Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 SNORA48.2-201ENST00000390926 124 ntBASIC1.89□□□□□ -2.11
GFI1Q99684 RNU6-308P-201ENST00000390957 107 ntBASIC1.89□□□□□ -2.11
GFI1Q99684 AC060773.1-201ENST00000421698 310 ntBASIC1.89□□□□□ -2.11
GFI1Q99684 RAB28P5-201ENST00000427490 651 ntBASIC1.89□□□□□ -2.11
GFI1Q99684 IPO7P1-201ENST00000442031 636 ntBASIC1.89□□□□□ -2.11
GFI1Q99684 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.89□□□□□ -2.11
GFI1Q99684 AL163540.1-201ENST00000485382 386 ntBASIC1.89□□□□□ -2.11
GFI1Q99684 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.89□□□□□ -2.11
GFI1Q99684 RNU6-408P-201ENST00000515910 100 ntBASIC1.89□□□□□ -2.11
GFI1Q99684 Y_RNA.711-201ENST00000516993 102 ntBASIC1.89□□□□□ -2.11
GFI1Q99684 Y_RNA.721-201ENST00000517207 102 ntBASIC1.89□□□□□ -2.11
GFI1Q99684 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.89□□□□□ -2.11
GFI1Q99684 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.89□□□□□ -2.11
GFI1Q99684 MIR4659A-201ENST00000580269 81 ntBASIC1.89□□□□□ -2.11
GFI1Q99684 AL121655.1-201ENST00000605811 308 ntBASIC1.89□□□□□ -2.11
GFI1Q99684 AL353149.1-201ENST00000610667 244 ntBASIC1.89□□□□□ -2.11
GFI1Q99684 AC006001.4-201ENST00000622243 395 ntBASIC1.89□□□□□ -2.11
GFI1Q99684 U6.92-201ENST00000636464 89 ntBASIC1.89□□□□□ -2.11
GFI1Q99684 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
GFI1Q99684 MIR144-201ENST00000384886 86 ntBASIC1.88□□□□□ -2.11
GFI1Q99684 MIR221-201ENST00000385135 110 ntBASIC1.88□□□□□ -2.11
GFI1Q99684 AL355497.1-201ENST00000406262 551 ntBASIC1.88□□□□□ -2.11
GFI1Q99684 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.88□□□□□ -2.11
GFI1Q99684 COTL1P1-201ENST00000422309 375 ntBASIC1.88□□□□□ -2.11
GFI1Q99684 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.88□□□□□ -2.11
GFI1Q99684 RNU6-1041P-201ENST00000516254 102 ntBASIC1.88□□□□□ -2.11
GFI1Q99684 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.88□□□□□ -2.11
GFI1Q99684 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.88□□□□□ -2.11
GFI1Q99684 MYL12BP1-201ENST00000569826 507 ntBASIC1.88□□□□□ -2.11
GFI1Q99684 MIR3171-201ENST00000584270 74 ntBASIC1.88□□□□□ -2.11
GFI1Q99684 AL390123.1-201ENST00000603216 237 ntBASIC1.88□□□□□ -2.11
GFI1Q99684 Y_RNA.772-201ENST00000606692 102 ntBASIC1.88□□□□□ -2.11
GFI1Q99684 AC240442.1-201ENST00000616055 283 ntBASIC1.88□□□□□ -2.11
GFI1Q99684 AC010205.1-201ENST00000616668 449 ntBASIC1.88□□□□□ -2.11
GFI1Q99684 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
GFI1Q99684 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
GFI1Q99684 snoU2-30.2-201ENST00000362805 70 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 Y_RNA.148-201ENST00000363557 117 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 SNORA63.7-201ENST00000365579 123 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 SNORA22B-201ENST00000383876 138 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 RNU6-301P-201ENST00000384277 107 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 Y_RNA.485-201ENST00000384395 102 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 SNORA67.4-201ENST00000384688 142 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 MIR196B-201ENST00000384852 84 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 MIR515-2-201ENST00000384883 83 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 MIR515-1-201ENST00000384884 83 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
GFI1Q99684 SNORA48.1-201ENST00000390879 135 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 MRPL42P3-201ENST00000401492 326 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 AL512604.1-201ENST00000404812 257 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.87□□□□□ -2.11
GFI1Q99684 MTND1P14-201ENST00000427400 950 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 AC092017.2-201ENST00000427600 362 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.87□□□□□ -2.11
GFI1Q99684 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.87□□□□□ -2.11
GFI1Q99684 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.87□□□□□ -2.11
GFI1Q99684 AC022616.4-201ENST00000522985 181 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 AC040926.1-201ENST00000530195 238 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 AL442663.2-201ENST00000554385 511 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 AC020661.2-201ENST00000560114 134 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 AL356055.1-201ENST00000602528 446 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 AL109918.3-201ENST00000603072 338 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.87□□□□□ -2.11
GFI1Q99684 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 U2.15-201ENST00000611544 191 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 U2.16-201ENST00000613119 191 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 U2.12-201ENST00000613778 191 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 U2.20-201ENST00000613956 192 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 U2.9-201ENST00000615427 191 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 U2.11-201ENST00000616345 191 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 U2.2-201ENST00000616535 191 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 U2.3-201ENST00000617785 191 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 U2.19-201ENST00000618602 191 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 RNU2-1-201ENST00000618664 191 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 U2.6-201ENST00000619225 191 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 U2.5-201ENST00000619465 191 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 U2.10-201ENST00000620268 191 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 AC091812.1-201ENST00000432235 1948 ntBASIC1.87□□□□□ -2.11
GFI1Q99684 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
GFI1Q99684 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
GFI1Q99684 SNORA72.2-201ENST00000365028 127 ntBASIC1.86□□□□□ -2.11
GFI1Q99684 RNU6-708P-201ENST00000384217 107 ntBASIC1.86□□□□□ -2.11
GFI1Q99684 RNA5SP501-201ENST00000410990 112 ntBASIC1.86□□□□□ -2.11
GFI1Q99684 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
GFI1Q99684 AL158823.1-201ENST00000418441 478 ntBASIC1.86□□□□□ -2.11
GFI1Q99684 CST2P1-201ENST00000425770 87 ntBASIC1.86□□□□□ -2.11
GFI1Q99684 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.86□□□□□ -2.11
GFI1Q99684 HMGN2P34-201ENST00000437647 269 ntBASIC1.86□□□□□ -2.11
GFI1Q99684 MTCYBP6-201ENST00000441810 138 ntBASIC1.86□□□□□ -2.11
GFI1Q99684 SUMO1P2-201ENST00000452524 304 ntBASIC1.86□□□□□ -2.11
GFI1Q99684 U8.20-201ENST00000459445 131 ntBASIC1.86□□□□□ -2.11
GFI1Q99684 AC025033.1-201ENST00000463883 194 ntBASIC1.86□□□□□ -2.11
GFI1Q99684 AC010469.2-201ENST00000496412 480 ntBASIC1.86□□□□□ -2.11
GFI1Q99684 YWHAEP4-201ENST00000505390 198 ntBASIC1.86□□□□□ -2.11
GFI1Q99684 RNA5SP356-201ENST00000515972 94 ntBASIC1.86□□□□□ -2.11
GFI1Q99684 AC121758.2-201ENST00000553271 193 ntBASIC1.86□□□□□ -2.11
GFI1Q99684 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.86□□□□□ -2.11
GFI1Q99684 MIR3944-201ENST00000581277 108 ntBASIC1.86□□□□□ -2.11
GFI1Q99684 AC022432.1-201ENST00000595739 310 ntBASIC1.86□□□□□ -2.11
GFI1Q99684 MIR6895-201ENST00000613497 78 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms