Protein–RNA interactions for Protein: Q9H2H0

CXXC4, CXXC-type zinc finger protein 4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4Q9H2H0 Y_RNA.224-201ENST00000364308 111 ntBASIC1.6□□□□□ -2.15
CXXC4Q9H2H0 RNU6-1305P-201ENST00000364353 104 ntBASIC1.6□□□□□ -2.15
CXXC4Q9H2H0 RNU1-139P-201ENST00000391307 165 ntBASIC1.6□□□□□ -2.15
CXXC4Q9H2H0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CXXC4Q9H2H0 HMGN2P19-201ENST00000425149 265 ntBASIC1.6□□□□□ -2.15
CXXC4Q9H2H0 RNA5SP57-201ENST00000459463 123 ntBASIC1.6□□□□□ -2.15
CXXC4Q9H2H0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.6□□□□□ -2.15
CXXC4Q9H2H0 RNA5SP364-201ENST00000516938 78 ntBASIC1.6□□□□□ -2.15
CXXC4Q9H2H0 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.6□□□□□ -2.15
CXXC4Q9H2H0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.6□□□□□ -2.15
CXXC4Q9H2H0 MIR6504-201ENST00000613520 61 ntBASIC1.6□□□□□ -2.15
CXXC4Q9H2H0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
CXXC4Q9H2H0 U3.8-201ENST00000363675 217 ntBASIC1.59□□□□□ -2.15
CXXC4Q9H2H0 RNU6-873P-201ENST00000363833 107 ntBASIC1.59□□□□□ -2.15
CXXC4Q9H2H0 RNU6-392P-201ENST00000364926 101 ntBASIC1.59□□□□□ -2.15
CXXC4Q9H2H0 SNORA51.11-201ENST00000384442 131 ntBASIC1.59□□□□□ -2.15
CXXC4Q9H2H0 MIR9-3-201ENST00000385084 90 ntBASIC1.59□□□□□ -2.15
CXXC4Q9H2H0 MIR549A-201ENST00000385268 96 ntBASIC1.59□□□□□ -2.15
CXXC4Q9H2H0 RNU6-700P-201ENST00000391043 107 ntBASIC1.59□□□□□ -2.15
CXXC4Q9H2H0 CST2P1-201ENST00000425770 87 ntBASIC1.59□□□□□ -2.15
CXXC4Q9H2H0 RNU7-57P-201ENST00000459540 60 ntBASIC1.59□□□□□ -2.15
CXXC4Q9H2H0 AC011406.1-201ENST00000512440 370 ntBASIC1.59□□□□□ -2.15
CXXC4Q9H2H0 RNU6-1114P-201ENST00000516022 107 ntBASIC1.59□□□□□ -2.15
CXXC4Q9H2H0 Y_RNA.670-201ENST00000516255 105 ntBASIC1.59□□□□□ -2.15
CXXC4Q9H2H0 RNU6-1146P-201ENST00000516282 102 ntBASIC1.59□□□□□ -2.15
CXXC4Q9H2H0 SNORA20.3-201ENST00000516880 132 ntBASIC1.59□□□□□ -2.15
CXXC4Q9H2H0 AC105029.1-201ENST00000520250 669 ntBASIC1.59□□□□□ -2.15
CXXC4Q9H2H0 CBX3P8-201ENST00000532412 525 ntBASIC1.59□□□□□ -2.15
CXXC4Q9H2H0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.59□□□□□ -2.15
CXXC4Q9H2H0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.59□□□□□ -2.15
CXXC4Q9H2H0 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.59□□□□□ -2.15
CXXC4Q9H2H0 AC069114.2-201ENST00000604699 304 ntBASIC1.59□□□□□ -2.15
CXXC4Q9H2H0 PISRT1.1-201ENST00000616930 107 ntBASIC1.59□□□□□ -2.15
CXXC4Q9H2H0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.59□□□□□ -2.15
CXXC4Q9H2H0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
CXXC4Q9H2H0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 Y_RNA.2-201ENST00000362330 96 ntBASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 SNORA16.1-201ENST00000364597 132 ntBASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 RNU6-793P-201ENST00000384233 104 ntBASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 MIR515-2-201ENST00000384883 83 ntBASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 MIR515-1-201ENST00000384884 83 ntBASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 MIR10B-201ENST00000385011 110 ntBASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 SUMO2P12-201ENST00000405924 140 ntBASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 AC138393.2-201ENST00000414742 246 ntBASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 PDCL2P1-201ENST00000419302 352 ntBASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 AC008134.1-201ENST00000420943 193 ntBASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 MTCYBP10-201ENST00000424905 650 ntBASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 AC069257.2-201ENST00000441819 155 ntBASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 Y_RNA.635-201ENST00000459041 101 ntBASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 AC093303.1-201ENST00000514549 295 ntBASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 CYCSP23-201ENST00000519781 313 ntBASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 MIR4303-201ENST00000581299 66 ntBASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 BX248123.2-201ENST00000606318 124 ntBASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 AC009229.3-201ENST00000608056 282 ntBASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 AL512598.1-201ENST00000610158 273 ntBASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 snoZ196.1-201ENST00000625269 89 ntBASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 CENPCP1-201ENST00000533085 2578 ntBASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.58□□□□□ -2.16
CXXC4Q9H2H0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 RNY1P16-201ENST00000363063 111 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 RNU6-112P-201ENST00000363599 104 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 Y_RNA.179-201ENST00000363844 90 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 Y_RNA.184-201ENST00000363884 108 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 RNU6-1019P-201ENST00000364424 107 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 RNY1P14-201ENST00000384426 108 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 MIR190B-201ENST00000401119 79 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 AL117342.1-201ENST00000404861 406 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 RNA5SP504-201ENST00000410676 117 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 EBAG9P1-201ENST00000418955 543 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 AC060773.1-201ENST00000421698 310 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 MTND3P23-201ENST00000431980 347 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 AC098614.3-201ENST00000438957 440 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 AC003989.2-201ENST00000440224 169 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 RNU7-95P-201ENST00000459222 64 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 RNU6-221P-201ENST00000459541 99 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 AP000870.1-201ENST00000472927 406 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 AC103851.1-201ENST00000506833 274 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 SNORA44.1-201ENST00000517031 108 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 AC090617.3-201ENST00000573670 475 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 AL355802.3-201ENST00000607571 545 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 AC005014.2-201ENST00000607795 599 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 AC025253.1-201ENST00000613623 543 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 TPTEP1-208ENST00000636884 213 ntBASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CXXC4Q9H2H0 SNORA72.2-201ENST00000365028 127 ntBASIC1.56□□□□□ -2.16
CXXC4Q9H2H0 SNORD81.2-201ENST00000365153 76 ntBASIC1.56□□□□□ -2.16
CXXC4Q9H2H0 RNU4-52P-201ENST00000384209 138 ntBASIC1.56□□□□□ -2.16
CXXC4Q9H2H0 RNU2-40P-201ENST00000410833 196 ntBASIC1.56□□□□□ -2.16
CXXC4Q9H2H0 RNA5SP489-201ENST00000410986 109 ntBASIC1.56□□□□□ -2.16
CXXC4Q9H2H0 AC007098.1-201ENST00000420122 367 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms