOGQ9H9S0 RNY4P36-201ENST00000391116 96 ntBASIC1.42□□□□□ -2.18
NANOGQ9H9S0 SNORA75.6-201ENST00000391318 127 ntBASIC1.42□□□□□ -2.18
NANOGQ9H9S0 MIR190B-201ENST00000401119 79 ntBASIC1.42□□□□□ -2.18
NANOGQ9H9S0 AC007098.1-201ENST00000420122 367 ntBASIC1.42□□□□□ -2.18
NANOGQ9H9S0 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.42□□□□□ -2.18
NANOGQ9H9S0 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.42□□□□□ -2.18
NANOGQ9H9S0 CHEK2P4-201ENST00000450340 246 ntBASIC1.42□□□□□ -2.18
NANOGQ9H9S0 HMGN2P9-201ENST00000476875 229 ntBASIC1.42□□□□□ -2.18
NANOGQ9H9S0 AC132942.1-201ENST00000486753 483 ntBASIC1.42□□□□□ -2.18
NANOGQ9H9S0 AC105758.1-201ENST00000506038 399 ntBASIC1.42□□□□□ -2.18
NANOGQ9H9S0 AC022493.2-201ENST00000506122 481 ntBASIC1.42□□□□□ -2.18
NANOGQ9H9S0 RNVU1-2-201ENST00000516326 135 ntBASIC1.42□□□□□ -2.18
NANOGQ9H9S0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.42□□□□□ -2.18
NANOGQ9H9S0 AC026271.5-201ENST00000577873 130 ntBASIC1.42□□□□□ -2.18
NANOGQ9H9S0 MIR3683-201ENST00000580847 82 ntBASIC1.42□□□□□ -2.18
NANOGQ9H9S0 AC125232.2-201ENST00000592457 143 ntBASIC1.42□□□□□ -2.18
NANOGQ9H9S0 BX248123.2-201ENST00000606318 124 ntBASIC1.42□□□□□ -2.18
NANOGQ9H9S0 AL357075.2-201ENST00000614906 189 ntBASIC1.42□□□□□ -2.18
NANOGQ9H9S0 PISRT1.1-201ENST00000616930 107 ntBASIC1.42□□□□□ -2.18
NANOGQ9H9S0 AC087588.2-201ENST00000617667 426 ntBASIC1.42□□□□□ -2.18
NANOGQ9H9S0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.41□□□□□ -2.18
NANOGQ9H9S0 LINC02555-201ENST00000563933 1951 ntBASIC1.41□□□□□ -2.18
NANOGQ9H9S0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
NANOGQ9H9S0 RNU1-58P-201ENST00000362413 163 ntBASIC1.41□□□□□ -2.18
NANOGQ9H9S0 Y_RNA.99-201ENST00000363138 105 ntBASIC1.41□□□□□ -2.18
NANOGQ9H9S0 Y_RNA.259-201ENST00000364619 101 ntBASIC1.41□□□□□ -2.18
NANOGQ9H9S0 Y_RNA.415-201ENST00000384012 112 ntBASIC1.41□□□□□ -2.18
NANOGQ9H9S0 RNU6-281P-201ENST00000384212 103 ntBASIC1.41□□□□□ -2.18
NANOGQ9H9S0 RNU6-1297P-201ENST00000384415 104 ntBASIC1.41□□□□□ -2.18
NANOGQ9H9S0 RNU11-3P-201ENST00000391111 133 ntBASIC1.41□□□□□ -2.18
NANOGQ9H9S0 AL357139.1-201ENST00000407792 426 ntBASIC1.41□□□□□ -2.18
NANOGQ9H9S0 MIR1283-1-201ENST00000408494 87 ntBASIC1.41□□□□□ -2.18
NANOGQ9H9S0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.41□□□□□ -2.18
NANOGQ9H9S0 AC093019.1-201ENST00000443135 252 ntBASIC1.41□□□□□ -2.18
NANOGQ9H9S0 AC009237.7-201ENST00000447357 229 ntBASIC1.41□□□□□ -2.18
NANOGQ9H9S0 HSPE1P24-201ENST00000450782 238 ntBASIC1.41□□□□□ -2.18
NANOGQ9H9S0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.41□□□□□ -2.18
NANOGQ9H9S0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.41□□□□□ -2.18
NANOGQ9H9S0 RN7SKP210-201ENST00000459176 261 ntBASIC1.41□□□□□ -2.18
NANOGQ9H9S0 RNU7-175P-201ENST00000515915 61 ntBASIC1.41□□□□□ -2.18
NANOGQ9H9S0 RNU6-970P-201ENST00000516312 107 ntBASIC1.41□□□□□ -2.18
NANOGQ9H9S0 Y_RNA.675-201ENST00000516389 149 ntBASIC1.41□□□□□ -2.18
NANOGQ9H9S0 SNORA25.14-201ENST00000516481 132 ntBASIC1.41□□□□□ -2.18
NANOGQ9H9S0 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.41□□□□□ -2.18
NANOGQ9H9S0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.41□□□□□ -2.18
NANOGQ9H9S0 MIR5695-201ENST00000579717 85 ntBASIC1.41□□□□□ -2.18
NANOGQ9H9S0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
NANOGQ9H9S0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.4□□□□□ -2.19
NANOGQ9H9S0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
NANOGQ9H9S0 RNU4-79P-201ENST00000362764 141 ntBASIC1.4□□□□□ -2.19
NANOGQ9H9S0 RNU6-867P-201ENST00000364956 107 ntBASIC1.4□□□□□ -2.19
NANOGQ9H9S0 Y_RNA.315-201ENST00000365117 102 ntBASIC1.4□□□□□ -2.19
NANOGQ9H9S0 Y_RNA.394-201ENST00000383942 103 ntBASIC1.4□□□□□ -2.19
NANOGQ9H9S0 Y_RNA.419-201ENST00000384041 102 ntBASIC1.4□□□□□ -2.19
NANOGQ9H9S0 RNU6-318P-201ENST00000384283 103 ntBASIC1.4□□□□□ -2.19
NANOGQ9H9S0 Y_RNA.496-201ENST00000384444 101 ntBASIC1.4□□□□□ -2.19
NANOGQ9H9S0 Y_RNA.509-201ENST00000384506 99 ntBASIC1.4□□□□□ -2.19
NANOGQ9H9S0 RNA5SP501-201ENST00000410990 112 ntBASIC1.4□□□□□ -2.19
NANOGQ9H9S0 RNU6-1001P-201ENST00000411265 100 ntBASIC1.4□□□□□ -2.19
NANOGQ9H9S0 AC060773.1-201ENST00000421698 310 ntBASIC1.4□□□□□ -2.19
NANOGQ9H9S0 EIF1P2-201ENST00000428233 350 ntBASIC1.4□□□□□ -2.19
NANOGQ9H9S0 AC099677.2-201ENST00000436385 175 ntBASIC1.4□□□□□ -2.19
NANOGQ9H9S0 AL357134.1-201ENST00000445848 426 ntBASIC1.4□□□□□ -2.19
NANOGQ9H9S0 ELOCP24-201ENST00000456370 334 ntBASIC1.4□□□□□ -2.19
NANOGQ9H9S0 MIR2053-201ENST00000459295 91 ntBASIC1.4□□□□□ -2.19
NANOGQ9H9S0 SNORD19B-201ENST00000459623 84 ntBASIC1.4□□□□□ -2.19
NANOGQ9H9S0 RPL17P19-201ENST00000489069 552 ntBASIC1.4□□□□□ -2.19
NANOGQ9H9S0 MTND3P22-201ENST00000510932 243 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms