Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.29□□□□□ -2.36
CHMP4BQ9H444 MIR98-201ENST00000606724 119 ntBASIC0.29□□□□□ -2.36
CHMP4BQ9H444 AC006566.1-201ENST00000608943 513 ntBASIC0.29□□□□□ -2.36
CHMP4BQ9H444 AC022709.1-201ENST00000615967 87 ntBASIC0.29□□□□□ -2.36
CHMP4BQ9H444 Y_RNA.265-201ENST00000364677 108 ntBASIC0.28□□□□□ -2.36
CHMP4BQ9H444 SNORA36.2-201ENST00000384004 127 ntBASIC0.28□□□□□ -2.36
CHMP4BQ9H444 RNA5SP222-201ENST00000411039 105 ntBASIC0.28□□□□□ -2.36
CHMP4BQ9H444 MTCO2P34-201ENST00000421994 607 ntBASIC0.28□□□□□ -2.36
CHMP4BQ9H444 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.28□□□□□ -2.36
CHMP4BQ9H444 RNU6-1132P-201ENST00000459214 107 ntBASIC0.28□□□□□ -2.36
CHMP4BQ9H444 GMFBP1-201ENST00000467831 427 ntBASIC0.28□□□□□ -2.36
CHMP4BQ9H444 OR9P1P-201ENST00000496431 281 ntBASIC0.28□□□□□ -2.36
CHMP4BQ9H444 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.28□□□□□ -2.36
CHMP4BQ9H444 AC106038.2-201ENST00000520706 568 ntBASIC0.28□□□□□ -2.36
CHMP4BQ9H444 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.28□□□□□ -2.36
CHMP4BQ9H444 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.28□□□□□ -2.36
CHMP4BQ9H444 FRG2DP-202ENST00000566967 323 ntBASIC0.28□□□□□ -2.36
CHMP4BQ9H444 MIR3682-201ENST00000581338 84 ntBASIC0.28□□□□□ -2.36
CHMP4BQ9H444 SNORA4-201ENST00000584302 138 ntBASIC0.28□□□□□ -2.36
CHMP4BQ9H444 MIR3192-201ENST00000584920 77 ntBASIC0.28□□□□□ -2.36
CHMP4BQ9H444 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.28□□□□□ -2.36
CHMP4BQ9H444 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.28□□□□□ -2.36
CHMP4BQ9H444 ZNF204P-201ENST00000416749 2397 ntBASIC0.28□□□□□ -2.36
CHMP4BQ9H444 MTND4P4-201ENST00000439033 1366 ntBASIC0.28□□□□□ -2.36
CHMP4BQ9H444 AL663109.1-201ENST00000411498 844 ntBASIC0.27□□□□□ -2.37
CHMP4BQ9H444 RPL31P35-201ENST00000431058 377 ntBASIC0.27□□□□□ -2.37
CHMP4BQ9H444 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.27□□□□□ -2.37
CHMP4BQ9H444 USP9YP29-201ENST00000445112 563 ntBASIC0.27□□□□□ -2.37
CHMP4BQ9H444 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.27□□□□□ -2.37
CHMP4BQ9H444 RNU6-1037P-201ENST00000459571 107 ntBASIC0.27□□□□□ -2.37
CHMP4BQ9H444 AF186996.7-201ENST00000492781 209 ntBASIC0.27□□□□□ -2.37
CHMP4BQ9H444 RNU6-1110P-201ENST00000516462 101 ntBASIC0.27□□□□□ -2.37
CHMP4BQ9H444 MIR548AB-201ENST00000584917 84 ntBASIC0.27□□□□□ -2.37
CHMP4BQ9H444 U2.17-201ENST00000611454 95 ntBASIC0.27□□□□□ -2.37
CHMP4BQ9H444 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.27□□□□□ -2.37
CHMP4BQ9H444 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.27□□□□□ -2.37
CHMP4BQ9H444 MTND5P16-201ENST00000460269 1703 ntBASIC0.27□□□□□ -2.37
CHMP4BQ9H444 RNA5SP264-201ENST00000363115 107 ntBASIC0.26□□□□□ -2.37
CHMP4BQ9H444 Y_RNA.123-201ENST00000363338 102 ntBASIC0.26□□□□□ -2.37
CHMP4BQ9H444 Y_RNA.238-201ENST00000364441 102 ntBASIC0.26□□□□□ -2.37
CHMP4BQ9H444 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
CHMP4BQ9H444 RNY1P8-201ENST00000383970 114 ntBASIC0.26□□□□□ -2.37
CHMP4BQ9H444 MIR518E-201ENST00000385252 88 ntBASIC0.26□□□□□ -2.37
CHMP4BQ9H444 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.26□□□□□ -2.37
CHMP4BQ9H444 SSR1P2-201ENST00000415208 787 ntBASIC0.26□□□□□ -2.37
CHMP4BQ9H444 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.26□□□□□ -2.37
CHMP4BQ9H444 AC004854.1-201ENST00000440356 349 ntBASIC0.26□□□□□ -2.37
CHMP4BQ9H444 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.26□□□□□ -2.37
CHMP4BQ9H444 RNU7-138P-201ENST00000459479 64 ntBASIC0.26□□□□□ -2.37
CHMP4BQ9H444 MTND4LP26-201ENST00000518144 282 ntBASIC0.26□□□□□ -2.37
CHMP4BQ9H444 AL117336.2-201ENST00000602435 335 ntBASIC0.26□□□□□ -2.37
CHMP4BQ9H444 AL022161.1-201ENST00000604390 213 ntBASIC0.26□□□□□ -2.37
CHMP4BQ9H444 SNORD11B-201ENST00000607707 90 ntBASIC0.26□□□□□ -2.37
CHMP4BQ9H444 RMST_2.1-201ENST00000617263 136 ntBASIC0.26□□□□□ -2.37
CHMP4BQ9H444 AC100810.6-201ENST00000638068 285 ntBASIC0.26□□□□□ -2.37
CHMP4BQ9H444 RNU6-348P-201ENST00000384386 107 ntBASIC0.25□□□□□ -2.37
CHMP4BQ9H444 RNU6-1067P-201ENST00000384752 107 ntBASIC0.25□□□□□ -2.37
CHMP4BQ9H444 MIR487A-201ENST00000385009 80 ntBASIC0.25□□□□□ -2.37
CHMP4BQ9H444 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.25□□□□□ -2.37
CHMP4BQ9H444 AC009961.2-201ENST00000435771 251 ntBASIC0.25□□□□□ -2.37
CHMP4BQ9H444 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.25□□□□□ -2.37
CHMP4BQ9H444 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
CHMP4BQ9H444 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.25□□□□□ -2.37
CHMP4BQ9H444 AC004223.2-201ENST00000590309 544 ntBASIC0.25□□□□□ -2.37
CHMP4BQ9H444 AC007014.2-201ENST00000615581 479 ntBASIC0.25□□□□□ -2.37
CHMP4BQ9H444 AC137590.2-201ENST00000619709 240 ntBASIC0.25□□□□□ -2.37
CHMP4BQ9H444 AC010608.3-201ENST00000625048 527 ntBASIC0.25□□□□□ -2.37
CHMP4BQ9H444 MIRLET7D-201ENST00000362263 87 ntBASIC0.24□□□□□ -2.37
CHMP4BQ9H444 RNU6-1266P-201ENST00000362794 105 ntBASIC0.24□□□□□ -2.37
CHMP4BQ9H444 RNU6-1327P-201ENST00000365302 105 ntBASIC0.24□□□□□ -2.37
CHMP4BQ9H444 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.24□□□□□ -2.37
CHMP4BQ9H444 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.24□□□□□ -2.37
CHMP4BQ9H444 SEPT14P17-201ENST00000617978 177 ntBASIC0.24□□□□□ -2.37
CHMP4BQ9H444 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.24□□□□□ -2.37
CHMP4BQ9H444 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.24□□□□□ -2.37
CHMP4BQ9H444 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
CHMP4BQ9H444 MIR103A2-201ENST00000362154 78 ntBASIC0.23□□□□□ -2.37
CHMP4BQ9H444 MIR216A-201ENST00000385063 110 ntBASIC0.23□□□□□ -2.37
CHMP4BQ9H444 MIR1185-2-201ENST00000408687 86 ntBASIC0.23□□□□□ -2.37
CHMP4BQ9H444 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.23□□□□□ -2.37
CHMP4BQ9H444 MTCO1P19-201ENST00000443487 500 ntBASIC0.23□□□□□ -2.37
CHMP4BQ9H444 RPS20P10-201ENST00000451209 253 ntBASIC0.23□□□□□ -2.37
CHMP4BQ9H444 RNU6-58P-201ENST00000517143 103 ntBASIC0.23□□□□□ -2.37
CHMP4BQ9H444 AP003461.1-201ENST00000528866 78 ntBASIC0.23□□□□□ -2.37
CHMP4BQ9H444 MIR5583-1-201ENST00000580941 59 ntBASIC0.23□□□□□ -2.37
CHMP4BQ9H444 FGF7P1-201ENST00000582820 288 ntBASIC0.23□□□□□ -2.37
CHMP4BQ9H444 MIR4438-201ENST00000585271 93 ntBASIC0.23□□□□□ -2.37
CHMP4BQ9H444 AC122133.1-201ENST00000613964 233 ntBASIC0.23□□□□□ -2.37
CHMP4BQ9H444 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
CHMP4BQ9H444 MIR6079-201ENST00000635807 62 ntBASIC0.23□□□□□ -2.37
CHMP4BQ9H444 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
CHMP4BQ9H444 RNU2-29P-201ENST00000410423 189 ntBASIC0.22□□□□□ -2.37
CHMP4BQ9H444 MTCYBP10-201ENST00000424905 650 ntBASIC0.22□□□□□ -2.37
CHMP4BQ9H444 AC067940.1-201ENST00000458411 300 ntBASIC0.22□□□□□ -2.37
CHMP4BQ9H444 U8.21-201ENST00000459536 136 ntBASIC0.22□□□□□ -2.37
CHMP4BQ9H444 MTND1P5-201ENST00000517906 940 ntBASIC0.22□□□□□ -2.37
CHMP4BQ9H444 AL137161.1-201ENST00000532231 390 ntBASIC0.22□□□□□ -2.37
CHMP4BQ9H444 RNU6-94P-201ENST00000607728 107 ntBASIC0.22□□□□□ -2.37
CHMP4BQ9H444 AC005592.1-201ENST00000566527 1640 ntBASIC0.22□□□□□ -2.37
CHMP4BQ9H444 RNU6-349P-201ENST00000362402 107 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms