Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 AC010409.1-201ENST00000487382 476 ntBASIC1.77□□□□□ -2.13
SNX25Q9H3E2 RNU6-1041P-201ENST00000516254 102 ntBASIC1.77□□□□□ -2.13
SNX25Q9H3E2 SUMO2P18-201ENST00000518873 252 ntBASIC1.77□□□□□ -2.13
SNX25Q9H3E2 AC100812.1-201ENST00000607622 580 ntBASIC1.77□□□□□ -2.13
SNX25Q9H3E2 SNORD11B-201ENST00000607707 90 ntBASIC1.77□□□□□ -2.13
SNX25Q9H3E2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.77□□□□□ -2.13
SNX25Q9H3E2 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.77□□□□□ -2.13
SNX25Q9H3E2 AC006026.1-201ENST00000444025 1803 ntBASIC1.76□□□□□ -2.13
SNX25Q9H3E2 RNU6-222P-201ENST00000362438 107 ntBASIC1.76□□□□□ -2.13
SNX25Q9H3E2 RNU6-862P-201ENST00000362804 105 ntBASIC1.76□□□□□ -2.13
SNX25Q9H3E2 RNU6-727P-201ENST00000363592 107 ntBASIC1.76□□□□□ -2.13
SNX25Q9H3E2 RNU6-281P-201ENST00000384212 103 ntBASIC1.76□□□□□ -2.13
SNX25Q9H3E2 MIR548B-201ENST00000385247 97 ntBASIC1.76□□□□□ -2.13
SNX25Q9H3E2 RNU1-139P-201ENST00000391307 165 ntBASIC1.76□□□□□ -2.13
SNX25Q9H3E2 MIR190B-201ENST00000401119 79 ntBASIC1.76□□□□□ -2.13
SNX25Q9H3E2 AL033519.2-201ENST00000403958 392 ntBASIC1.76□□□□□ -2.13
SNX25Q9H3E2 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.76□□□□□ -2.13
SNX25Q9H3E2 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.76□□□□□ -2.13
SNX25Q9H3E2 AC011406.1-201ENST00000512440 370 ntBASIC1.76□□□□□ -2.13
SNX25Q9H3E2 SCARNA16.2-201ENST00000516520 172 ntBASIC1.76□□□□□ -2.13
SNX25Q9H3E2 Y_RNA.706-201ENST00000516933 99 ntBASIC1.76□□□□□ -2.13
SNX25Q9H3E2 AL121579.1-201ENST00000555129 305 ntBASIC1.76□□□□□ -2.13
SNX25Q9H3E2 MIR5094-201ENST00000578766 85 ntBASIC1.76□□□□□ -2.13
SNX25Q9H3E2 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.76□□□□□ -2.13
SNX25Q9H3E2 PISRT1.1-201ENST00000616930 107 ntBASIC1.76□□□□□ -2.13
SNX25Q9H3E2 AL078596.1-201ENST00000624856 447 ntBASIC1.76□□□□□ -2.13
SNX25Q9H3E2 AC068205.3-201ENST00000636385 468 ntBASIC1.76□□□□□ -2.13
SNX25Q9H3E2 AL669831.3-213ENST00000636676 183 ntBASIC1.76□□□□□ -2.13
SNX25Q9H3E2 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
SNX25Q9H3E2 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SNX25Q9H3E2 RNU6-112P-201ENST00000363599 104 ntBASIC1.75□□□□□ -2.13
SNX25Q9H3E2 RNU6-280P-201ENST00000364145 104 ntBASIC1.75□□□□□ -2.13
SNX25Q9H3E2 SNORD87-201ENST00000364849 89 ntBASIC1.75□□□□□ -2.13
SNX25Q9H3E2 SNORD48-201ENST00000364953 64 ntBASIC1.75□□□□□ -2.13
SNX25Q9H3E2 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.75□□□□□ -2.13
SNX25Q9H3E2 RNU6-296P-201ENST00000384608 107 ntBASIC1.75□□□□□ -2.13
SNX25Q9H3E2 Y_RNA.635-201ENST00000459041 101 ntBASIC1.75□□□□□ -2.13
SNX25Q9H3E2 AC114982.1-201ENST00000469402 321 ntBASIC1.75□□□□□ -2.13
SNX25Q9H3E2 RNU6-1114P-201ENST00000516022 107 ntBASIC1.75□□□□□ -2.13
SNX25Q9H3E2 HSBP1P1-201ENST00000555205 166 ntBASIC1.75□□□□□ -2.13
SNX25Q9H3E2 MIR4255-201ENST00000579351 72 ntBASIC1.75□□□□□ -2.13
SNX25Q9H3E2 MIR4713-201ENST00000582691 75 ntBASIC1.75□□□□□ -2.13
SNX25Q9H3E2 MIR4769-201ENST00000584126 77 ntBASIC1.75□□□□□ -2.13
SNX25Q9H3E2 MZT1P2-201ENST00000604387 248 ntBASIC1.75□□□□□ -2.13
SNX25Q9H3E2 AC103810.8-201ENST00000607347 118 ntBASIC1.75□□□□□ -2.13
SNX25Q9H3E2 AL353149.1-201ENST00000610667 244 ntBASIC1.75□□□□□ -2.13
SNX25Q9H3E2 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.75□□□□□ -2.13
SNX25Q9H3E2 MTND5P16-201ENST00000460269 1703 ntBASIC1.74□□□□□ -2.13
SNX25Q9H3E2 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SNX25Q9H3E2 WWP1P1-201ENST00000466609 2769 ntBASIC1.74□□□□□ -2.13
SNX25Q9H3E2 SNORA72.1-201ENST00000363485 129 ntBASIC1.74□□□□□ -2.13
SNX25Q9H3E2 RNU6-1188P-201ENST00000363795 107 ntBASIC1.74□□□□□ -2.13
SNX25Q9H3E2 Y_RNA.415-201ENST00000384012 112 ntBASIC1.74□□□□□ -2.13
SNX25Q9H3E2 RNU6-793P-201ENST00000384233 104 ntBASIC1.74□□□□□ -2.13
SNX25Q9H3E2 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SNX25Q9H3E2 RNU6-482P-201ENST00000391068 107 ntBASIC1.74□□□□□ -2.13
SNX25Q9H3E2 AC016909.1-201ENST00000415916 166 ntBASIC1.74□□□□□ -2.13
SNX25Q9H3E2 NCOR1P3-201ENST00000420479 303 ntBASIC1.74□□□□□ -2.13
SNX25Q9H3E2 EIF1P2-201ENST00000428233 350 ntBASIC1.74□□□□□ -2.13
SNX25Q9H3E2 AC245047.4-201ENST00000433189 144 ntBASIC1.74□□□□□ -2.13
SNX25Q9H3E2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SNX25Q9H3E2 AC093303.1-201ENST00000514549 295 ntBASIC1.74□□□□□ -2.13
SNX25Q9H3E2 APOOP3-201ENST00000536787 586 ntBASIC1.74□□□□□ -2.13
SNX25Q9H3E2 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.74□□□□□ -2.13
SNX25Q9H3E2 MIR5695-201ENST00000579717 85 ntBASIC1.74□□□□□ -2.13
SNX25Q9H3E2 UBE2V2P2-201ENST00000587677 504 ntBASIC1.74□□□□□ -2.13
SNX25Q9H3E2 RBM11P1-201ENST00000604951 799 ntBASIC1.74□□□□□ -2.13
SNX25Q9H3E2 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.74□□□□□ -2.13
SNX25Q9H3E2 AC126177.8-201ENST00000618339 1015 ntBASIC1.74□□□□□ -2.13
SNX25Q9H3E2 snoZ196.1-201ENST00000625269 89 ntBASIC1.74□□□□□ -2.13
SNX25Q9H3E2 MIR338-201ENST00000636369 67 ntBASIC1.74□□□□□ -2.13
SNX25Q9H3E2 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SNX25Q9H3E2 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
SNX25Q9H3E2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SNX25Q9H3E2 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SNX25Q9H3E2 Y_RNA.142-201ENST00000363491 102 ntBASIC1.73□□□□□ -2.13
SNX25Q9H3E2 Y_RNA.364-201ENST00000365532 101 ntBASIC1.73□□□□□ -2.13
SNX25Q9H3E2 Y_RNA.646-201ENST00000410980 101 ntBASIC1.73□□□□□ -2.13
SNX25Q9H3E2 RNU6-370P-201ENST00000411008 104 ntBASIC1.73□□□□□ -2.13
SNX25Q9H3E2 RNU6-57P-201ENST00000411348 103 ntBASIC1.73□□□□□ -2.13
SNX25Q9H3E2 RNU6-1304P-201ENST00000411374 106 ntBASIC1.73□□□□□ -2.13
SNX25Q9H3E2 MTCYBP10-201ENST00000424905 650 ntBASIC1.73□□□□□ -2.13
SNX25Q9H3E2 NDUFB4P10-201ENST00000452541 359 ntBASIC1.73□□□□□ -2.13
SNX25Q9H3E2 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.73□□□□□ -2.13
SNX25Q9H3E2 RNU6-221P-201ENST00000459541 99 ntBASIC1.73□□□□□ -2.13
SNX25Q9H3E2 RNU6-120P-201ENST00000516077 103 ntBASIC1.73□□□□□ -2.13
SNX25Q9H3E2 AC025647.1-201ENST00000517879 253 ntBASIC1.73□□□□□ -2.13
SNX25Q9H3E2 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.73□□□□□ -2.13
SNX25Q9H3E2 MIR4801-201ENST00000582704 82 ntBASIC1.73□□□□□ -2.13
SNX25Q9H3E2 AC005730.3-201ENST00000583067 366 ntBASIC1.73□□□□□ -2.13
SNX25Q9H3E2 AC005899.2-201ENST00000584353 90 ntBASIC1.73□□□□□ -2.13
SNX25Q9H3E2 AC006001.4-201ENST00000622243 395 ntBASIC1.73□□□□□ -2.13
SNX25Q9H3E2 ZNF72P-201ENST00000425869 1908 ntBASIC1.72□□□□□ -2.13
SNX25Q9H3E2 U3.8-201ENST00000363675 217 ntBASIC1.72□□□□□ -2.13
SNX25Q9H3E2 Y_RNA.179-201ENST00000363844 90 ntBASIC1.72□□□□□ -2.13
SNX25Q9H3E2 RNU6-310P-201ENST00000384655 107 ntBASIC1.72□□□□□ -2.13
SNX25Q9H3E2 RNU6-700P-201ENST00000391043 107 ntBASIC1.72□□□□□ -2.13
SNX25Q9H3E2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SNX25Q9H3E2 RN7SKP101-201ENST00000411376 320 ntBASIC1.72□□□□□ -2.13
SNX25Q9H3E2 USP9YP16-201ENST00000430287 407 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 209.8 ms