Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AC084781.2-201ENST00000615568 161 ntBASIC2.28□□□□□ -2.04
HERPUD2Q9BSE4 AC006001.4-201ENST00000622243 395 ntBASIC2.28□□□□□ -2.04
HERPUD2Q9BSE4 MIR1302-1-201ENST00000637932 143 ntBASIC2.28□□□□□ -2.04
HERPUD2Q9BSE4 AL359851.1-201ENST00000569460 4997 ntBASIC2.28□□□□□ -2.05
HERPUD2Q9BSE4 AC080100.1-201ENST00000624239 5356 ntBASIC2.27□□□□□ -2.05
HERPUD2Q9BSE4 Y_RNA.31-201ENST00000362574 102 ntBASIC2.27□□□□□ -2.05
HERPUD2Q9BSE4 RNU6-862P-201ENST00000362804 105 ntBASIC2.27□□□□□ -2.05
HERPUD2Q9BSE4 Y_RNA.387-201ENST00000383918 102 ntBASIC2.27□□□□□ -2.05
HERPUD2Q9BSE4 Y_RNA.415-201ENST00000384012 112 ntBASIC2.27□□□□□ -2.05
HERPUD2Q9BSE4 RNU6-281P-201ENST00000384212 103 ntBASIC2.27□□□□□ -2.05
HERPUD2Q9BSE4 RNU6-1297P-201ENST00000384415 104 ntBASIC2.27□□□□□ -2.05
HERPUD2Q9BSE4 MIR606-201ENST00000384851 96 ntBASIC2.27□□□□□ -2.05
HERPUD2Q9BSE4 RNU6-1304P-201ENST00000411374 106 ntBASIC2.27□□□□□ -2.05
HERPUD2Q9BSE4 OOSP1P1-201ENST00000423265 274 ntBASIC2.27□□□□□ -2.05
HERPUD2Q9BSE4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.27□□□□□ -2.05
HERPUD2Q9BSE4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.27□□□□□ -2.05
HERPUD2Q9BSE4 AC096638.1-201ENST00000444678 216 ntBASIC2.27□□□□□ -2.05
HERPUD2Q9BSE4 RPL30P15-201ENST00000457129 321 ntBASIC2.27□□□□□ -2.05
HERPUD2Q9BSE4 Y_RNA.639-201ENST00000458981 102 ntBASIC2.27□□□□□ -2.05
HERPUD2Q9BSE4 Y_RNA.653-201ENST00000459091 95 ntBASIC2.27□□□□□ -2.05
HERPUD2Q9BSE4 SNORD19B-201ENST00000459623 84 ntBASIC2.27□□□□□ -2.05
HERPUD2Q9BSE4 RPL23AP42-201ENST00000471152 471 ntBASIC2.27□□□□□ -2.05
HERPUD2Q9BSE4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.27□□□□□ -2.05
HERPUD2Q9BSE4 Y_RNA.683-201ENST00000516508 93 ntBASIC2.27□□□□□ -2.05
HERPUD2Q9BSE4 RNU6-1046P-201ENST00000516538 107 ntBASIC2.27□□□□□ -2.05
HERPUD2Q9BSE4 RNU6-1137P-201ENST00000517073 99 ntBASIC2.27□□□□□ -2.05
HERPUD2Q9BSE4 APOOP3-201ENST00000536787 586 ntBASIC2.27□□□□□ -2.05
HERPUD2Q9BSE4 AC008749.1-201ENST00000597650 306 ntBASIC2.27□□□□□ -2.05
HERPUD2Q9BSE4 AC022513.1-201ENST00000624512 117 ntBASIC2.27□□□□□ -2.05
HERPUD2Q9BSE4 AP000553.5-201ENST00000641933 54 ntBASIC2.27□□□□□ -2.05
HERPUD2Q9BSE4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
HERPUD2Q9BSE4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
HERPUD2Q9BSE4 MTND5P35-201ENST00000557537 1720 ntBASIC2.26□□□□□ -2.05
HERPUD2Q9BSE4 U3.8-201ENST00000363675 217 ntBASIC2.26□□□□□ -2.05
HERPUD2Q9BSE4 RNU1-96P-201ENST00000364163 162 ntBASIC2.26□□□□□ -2.05
HERPUD2Q9BSE4 RNU6-310P-201ENST00000384655 107 ntBASIC2.26□□□□□ -2.05
HERPUD2Q9BSE4 MIR568-201ENST00000385036 95 ntBASIC2.26□□□□□ -2.05
HERPUD2Q9BSE4 MIR548B-201ENST00000385247 97 ntBASIC2.26□□□□□ -2.05
HERPUD2Q9BSE4 RNU6-907P-201ENST00000390924 102 ntBASIC2.26□□□□□ -2.05
HERPUD2Q9BSE4 Y_RNA.579-201ENST00000390939 94 ntBASIC2.26□□□□□ -2.05
HERPUD2Q9BSE4 RNA5SP504-201ENST00000410676 117 ntBASIC2.26□□□□□ -2.05
HERPUD2Q9BSE4 Y_RNA.646-201ENST00000410980 101 ntBASIC2.26□□□□□ -2.05
HERPUD2Q9BSE4 AC008134.1-201ENST00000420943 193 ntBASIC2.26□□□□□ -2.05
HERPUD2Q9BSE4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.26□□□□□ -2.05
HERPUD2Q9BSE4 AC010095.1-201ENST00000443543 144 ntBASIC2.26□□□□□ -2.05
HERPUD2Q9BSE4 NDUFB4P10-201ENST00000452541 359 ntBASIC2.26□□□□□ -2.05
HERPUD2Q9BSE4 FRG2DP-202ENST00000566967 323 ntBASIC2.26□□□□□ -2.05
HERPUD2Q9BSE4 MZT1P2-201ENST00000604387 248 ntBASIC2.26□□□□□ -2.05
HERPUD2Q9BSE4 AC069114.2-201ENST00000604699 304 ntBASIC2.26□□□□□ -2.05
HERPUD2Q9BSE4 AC091932.3-201ENST00000624223 323 ntBASIC2.26□□□□□ -2.05
HERPUD2Q9BSE4 U8.2-201ENST00000363156 134 ntBASIC2.25□□□□□ -2.05
HERPUD2Q9BSE4 Y_RNA.133-201ENST00000363428 110 ntBASIC2.25□□□□□ -2.05
HERPUD2Q9BSE4 RNU6-99P-201ENST00000364721 107 ntBASIC2.25□□□□□ -2.05
HERPUD2Q9BSE4 SNORA75.6-201ENST00000391318 127 ntBASIC2.25□□□□□ -2.05
HERPUD2Q9BSE4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.25□□□□□ -2.05
HERPUD2Q9BSE4 Z98742.3-201ENST00000418637 326 ntBASIC2.25□□□□□ -2.05
HERPUD2Q9BSE4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.25□□□□□ -2.05
HERPUD2Q9BSE4 RPL23AP7-203ENST00000449021 469 ntBASIC2.25□□□□□ -2.05
HERPUD2Q9BSE4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.25□□□□□ -2.05
HERPUD2Q9BSE4 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.25□□□□□ -2.05
HERPUD2Q9BSE4 RNU6-107P-201ENST00000516643 102 ntBASIC2.25□□□□□ -2.05
HERPUD2Q9BSE4 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.25□□□□□ -2.05
HERPUD2Q9BSE4 SUB1P4-201ENST00000566062 339 ntBASIC2.25□□□□□ -2.05
HERPUD2Q9BSE4 MIR1273D-201ENST00000577266 86 ntBASIC2.25□□□□□ -2.05
HERPUD2Q9BSE4 MIR4713-201ENST00000582691 75 ntBASIC2.25□□□□□ -2.05
HERPUD2Q9BSE4 AL096840.1-201ENST00000603287 93 ntBASIC2.25□□□□□ -2.05
HERPUD2Q9BSE4 AP000942.4-201ENST00000604811 241 ntBASIC2.25□□□□□ -2.05
HERPUD2Q9BSE4 AC010205.1-201ENST00000616668 449 ntBASIC2.25□□□□□ -2.05
HERPUD2Q9BSE4 AC134503.1-201ENST00000633048 54 ntBASIC2.25□□□□□ -2.05
HERPUD2Q9BSE4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 MIR369-201ENST00000362155 70 ntBASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 RNU6-879P-201ENST00000364328 108 ntBASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 Y_RNA.259-201ENST00000364619 101 ntBASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 RNA5SP160-201ENST00000364866 120 ntBASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 Y_RNA.358-201ENST00000365491 99 ntBASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 RNU6-574P-201ENST00000384265 107 ntBASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 Y_RNA.595-201ENST00000410403 105 ntBASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 RNA5SP100-201ENST00000410903 110 ntBASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 RNA5SP59-201ENST00000410922 110 ntBASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 AC009310.1-201ENST00000414414 451 ntBASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 PMCHL1-202ENST00000423102 261 ntBASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 MIR2053-201ENST00000459295 91 ntBASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 AC022493.2-201ENST00000506122 481 ntBASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 Y_RNA.711-201ENST00000516993 102 ntBASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 CYCSP23-201ENST00000519781 313 ntBASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 SNRPGP18-201ENST00000553000 214 ntBASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 MIR1244-1-201ENST00000612829 85 ntBASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 MIR1244-3-201ENST00000635744 85 ntBASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 MIR1244-2-201ENST00000636449 85 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms