Protein–RNA interactions for Protein: Q9H9J4

USP42, Ubiquitin carboxyl-terminal hydrolase 42, humanhuman

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP42Q9H9J4 RNU6-227P-201ENST00000362865 103 ntBASIC0.65□□□□□ -2.3
USP42Q9H9J4 Y_RNA.68-201ENST00000362881 102 ntBASIC0.65□□□□□ -2.3
USP42Q9H9J4 Y_RNA.201-201ENST00000364052 96 ntBASIC0.65□□□□□ -2.3
USP42Q9H9J4 RNU6-1305P-201ENST00000364353 104 ntBASIC0.65□□□□□ -2.3
USP42Q9H9J4 RNU4-12P-201ENST00000365233 139 ntBASIC0.65□□□□□ -2.3
USP42Q9H9J4 SNORA67.2-201ENST00000384300 149 ntBASIC0.65□□□□□ -2.3
USP42Q9H9J4 RN7SKP200-201ENST00000410564 320 ntBASIC0.65□□□□□ -2.3
USP42Q9H9J4 RNU6-57P-201ENST00000411348 103 ntBASIC0.65□□□□□ -2.3
USP42Q9H9J4 AC006461.1-201ENST00000412637 326 ntBASIC0.65□□□□□ -2.3
USP42Q9H9J4 AL365203.2-201ENST00000423444 196 ntBASIC0.65□□□□□ -2.3
USP42Q9H9J4 MTND3P9-201ENST00000429526 346 ntBASIC0.65□□□□□ -2.3
USP42Q9H9J4 NFU1P2-201ENST00000448700 469 ntBASIC0.65□□□□□ -2.3
USP42Q9H9J4 RNU7-138P-201ENST00000459479 64 ntBASIC0.65□□□□□ -2.3
USP42Q9H9J4 AC105758.1-201ENST00000506038 399 ntBASIC0.65□□□□□ -2.3
USP42Q9H9J4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.65□□□□□ -2.3
USP42Q9H9J4 AC025465.4-201ENST00000513422 638 ntBASIC0.65□□□□□ -2.3
USP42Q9H9J4 AL121579.1-201ENST00000555129 305 ntBASIC0.65□□□□□ -2.3
USP42Q9H9J4 MIR5695-201ENST00000579717 85 ntBASIC0.65□□□□□ -2.3
USP42Q9H9J4 AC068790.2-201ENST00000602601 557 ntBASIC0.65□□□□□ -2.3
USP42Q9H9J4 AL390123.1-201ENST00000603216 237 ntBASIC0.65□□□□□ -2.3
USP42Q9H9J4 AC022217.4-201ENST00000604389 163 ntBASIC0.65□□□□□ -2.3
USP42Q9H9J4 RMST_3.1-201ENST00000611651 109 ntBASIC0.65□□□□□ -2.3
USP42Q9H9J4 TCL6_2.1-201ENST00000615162 119 ntBASIC0.65□□□□□ -2.3
USP42Q9H9J4 AC068792.1-201ENST00000621354 417 ntBASIC0.65□□□□□ -2.3
USP42Q9H9J4 RNU6-222P-201ENST00000362438 107 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 RNU6-1120P-201ENST00000362988 108 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 MIR487A-201ENST00000385009 80 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 MIR605-201ENST00000385078 83 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 RPS26P42-201ENST00000413485 326 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 MTATP6P18-201ENST00000417994 673 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 MTND4P32-201ENST00000437189 1237 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.64□□□□□ -2.31
USP42Q9H9J4 AC009237.7-201ENST00000447357 229 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 AC074290.1-201ENST00000448883 135 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 AC073415.1-201ENST00000449240 153 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.64□□□□□ -2.31
USP42Q9H9J4 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.64□□□□□ -2.31
USP42Q9H9J4 RNU6-322P-201ENST00000516010 103 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 AC016256.1-201ENST00000547971 354 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 MIR3941-201ENST00000582572 103 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 MIR4424-201ENST00000585257 86 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 AC146944.4-201ENST00000602697 718 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 AP000907.4-201ENST00000604143 237 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 AC008536.2-201ENST00000607284 349 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 AL390237.1-201ENST00000404226 1415 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.64□□□□□ -2.31
USP42Q9H9J4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
USP42Q9H9J4 Y_RNA.178-201ENST00000363832 102 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 RNU6-517P-201ENST00000384362 110 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 RNU6-1106P-201ENST00000390845 107 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 RNA5SP219-201ENST00000390940 113 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 MIR450B-201ENST00000401182 78 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.64□□□□□ -2.31
USP42Q9H9J4 RPS26P5-201ENST00000418544 335 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.64□□□□□ -2.31
USP42Q9H9J4 AC005002.2-201ENST00000438228 269 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.64□□□□□ -2.31
USP42Q9H9J4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.64□□□□□ -2.31
USP42Q9H9J4 RPS20P10-201ENST00000451209 253 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 AF186996.7-201ENST00000492781 209 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 SNORA14.1-201ENST00000516113 141 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 RN7SKP287-201ENST00000516546 266 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 AC024995.1-201ENST00000523014 93 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.64□□□□□ -2.31
USP42Q9H9J4 AL513534.2-201ENST00000603836 250 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 GHRLOS.1-201ENST00000610995 70 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 AC243829.6-201ENST00000612652 106 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 MIR5087-201ENST00000635826 76 ntBASIC0.64□□□□□ -2.31
USP42Q9H9J4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.63□□□□□ -2.31
USP42Q9H9J4 RNA5SP361-201ENST00000362686 118 ntBASIC0.63□□□□□ -2.31
USP42Q9H9J4 RNU6-1317P-201ENST00000364582 104 ntBASIC0.63□□□□□ -2.31
USP42Q9H9J4 SNORA72.3-201ENST00000365074 132 ntBASIC0.63□□□□□ -2.31
USP42Q9H9J4 VTRNA1-3-201ENST00000365645 89 ntBASIC0.63□□□□□ -2.31
USP42Q9H9J4 RNU6-1286P-201ENST00000383871 107 ntBASIC0.63□□□□□ -2.31
USP42Q9H9J4 MIR200A-201ENST00000384875 90 ntBASIC0.63□□□□□ -2.31
USP42Q9H9J4 MIR586-201ENST00000385035 97 ntBASIC0.63□□□□□ -2.31
USP42Q9H9J4 RNA5SP494-201ENST00000410653 129 ntBASIC0.63□□□□□ -2.31
USP42Q9H9J4 RNA5SP504-201ENST00000410676 117 ntBASIC0.63□□□□□ -2.31
USP42Q9H9J4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.63□□□□□ -2.31
USP42Q9H9J4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.63□□□□□ -2.31
USP42Q9H9J4 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.63□□□□□ -2.31
USP42Q9H9J4 AC245047.7-201ENST00000440265 293 ntBASIC0.63□□□□□ -2.31
USP42Q9H9J4 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.63□□□□□ -2.31
USP42Q9H9J4 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.63□□□□□ -2.31
USP42Q9H9J4 RNU7-57P-201ENST00000459540 60 ntBASIC0.63□□□□□ -2.31
USP42Q9H9J4 RNU6-1037P-201ENST00000459571 107 ntBASIC0.63□□□□□ -2.31
USP42Q9H9J4 AC007215.1-201ENST00000464893 276 ntBASIC0.63□□□□□ -2.31
USP42Q9H9J4 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.63□□□□□ -2.31
USP42Q9H9J4 TRBVA-201ENST00000498804 316 ntBASIC0.63□□□□□ -2.31
USP42Q9H9J4 RNU6-430P-201ENST00000517078 107 ntBASIC0.63□□□□□ -2.31
USP42Q9H9J4 AC104576.1-201ENST00000524225 88 ntBASIC0.63□□□□□ -2.31
USP42Q9H9J4 AL590705.4-201ENST00000532209 134 ntBASIC0.63□□□□□ -2.31
USP42Q9H9J4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.63□□□□□ -2.31
USP42Q9H9J4 MTND1P24-201ENST00000552175 861 ntBASIC0.63□□□□□ -2.31
USP42Q9H9J4 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.63□□□□□ -2.31
USP42Q9H9J4 AC026470.2-201ENST00000561492 181 ntBASIC0.63□□□□□ -2.31
USP42Q9H9J4 AL391840.1-201ENST00000571144 367 ntBASIC0.63□□□□□ -2.31
USP42Q9H9J4 AC022432.1-201ENST00000595739 310 ntBASIC0.63□□□□□ -2.31
USP42Q9H9J4 Z94722.1-201ENST00000604328 474 ntBASIC0.63□□□□□ -2.31
USP42Q9H9J4 AC093424.1-201ENST00000604999 338 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms