Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 RNU6-975P-201ENST00000384296 105 ntBASIC2.57□□□□□ -2
TRIM54Q9BYV2 Y_RNA.556-201ENST00000384677 113 ntBASIC2.57□□□□□ -2
TRIM54Q9BYV2 Y_RNA.570-201ENST00000384750 101 ntBASIC2.57□□□□□ -2
TRIM54Q9BYV2 AC123900.1-201ENST00000420390 96 ntBASIC2.57□□□□□ -2
TRIM54Q9BYV2 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.57□□□□□ -2
TRIM54Q9BYV2 PRELID3BP1-201ENST00000457142 540 ntBASIC2.57□□□□□ -2
TRIM54Q9BYV2 RNU6-948P-201ENST00000516374 107 ntBASIC2.57□□□□□ -2
TRIM54Q9BYV2 RNU2-34P-201ENST00000516534 121 ntBASIC2.57□□□□□ -2
TRIM54Q9BYV2 SNORA31.15-201ENST00000516771 132 ntBASIC2.57□□□□□ -2
TRIM54Q9BYV2 LARP7P3-201ENST00000579888 337 ntBASIC2.57□□□□□ -2
TRIM54Q9BYV2 MIR4423-201ENST00000580922 80 ntBASIC2.57□□□□□ -2
TRIM54Q9BYV2 MIR5092-201ENST00000583139 88 ntBASIC2.57□□□□□ -2
TRIM54Q9BYV2 AC004467.1-201ENST00000615678 330 ntBASIC2.57□□□□□ -2
TRIM54Q9BYV2 MIR8062-201ENST00000621515 85 ntBASIC2.57□□□□□ -2
TRIM54Q9BYV2 MIR6073-201ENST00000352083 89 ntBASIC2.56□□□□□ -2
TRIM54Q9BYV2 Y_RNA.26-201ENST00000362539 101 ntBASIC2.56□□□□□ -2
TRIM54Q9BYV2 Y_RNA.105-201ENST00000363182 111 ntBASIC2.56□□□□□ -2
TRIM54Q9BYV2 SNORD113-8-201ENST00000363497 74 ntBASIC2.56□□□□□ -2
TRIM54Q9BYV2 Y_RNA.332-201ENST00000365271 113 ntBASIC2.56□□□□□ -2
TRIM54Q9BYV2 AL139095.1-201ENST00000404326 391 ntBASIC2.56□□□□□ -2
TRIM54Q9BYV2 MIR1302-6-201ENST00000408466 90 ntBASIC2.56□□□□□ -2
TRIM54Q9BYV2 RNU6-121P-201ENST00000410525 99 ntBASIC2.56□□□□□ -2
TRIM54Q9BYV2 Y_RNA.602-201ENST00000410535 92 ntBASIC2.56□□□□□ -2
TRIM54Q9BYV2 RPL23AP36-201ENST00000413895 458 ntBASIC2.56□□□□□ -2
TRIM54Q9BYV2 AC096920.1-201ENST00000423991 241 ntBASIC2.56□□□□□ -2
TRIM54Q9BYV2 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.56□□□□□ -2
TRIM54Q9BYV2 SUMO1P4-201ENST00000429430 302 ntBASIC2.56□□□□□ -2
TRIM54Q9BYV2 SEPT14P8-201ENST00000508026 178 ntBASIC2.56□□□□□ -2
TRIM54Q9BYV2 MYL12BP1-201ENST00000569826 507 ntBASIC2.56□□□□□ -2
TRIM54Q9BYV2 AC026271.5-201ENST00000577873 130 ntBASIC2.56□□□□□ -2
TRIM54Q9BYV2 AC006380.1-201ENST00000603598 186 ntBASIC2.56□□□□□ -2
TRIM54Q9BYV2 SNORD113-5-201ENST00000607261 78 ntBASIC2.56□□□□□ -2
TRIM54Q9BYV2 AC091932.3-201ENST00000624223 323 ntBASIC2.56□□□□□ -2
TRIM54Q9BYV2 snoZ196.1-201ENST00000625269 89 ntBASIC2.56□□□□□ -2
TRIM54Q9BYV2 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.56□□□□□ -2
TRIM54Q9BYV2 FO624990.1-201ENST00000636373 85 ntBASIC2.56□□□□□ -2
TRIM54Q9BYV2 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TRIM54Q9BYV2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
TRIM54Q9BYV2 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TRIM54Q9BYV2 AC009487.4-201ENST00000624969 3585 ntBASIC2.55□□□□□ -2
TRIM54Q9BYV2 RNU6-859P-201ENST00000362728 107 ntBASIC2.55□□□□□ -2
TRIM54Q9BYV2 Y_RNA.222-201ENST00000364264 102 ntBASIC2.55□□□□□ -2
TRIM54Q9BYV2 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
TRIM54Q9BYV2 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.55□□□□□ -2
TRIM54Q9BYV2 Y_RNA.461-201ENST00000384263 103 ntBASIC2.55□□□□□ -2
TRIM54Q9BYV2 MIR568-201ENST00000385036 95 ntBASIC2.55□□□□□ -2
TRIM54Q9BYV2 RNA5SP210-201ENST00000391034 120 ntBASIC2.55□□□□□ -2
TRIM54Q9BYV2 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
TRIM54Q9BYV2 RN7SKP284-201ENST00000411002 343 ntBASIC2.55□□□□□ -2
TRIM54Q9BYV2 RNU6-57P-201ENST00000411348 103 ntBASIC2.55□□□□□ -2
TRIM54Q9BYV2 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.55□□□□□ -2
TRIM54Q9BYV2 EDDM3CP-201ENST00000415977 425 ntBASIC2.55□□□□□ -2
TRIM54Q9BYV2 RPL21P38-201ENST00000418090 167 ntBASIC2.55□□□□□ -2
TRIM54Q9BYV2 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.55□□□□□ -2
TRIM54Q9BYV2 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.55□□□□□ -2
TRIM54Q9BYV2 AC245102.2-201ENST00000448956 180 ntBASIC2.55□□□□□ -2
TRIM54Q9BYV2 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.55□□□□□ -2
TRIM54Q9BYV2 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.55□□□□□ -2
TRIM54Q9BYV2 AC079600.2-201ENST00000550076 130 ntBASIC2.55□□□□□ -2
TRIM54Q9BYV2 MIR3126-201ENST00000577443 74 ntBASIC2.55□□□□□ -2
TRIM54Q9BYV2 MIR5194-201ENST00000582634 120 ntBASIC2.55□□□□□ -2
TRIM54Q9BYV2 MIR4658-201ENST00000584344 65 ntBASIC2.55□□□□□ -2
TRIM54Q9BYV2 AC010297.1-201ENST00000623948 149 ntBASIC2.55□□□□□ -2
TRIM54Q9BYV2 AP006437.1-201ENST00000641440 3685 ntBASIC2.55□□□□□ -2
TRIM54Q9BYV2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.55□□□□□ -2
TRIM54Q9BYV2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TRIM54Q9BYV2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.54□□□□□ -2
TRIM54Q9BYV2 RNU6-418P-201ENST00000384035 107 ntBASIC2.54□□□□□ -2
TRIM54Q9BYV2 RNU6-1235P-201ENST00000384559 107 ntBASIC2.54□□□□□ -2
TRIM54Q9BYV2 MIR1185-2-201ENST00000408687 86 ntBASIC2.54□□□□□ -2
TRIM54Q9BYV2 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.54□□□□□ -2
TRIM54Q9BYV2 AC005042.3-201ENST00000453230 174 ntBASIC2.54□□□□□ -2
TRIM54Q9BYV2 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.54□□□□□ -2
TRIM54Q9BYV2 RNU6-498P-201ENST00000459468 107 ntBASIC2.54□□□□□ -2
TRIM54Q9BYV2 CYCSP26-201ENST00000534107 320 ntBASIC2.54□□□□□ -2
TRIM54Q9BYV2 AC022441.3-201ENST00000605737 136 ntBASIC2.54□□□□□ -2
TRIM54Q9BYV2 AC013412.1-201ENST00000610687 192 ntBASIC2.54□□□□□ -2
TRIM54Q9BYV2 MIR7106-201ENST00000612419 65 ntBASIC2.54□□□□□ -2
TRIM54Q9BYV2 U4.1-201ENST00000620349 87 ntBASIC2.54□□□□□ -2
TRIM54Q9BYV2 AC006001.4-201ENST00000622243 395 ntBASIC2.54□□□□□ -2
TRIM54Q9BYV2 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.54□□□□□ -2
TRIM54Q9BYV2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.54□□□□□ -2
TRIM54Q9BYV2 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
TRIM54Q9BYV2 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.54□□□□□ -2
TRIM54Q9BYV2 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.53□□□□□ -2
TRIM54Q9BYV2 RNU4-90P-201ENST00000362773 141 ntBASIC2.53□□□□□ -2
TRIM54Q9BYV2 RNU6-1266P-201ENST00000362794 105 ntBASIC2.53□□□□□ -2
TRIM54Q9BYV2 Y_RNA.99-201ENST00000363138 105 ntBASIC2.53□□□□□ -2
TRIM54Q9BYV2 Y_RNA.331-201ENST00000365267 102 ntBASIC2.53□□□□□ -2
TRIM54Q9BYV2 Y_RNA.452-201ENST00000384202 108 ntBASIC2.53□□□□□ -2
TRIM54Q9BYV2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.53□□□□□ -2
TRIM54Q9BYV2 RNU4-30P-201ENST00000410245 143 ntBASIC2.53□□□□□ -2
TRIM54Q9BYV2 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.53□□□□□ -2
TRIM54Q9BYV2 RPS12P2-201ENST00000439728 269 ntBASIC2.53□□□□□ -2
TRIM54Q9BYV2 AC016717.1-201ENST00000448918 286 ntBASIC2.53□□□□□ -2
TRIM54Q9BYV2 SNORD109B-201ENST00000458961 67 ntBASIC2.53□□□□□ -2
TRIM54Q9BYV2 SNORD109A-201ENST00000459128 67 ntBASIC2.53□□□□□ -2
TRIM54Q9BYV2 AC098869.1-201ENST00000481627 292 ntBASIC2.53□□□□□ -2
TRIM54Q9BYV2 RNA5SP282-201ENST00000516355 108 ntBASIC2.53□□□□□ -2
TRIM54Q9BYV2 RNU6-570P-201ENST00000517051 105 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms