Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 RPL23AP3-201ENST00000453844 468 ntBASIC1.54□□□□□ -2.16
EBF4Q9BQW3 RNA5SP182-201ENST00000516064 82 ntBASIC1.54□□□□□ -2.16
EBF4Q9BQW3 RNU6-567P-201ENST00000516746 107 ntBASIC1.54□□□□□ -2.16
EBF4Q9BQW3 RN7SKP295-201ENST00000517264 153 ntBASIC1.54□□□□□ -2.16
EBF4Q9BQW3 AP005660.1-201ENST00000522972 293 ntBASIC1.54□□□□□ -2.16
EBF4Q9BQW3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.54□□□□□ -2.16
EBF4Q9BQW3 AL590705.4-201ENST00000532209 134 ntBASIC1.54□□□□□ -2.16
EBF4Q9BQW3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.54□□□□□ -2.16
EBF4Q9BQW3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.54□□□□□ -2.16
EBF4Q9BQW3 MIR4719-201ENST00000585233 84 ntBASIC1.54□□□□□ -2.16
EBF4Q9BQW3 AC092447.9-201ENST00000603395 144 ntBASIC1.54□□□□□ -2.16
EBF4Q9BQW3 AC104695.3-201ENST00000604052 296 ntBASIC1.54□□□□□ -2.16
EBF4Q9BQW3 MIR8081-201ENST00000611533 95 ntBASIC1.54□□□□□ -2.16
EBF4Q9BQW3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.53□□□□□ -2.16
EBF4Q9BQW3 Y_RNA.99-201ENST00000363138 105 ntBASIC1.53□□□□□ -2.16
EBF4Q9BQW3 Y_RNA.332-201ENST00000365271 113 ntBASIC1.53□□□□□ -2.16
EBF4Q9BQW3 Y_RNA.358-201ENST00000365491 99 ntBASIC1.53□□□□□ -2.16
EBF4Q9BQW3 Y_RNA.557-201ENST00000384680 107 ntBASIC1.53□□□□□ -2.16
EBF4Q9BQW3 RNU6-997P-201ENST00000384725 107 ntBASIC1.53□□□□□ -2.16
EBF4Q9BQW3 MIR29C-201ENST00000385231 88 ntBASIC1.53□□□□□ -2.16
EBF4Q9BQW3 RNU6-1093P-201ENST00000391194 107 ntBASIC1.53□□□□□ -2.16
EBF4Q9BQW3 AL357139.1-201ENST00000407792 426 ntBASIC1.53□□□□□ -2.16
EBF4Q9BQW3 MIR1302-11-201ENST00000408051 138 ntBASIC1.53□□□□□ -2.16
EBF4Q9BQW3 SNORA11.2-201ENST00000408318 127 ntBASIC1.53□□□□□ -2.16
EBF4Q9BQW3 MIR1302-9-201ENST00000408365 138 ntBASIC1.53□□□□□ -2.16
EBF4Q9BQW3 MIR1302-10-201ENST00000408734 138 ntBASIC1.53□□□□□ -2.16
EBF4Q9BQW3 RN7SKP284-201ENST00000411002 343 ntBASIC1.53□□□□□ -2.16
EBF4Q9BQW3 AC004866.1-201ENST00000411748 78 ntBASIC1.53□□□□□ -2.16
EBF4Q9BQW3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.53□□□□□ -2.16
EBF4Q9BQW3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.53□□□□□ -2.16
EBF4Q9BQW3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.53□□□□□ -2.16
EBF4Q9BQW3 AL118496.2-201ENST00000448300 230 ntBASIC1.53□□□□□ -2.16
EBF4Q9BQW3 snoU13.30-201ENST00000458951 104 ntBASIC1.53□□□□□ -2.16
EBF4Q9BQW3 MTND5P16-201ENST00000460269 1703 ntBASIC1.53□□□□□ -2.16
EBF4Q9BQW3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.53□□□□□ -2.16
EBF4Q9BQW3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.53□□□□□ -2.16
EBF4Q9BQW3 AC027288.2-201ENST00000553028 243 ntBASIC1.53□□□□□ -2.16
EBF4Q9BQW3 AC090517.1-201ENST00000569307 266 ntBASIC1.53□□□□□ -2.16
EBF4Q9BQW3 AC004584.2-201ENST00000570407 410 ntBASIC1.53□□□□□ -2.16
EBF4Q9BQW3 AC016727.2-201ENST00000603988 621 ntBASIC1.53□□□□□ -2.16
EBF4Q9BQW3 MIR1302-2-201ENST00000607096 138 ntBASIC1.53□□□□□ -2.16
EBF4Q9BQW3 AL590240.4-201ENST00000616908 390 ntBASIC1.53□□□□□ -2.16
EBF4Q9BQW3 SCARNA4-201ENST00000629045 128 ntBASIC1.53□□□□□ -2.16
EBF4Q9BQW3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.53□□□□□ -2.17
EBF4Q9BQW3 RNU1-58P-201ENST00000362413 163 ntBASIC1.52□□□□□ -2.17
EBF4Q9BQW3 SNORA63C-201ENST00000364578 129 ntBASIC1.52□□□□□ -2.17
EBF4Q9BQW3 RNU6-450P-201ENST00000364654 107 ntBASIC1.52□□□□□ -2.17
EBF4Q9BQW3 SNORA33.2-201ENST00000365413 134 ntBASIC1.52□□□□□ -2.17
EBF4Q9BQW3 SNORA18.2-201ENST00000383865 132 ntBASIC1.52□□□□□ -2.17
EBF4Q9BQW3 RNU6-17P-201ENST00000384245 107 ntBASIC1.52□□□□□ -2.17
EBF4Q9BQW3 RNU6-18P-201ENST00000384527 107 ntBASIC1.52□□□□□ -2.17
EBF4Q9BQW3 RNA5SP213-201ENST00000391031 106 ntBASIC1.52□□□□□ -2.17
EBF4Q9BQW3 RNU11-3P-201ENST00000391111 133 ntBASIC1.52□□□□□ -2.17
EBF4Q9BQW3 MIR190B-201ENST00000401119 79 ntBASIC1.52□□□□□ -2.17
EBF4Q9BQW3 RNA5SP508-201ENST00000411327 119 ntBASIC1.52□□□□□ -2.17
EBF4Q9BQW3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.52□□□□□ -2.17
EBF4Q9BQW3 RPL23AP6-201ENST00000446637 472 ntBASIC1.52□□□□□ -2.17
EBF4Q9BQW3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
EBF4Q9BQW3 RNU7-87P-201ENST00000459343 62 ntBASIC1.52□□□□□ -2.17
EBF4Q9BQW3 AP000870.1-201ENST00000472927 406 ntBASIC1.52□□□□□ -2.17
EBF4Q9BQW3 HMGN1P10-201ENST00000474557 553 ntBASIC1.52□□□□□ -2.17
EBF4Q9BQW3 RPL23AP63-201ENST00000498752 471 ntBASIC1.52□□□□□ -2.17
EBF4Q9BQW3 AC114801.2-201ENST00000503825 781 ntBASIC1.52□□□□□ -2.17
EBF4Q9BQW3 RNU6-976P-201ENST00000516086 111 ntBASIC1.52□□□□□ -2.17
EBF4Q9BQW3 RNU6-250P-201ENST00000516958 103 ntBASIC1.52□□□□□ -2.17
EBF4Q9BQW3 RNU6-264P-201ENST00000517134 104 ntBASIC1.52□□□□□ -2.17
EBF4Q9BQW3 AC016256.1-201ENST00000547971 354 ntBASIC1.52□□□□□ -2.17
EBF4Q9BQW3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.52□□□□□ -2.17
EBF4Q9BQW3 MIR3169-201ENST00000578032 83 ntBASIC1.52□□□□□ -2.17
EBF4Q9BQW3 AC005899.2-201ENST00000584353 90 ntBASIC1.52□□□□□ -2.17
EBF4Q9BQW3 AC016925.2-201ENST00000605108 242 ntBASIC1.52□□□□□ -2.17
EBF4Q9BQW3 AC022513.1-201ENST00000624512 117 ntBASIC1.52□□□□□ -2.17
EBF4Q9BQW3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.52□□□□□ -2.17
EBF4Q9BQW3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.52□□□□□ -2.17
EBF4Q9BQW3 RNA5SP361-201ENST00000362686 118 ntBASIC1.51□□□□□ -2.17
EBF4Q9BQW3 RNU1-76P-201ENST00000362903 159 ntBASIC1.51□□□□□ -2.17
EBF4Q9BQW3 Y_RNA.527-201ENST00000384573 102 ntBASIC1.51□□□□□ -2.17
EBF4Q9BQW3 Y_RNA.577-201ENST00000384794 101 ntBASIC1.51□□□□□ -2.17
EBF4Q9BQW3 SNORA40.19-201ENST00000390846 128 ntBASIC1.51□□□□□ -2.17
EBF4Q9BQW3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.51□□□□□ -2.17
EBF4Q9BQW3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.51□□□□□ -2.17
EBF4Q9BQW3 AC245102.2-201ENST00000448956 180 ntBASIC1.51□□□□□ -2.17
EBF4Q9BQW3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.51□□□□□ -2.17
EBF4Q9BQW3 AC132942.1-201ENST00000486753 483 ntBASIC1.51□□□□□ -2.17
EBF4Q9BQW3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.51□□□□□ -2.17
EBF4Q9BQW3 SNORD116.3-201ENST00000517176 78 ntBASIC1.51□□□□□ -2.17
EBF4Q9BQW3 AC087441.2-201ENST00000529141 262 ntBASIC1.51□□□□□ -2.17
EBF4Q9BQW3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.51□□□□□ -2.17
EBF4Q9BQW3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.51□□□□□ -2.17
EBF4Q9BQW3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.51□□□□□ -2.17
EBF4Q9BQW3 MIR4435-1-201ENST00000582552 80 ntBASIC1.51□□□□□ -2.17
EBF4Q9BQW3 MIR5188-201ENST00000583467 113 ntBASIC1.51□□□□□ -2.17
EBF4Q9BQW3 AL360085.1-201ENST00000604713 532 ntBASIC1.51□□□□□ -2.17
EBF4Q9BQW3 AC133104.2-201ENST00000615272 193 ntBASIC1.51□□□□□ -2.17
EBF4Q9BQW3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.51□□□□□ -2.17
EBF4Q9BQW3 MIR4272-201ENST00000635924 64 ntBASIC1.51□□□□□ -2.17
EBF4Q9BQW3 RNA5SP493-201ENST00000364115 91 ntBASIC1.5□□□□□ -2.17
EBF4Q9BQW3 RNU4-9P-201ENST00000364951 139 ntBASIC1.5□□□□□ -2.17
EBF4Q9BQW3 Y_RNA.428-201ENST00000384078 102 ntBASIC1.5□□□□□ -2.17
EBF4Q9BQW3 MIR10B-201ENST00000385011 110 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms