Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM55Q9BYV6 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM55Q9BYV6 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM55Q9BYV6 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM55Q9BYV6 MIR340-201ENST00000362125 95 ntBASIC3.12□□□□□ -1.91
TRIM55Q9BYV6 Y_RNA.329-201ENST00000365209 107 ntBASIC3.12□□□□□ -1.91
TRIM55Q9BYV6 Y_RNA.416-201ENST00000384014 113 ntBASIC3.12□□□□□ -1.91
TRIM55Q9BYV6 MT-TR-201ENST00000387439 65 ntBASIC3.12□□□□□ -1.91
TRIM55Q9BYV6 AL603910.2-201ENST00000407268 136 ntBASIC3.12□□□□□ -1.91
TRIM55Q9BYV6 RNA5SP492-201ENST00000411330 114 ntBASIC3.12□□□□□ -1.91
TRIM55Q9BYV6 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM55Q9BYV6 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM55Q9BYV6 AL357134.1-201ENST00000445848 426 ntBASIC3.12□□□□□ -1.91
TRIM55Q9BYV6 S100A11P2-201ENST00000467589 312 ntBASIC3.12□□□□□ -1.91
TRIM55Q9BYV6 RPL23AP94-201ENST00000512518 302 ntBASIC3.12□□□□□ -1.91
TRIM55Q9BYV6 AC005828.6-201ENST00000606610 232 ntBASIC3.12□□□□□ -1.91
TRIM55Q9BYV6 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM55Q9BYV6 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM55Q9BYV6 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM55Q9BYV6 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM55Q9BYV6 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM55Q9BYV6 RNU6-1266P-201ENST00000362794 105 ntBASIC3.11□□□□□ -1.91
TRIM55Q9BYV6 RNU4-80P-201ENST00000363200 141 ntBASIC3.11□□□□□ -1.91
TRIM55Q9BYV6 RNU6-514P-201ENST00000384208 107 ntBASIC3.11□□□□□ -1.91
TRIM55Q9BYV6 Y_RNA.478-201ENST00000384358 107 ntBASIC3.11□□□□□ -1.91
TRIM55Q9BYV6 RNA5SP274-201ENST00000410484 108 ntBASIC3.11□□□□□ -1.91
TRIM55Q9BYV6 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM55Q9BYV6 AP004217.1-201ENST00000480579 346 ntBASIC3.11□□□□□ -1.91
TRIM55Q9BYV6 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM55Q9BYV6 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM55Q9BYV6 RPPH1-2P-201ENST00000516688 293 ntBASIC3.11□□□□□ -1.91
TRIM55Q9BYV6 RNU6-388P-201ENST00000517012 105 ntBASIC3.11□□□□□ -1.91
TRIM55Q9BYV6 RNU6-389P-201ENST00000517048 105 ntBASIC3.11□□□□□ -1.91
TRIM55Q9BYV6 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.11□□□□□ -1.91
TRIM55Q9BYV6 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.11□□□□□ -1.91
TRIM55Q9BYV6 MIR3684-201ENST00000579779 74 ntBASIC3.11□□□□□ -1.91
TRIM55Q9BYV6 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM55Q9BYV6 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM55Q9BYV6 SNORD27-201ENST00000363981 72 ntBASIC3.1□□□□□ -1.91
TRIM55Q9BYV6 SNORA20.1-201ENST00000364790 130 ntBASIC3.1□□□□□ -1.91
TRIM55Q9BYV6 Y_RNA.361-201ENST00000365515 120 ntBASIC3.1□□□□□ -1.91
TRIM55Q9BYV6 U8.9-201ENST00000365667 134 ntBASIC3.1□□□□□ -1.91
TRIM55Q9BYV6 AC091959.1-201ENST00000495857 238 ntBASIC3.1□□□□□ -1.91
TRIM55Q9BYV6 AC025647.1-201ENST00000517879 253 ntBASIC3.1□□□□□ -1.91
TRIM55Q9BYV6 RPL21P9-201ENST00000556149 474 ntBASIC3.1□□□□□ -1.91
TRIM55Q9BYV6 LARP7P3-201ENST00000579888 337 ntBASIC3.1□□□□□ -1.91
TRIM55Q9BYV6 uc_338.25-201ENST00000613756 156 ntBASIC3.1□□□□□ -1.91
TRIM55Q9BYV6 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM55Q9BYV6 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TRIM55Q9BYV6 Y_RNA.20-201ENST00000362479 113 ntBASIC3.09□□□□□ -1.91
TRIM55Q9BYV6 Y_RNA.44-201ENST00000362676 108 ntBASIC3.09□□□□□ -1.91
TRIM55Q9BYV6 Y_RNA.54-201ENST00000362766 105 ntBASIC3.09□□□□□ -1.91
TRIM55Q9BYV6 Y_RNA.99-201ENST00000363138 105 ntBASIC3.09□□□□□ -1.91
TRIM55Q9BYV6 Y_RNA.500-201ENST00000384466 111 ntBASIC3.09□□□□□ -1.91
TRIM55Q9BYV6 AL355796.1-201ENST00000406706 323 ntBASIC3.09□□□□□ -1.91
TRIM55Q9BYV6 MIR1262-201ENST00000408276 93 ntBASIC3.09□□□□□ -1.91
TRIM55Q9BYV6 AC016909.1-201ENST00000415916 166 ntBASIC3.09□□□□□ -1.91
TRIM55Q9BYV6 COTL1P1-201ENST00000422309 375 ntBASIC3.09□□□□□ -1.91
TRIM55Q9BYV6 SUMO1P2-201ENST00000452524 304 ntBASIC3.09□□□□□ -1.91
TRIM55Q9BYV6 UBE2DNL-203ENST00000474922 222 ntBASIC3.09□□□□□ -1.91
TRIM55Q9BYV6 MIR4658-201ENST00000584344 65 ntBASIC3.09□□□□□ -1.91
TRIM55Q9BYV6 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.09□□□□□ -1.92
TRIM55Q9BYV6 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM55Q9BYV6 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.08□□□□□ -1.92
TRIM55Q9BYV6 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM55Q9BYV6 SNORA38-201ENST00000363946 132 ntBASIC3.08□□□□□ -1.92
TRIM55Q9BYV6 Y_RNA.510-201ENST00000384511 114 ntBASIC3.08□□□□□ -1.92
TRIM55Q9BYV6 AC008134.1-201ENST00000420943 193 ntBASIC3.08□□□□□ -1.92
TRIM55Q9BYV6 RN7SL499P-201ENST00000481141 276 ntBASIC3.08□□□□□ -1.92
TRIM55Q9BYV6 RN7SL633P-201ENST00000488974 297 ntBASIC3.08□□□□□ -1.92
TRIM55Q9BYV6 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM55Q9BYV6 RNU6-856P-201ENST00000516959 98 ntBASIC3.08□□□□□ -1.92
TRIM55Q9BYV6 CYCSP26-201ENST00000534107 320 ntBASIC3.08□□□□□ -1.92
TRIM55Q9BYV6 AC005357.1-201ENST00000588399 301 ntBASIC3.08□□□□□ -1.92
TRIM55Q9BYV6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
TRIM55Q9BYV6 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM55Q9BYV6 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
TRIM55Q9BYV6 MIR422A-201ENST00000362286 90 ntBASIC3.07□□□□□ -1.92
TRIM55Q9BYV6 Y_RNA.277-201ENST00000364754 102 ntBASIC3.07□□□□□ -1.92
TRIM55Q9BYV6 SNORA20B-201ENST00000384220 132 ntBASIC3.07□□□□□ -1.92
TRIM55Q9BYV6 RNU1-148P-201ENST00000384472 162 ntBASIC3.07□□□□□ -1.92
TRIM55Q9BYV6 Y_RNA.539-201ENST00000384635 107 ntBASIC3.07□□□□□ -1.92
TRIM55Q9BYV6 RNU4-47P-201ENST00000410876 114 ntBASIC3.07□□□□□ -1.92
TRIM55Q9BYV6 EDDM3CP-201ENST00000415977 425 ntBASIC3.07□□□□□ -1.92
TRIM55Q9BYV6 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM55Q9BYV6 AC025750.2-201ENST00000442609 450 ntBASIC3.07□□□□□ -1.92
TRIM55Q9BYV6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM55Q9BYV6 SNORD65B-201ENST00000459126 73 ntBASIC3.07□□□□□ -1.92
TRIM55Q9BYV6 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.07□□□□□ -1.92
TRIM55Q9BYV6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.07□□□□□ -1.92
TRIM55Q9BYV6 RNU6-191P-201ENST00000516295 94 ntBASIC3.07□□□□□ -1.92
TRIM55Q9BYV6 AC087441.2-201ENST00000529141 262 ntBASIC3.07□□□□□ -1.92
TRIM55Q9BYV6 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM55Q9BYV6 AC078938.1-201ENST00000620993 318 ntBASIC3.07□□□□□ -1.92
TRIM55Q9BYV6 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TRIM55Q9BYV6 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
TRIM55Q9BYV6 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TRIM55Q9BYV6 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
TRIM55Q9BYV6 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
TRIM55Q9BYV6 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms