Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.42□□□□□ -2.02
PAAF1Q9BRP4 AL137159.1-201ENST00000452808 512 ntBASIC2.42□□□□□ -2.02
PAAF1Q9BRP4 MRPS35P2-201ENST00000508242 191 ntBASIC2.42□□□□□ -2.02
PAAF1Q9BRP4 AC093259.1-201ENST00000509755 300 ntBASIC2.42□□□□□ -2.02
PAAF1Q9BRP4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.42□□□□□ -2.02
PAAF1Q9BRP4 AC018448.1-201ENST00000552843 316 ntBASIC2.42□□□□□ -2.02
PAAF1Q9BRP4 AC136443.5-201ENST00000603741 370 ntBASIC2.42□□□□□ -2.02
PAAF1Q9BRP4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.42□□□□□ -2.02
PAAF1Q9BRP4 MIR6766-201ENST00000622641 72 ntBASIC2.42□□□□□ -2.02
PAAF1Q9BRP4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PAAF1Q9BRP4 AC245060.5-201ENST00000610778 3293 ntBASIC2.41□□□□□ -2.02
PAAF1Q9BRP4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.41□□□□□ -2.02
PAAF1Q9BRP4 SNORA67.3-201ENST00000384366 140 ntBASIC2.41□□□□□ -2.02
PAAF1Q9BRP4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.41□□□□□ -2.02
PAAF1Q9BRP4 MTATP8P1-201ENST00000467115 207 ntBASIC2.41□□□□□ -2.02
PAAF1Q9BRP4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.41□□□□□ -2.02
PAAF1Q9BRP4 AC067942.3-201ENST00000512025 362 ntBASIC2.41□□□□□ -2.02
PAAF1Q9BRP4 RNY3P15-201ENST00000516297 97 ntBASIC2.41□□□□□ -2.02
PAAF1Q9BRP4 IGKV3-31-201ENST00000523109 329 ntBASIC2.41□□□□□ -2.02
PAAF1Q9BRP4 AC233702.2-202ENST00000562547 291 ntBASIC2.41□□□□□ -2.02
PAAF1Q9BRP4 AC026271.5-201ENST00000577873 130 ntBASIC2.41□□□□□ -2.02
PAAF1Q9BRP4 AL021879.1-201ENST00000611756 288 ntBASIC2.41□□□□□ -2.02
PAAF1Q9BRP4 MIR6873-201ENST00000622788 63 ntBASIC2.41□□□□□ -2.02
PAAF1Q9BRP4 AC131280.1-202ENST00000624067 4211 ntBASIC2.41□□□□□ -2.02
PAAF1Q9BRP4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.02
PAAF1Q9BRP4 Y_RNA.153-201ENST00000363615 91 ntBASIC2.4□□□□□ -2.03
PAAF1Q9BRP4 MIR1289-2-201ENST00000408360 111 ntBASIC2.4□□□□□ -2.03
PAAF1Q9BRP4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.4□□□□□ -2.03
PAAF1Q9BRP4 RNU2-48P-201ENST00000410694 191 ntBASIC2.4□□□□□ -2.03
PAAF1Q9BRP4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.4□□□□□ -2.03
PAAF1Q9BRP4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.4□□□□□ -2.03
PAAF1Q9BRP4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.4□□□□□ -2.03
PAAF1Q9BRP4 PRELID3BP1-201ENST00000457142 540 ntBASIC2.4□□□□□ -2.03
PAAF1Q9BRP4 HMGN2P9-201ENST00000476875 229 ntBASIC2.4□□□□□ -2.03
PAAF1Q9BRP4 PRELID2P1-201ENST00000552837 301 ntBASIC2.4□□□□□ -2.03
PAAF1Q9BRP4 RAC1P9-201ENST00000604990 392 ntBASIC2.4□□□□□ -2.03
PAAF1Q9BRP4 AC010205.1-201ENST00000616668 449 ntBASIC2.4□□□□□ -2.03
PAAF1Q9BRP4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.39□□□□□ -2.03
PAAF1Q9BRP4 RNU6-626P-201ENST00000363354 107 ntBASIC2.39□□□□□ -2.03
PAAF1Q9BRP4 Y_RNA.143-201ENST00000363520 106 ntBASIC2.39□□□□□ -2.03
PAAF1Q9BRP4 U3.8-201ENST00000363675 217 ntBASIC2.39□□□□□ -2.03
PAAF1Q9BRP4 RNU6-1310P-201ENST00000384153 107 ntBASIC2.39□□□□□ -2.03
PAAF1Q9BRP4 RPL39P40-201ENST00000445481 146 ntBASIC2.39□□□□□ -2.03
PAAF1Q9BRP4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.39□□□□□ -2.03
PAAF1Q9BRP4 RNU7-57P-201ENST00000459540 60 ntBASIC2.39□□□□□ -2.03
PAAF1Q9BRP4 RPS27AP9-201ENST00000477681 438 ntBASIC2.39□□□□□ -2.03
PAAF1Q9BRP4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.39□□□□□ -2.03
PAAF1Q9BRP4 RNU6-1046P-201ENST00000516538 107 ntBASIC2.39□□□□□ -2.03
PAAF1Q9BRP4 RNU6-635P-201ENST00000516651 102 ntBASIC2.39□□□□□ -2.03
PAAF1Q9BRP4 RNU6-897P-201ENST00000517135 105 ntBASIC2.39□□□□□ -2.03
PAAF1Q9BRP4 CYCSP26-201ENST00000534107 320 ntBASIC2.39□□□□□ -2.03
PAAF1Q9BRP4 NDUFA5P6-201ENST00000542110 379 ntBASIC2.39□□□□□ -2.03
PAAF1Q9BRP4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.39□□□□□ -2.03
PAAF1Q9BRP4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.39□□□□□ -2.03
PAAF1Q9BRP4 AC008269.2-201ENST00000561915 1105 ntBASIC2.39□□□□□ -2.03
PAAF1Q9BRP4 AC005176.2-201ENST00000596933 147 ntBASIC2.39□□□□□ -2.03
PAAF1Q9BRP4 AC005034.5-201ENST00000604219 466 ntBASIC2.39□□□□□ -2.03
PAAF1Q9BRP4 AC008873.1-201ENST00000625051 138 ntBASIC2.39□□□□□ -2.03
PAAF1Q9BRP4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.39□□□□□ -2.03
PAAF1Q9BRP4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
PAAF1Q9BRP4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PAAF1Q9BRP4 RNA5SP432-201ENST00000362480 116 ntBASIC2.38□□□□□ -2.03
PAAF1Q9BRP4 SNORD115-3-201ENST00000363100 82 ntBASIC2.38□□□□□ -2.03
PAAF1Q9BRP4 RNU6-238P-201ENST00000363313 106 ntBASIC2.38□□□□□ -2.03
PAAF1Q9BRP4 RNU6-961P-201ENST00000363893 105 ntBASIC2.38□□□□□ -2.03
PAAF1Q9BRP4 RNU6-418P-201ENST00000384035 107 ntBASIC2.38□□□□□ -2.03
PAAF1Q9BRP4 RNU6-20P-201ENST00000384106 107 ntBASIC2.38□□□□□ -2.03
PAAF1Q9BRP4 SNORA67.2-201ENST00000384300 149 ntBASIC2.38□□□□□ -2.03
PAAF1Q9BRP4 MIR548B-201ENST00000385247 97 ntBASIC2.38□□□□□ -2.03
PAAF1Q9BRP4 RNU2-20P-201ENST00000410425 191 ntBASIC2.38□□□□□ -2.03
PAAF1Q9BRP4 RNA5SP504-201ENST00000410676 117 ntBASIC2.38□□□□□ -2.03
PAAF1Q9BRP4 ELOCP21-201ENST00000412558 336 ntBASIC2.38□□□□□ -2.03
PAAF1Q9BRP4 SRIP3-201ENST00000413200 219 ntBASIC2.38□□□□□ -2.03
PAAF1Q9BRP4 AC123900.1-201ENST00000420390 96 ntBASIC2.38□□□□□ -2.03
PAAF1Q9BRP4 RAB28P5-201ENST00000427490 651 ntBASIC2.38□□□□□ -2.03
PAAF1Q9BRP4 AC073910.1-201ENST00000445047 438 ntBASIC2.38□□□□□ -2.03
PAAF1Q9BRP4 AC245102.2-201ENST00000448956 180 ntBASIC2.38□□□□□ -2.03
PAAF1Q9BRP4 AC016925.1-201ENST00000458303 298 ntBASIC2.38□□□□□ -2.03
PAAF1Q9BRP4 RNU6-948P-201ENST00000516374 107 ntBASIC2.38□□□□□ -2.03
PAAF1Q9BRP4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.38□□□□□ -2.03
PAAF1Q9BRP4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.38□□□□□ -2.03
PAAF1Q9BRP4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.38□□□□□ -2.03
PAAF1Q9BRP4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.38□□□□□ -2.03
PAAF1Q9BRP4 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.38□□□□□ -2.03
PAAF1Q9BRP4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.38□□□□□ -2.03
PAAF1Q9BRP4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.38□□□□□ -2.03
PAAF1Q9BRP4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
PAAF1Q9BRP4 Y_RNA.183-201ENST00000363882 113 ntBASIC2.37□□□□□ -2.03
PAAF1Q9BRP4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
PAAF1Q9BRP4 RNU6-1264P-201ENST00000383891 107 ntBASIC2.37□□□□□ -2.03
PAAF1Q9BRP4 snosnR66.1-201ENST00000391095 99 ntBASIC2.37□□□□□ -2.03
PAAF1Q9BRP4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PAAF1Q9BRP4 EDDM3CP-201ENST00000415977 425 ntBASIC2.37□□□□□ -2.03
PAAF1Q9BRP4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.37□□□□□ -2.03
PAAF1Q9BRP4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.37□□□□□ -2.03
PAAF1Q9BRP4 AC010655.3-201ENST00000478818 450 ntBASIC2.37□□□□□ -2.03
PAAF1Q9BRP4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.37□□□□□ -2.03
PAAF1Q9BRP4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.37□□□□□ -2.03
PAAF1Q9BRP4 MIR7843-201ENST00000622274 79 ntBASIC2.37□□□□□ -2.03
PAAF1Q9BRP4 AC130454.1-201ENST00000622948 401 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms