Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 RNU6-222P-201ENST00000362438 107 ntBASIC1.84□□□□□ -2.11
CDCA3Q99618 Y_RNA.67-201ENST00000362870 100 ntBASIC1.84□□□□□ -2.11
CDCA3Q99618 RNU6-137P-201ENST00000363680 108 ntBASIC1.84□□□□□ -2.11
CDCA3Q99618 Y_RNA.259-201ENST00000364619 101 ntBASIC1.84□□□□□ -2.11
CDCA3Q99618 RNU6-99P-201ENST00000364721 107 ntBASIC1.84□□□□□ -2.11
CDCA3Q99618 RNU6-418P-201ENST00000384035 107 ntBASIC1.84□□□□□ -2.11
CDCA3Q99618 RNU6-160P-201ENST00000384591 107 ntBASIC1.84□□□□□ -2.11
CDCA3Q99618 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
CDCA3Q99618 MIR300-201ENST00000401138 83 ntBASIC1.84□□□□□ -2.11
CDCA3Q99618 MTCYBP4-201ENST00000401524 249 ntBASIC1.84□□□□□ -2.11
CDCA3Q99618 MIR1283-2-201ENST00000408621 87 ntBASIC1.84□□□□□ -2.11
CDCA3Q99618 AC092423.1-201ENST00000430165 186 ntBASIC1.84□□□□□ -2.11
CDCA3Q99618 AC016925.1-201ENST00000458303 298 ntBASIC1.84□□□□□ -2.11
CDCA3Q99618 RNU6-264P-201ENST00000517134 104 ntBASIC1.84□□□□□ -2.11
CDCA3Q99618 AC087441.2-201ENST00000529141 262 ntBASIC1.84□□□□□ -2.11
CDCA3Q99618 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CDCA3Q99618 AC007229.1-201ENST00000590455 412 ntBASIC1.84□□□□□ -2.11
CDCA3Q99618 AC084781.2-201ENST00000615568 161 ntBASIC1.84□□□□□ -2.11
CDCA3Q99618 AL590240.4-201ENST00000616908 390 ntBASIC1.84□□□□□ -2.11
CDCA3Q99618 MTND5P16-201ENST00000460269 1703 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 MIR340-201ENST00000362125 95 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 RNU1-58P-201ENST00000362413 163 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 Y_RNA.58-201ENST00000362807 102 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 Y_RNA.154-201ENST00000363624 102 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 RNA5SP493-201ENST00000364115 91 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 RNU6-1305P-201ENST00000364353 104 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 RNY3P1-201ENST00000365085 102 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 RNY3-201ENST00000365484 102 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 RNU6-245P-201ENST00000384020 107 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 RNU6-890P-201ENST00000384121 107 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 SNORD116-29-201ENST00000384516 83 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 MIR597-201ENST00000384968 97 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CDCA3Q99618 SNORA75.6-201ENST00000391318 127 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 AL033519.2-201ENST00000403958 392 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 MIR1283-1-201ENST00000408494 87 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CDCA3Q99618 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.83□□□□□ -2.12
CDCA3Q99618 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.83□□□□□ -2.12
CDCA3Q99618 RPL23AP7-203ENST00000449021 469 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 AC007395.1-201ENST00000451333 677 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 RNU6-717P-201ENST00000459076 104 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 Y_RNA.632-201ENST00000459189 102 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 RNU7-95P-201ENST00000459222 64 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 AC022493.2-201ENST00000506122 481 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 RNU1-117P-201ENST00000517041 158 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 Y_RNA.718-201ENST00000517110 102 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 AC093027.1-201ENST00000546698 429 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.83□□□□□ -2.12
CDCA3Q99618 MIR5695-201ENST00000579717 85 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 MIR4753-201ENST00000585119 83 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 MIR1244-1-201ENST00000612829 85 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 AC005296.1-201ENST00000616145 209 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 MIR1244-3-201ENST00000635744 85 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 MIR1244-2-201ENST00000636449 85 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 MIR1244-4-202ENST00000636813 85 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.83□□□□□ -2.12
CDCA3Q99618 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CDCA3Q99618 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CDCA3Q99618 RNU6-874P-201ENST00000362390 105 ntBASIC1.82□□□□□ -2.12
CDCA3Q99618 RNA5SP276-201ENST00000362580 94 ntBASIC1.82□□□□□ -2.12
CDCA3Q99618 RNU6-23P-201ENST00000363283 107 ntBASIC1.82□□□□□ -2.12
CDCA3Q99618 RNU6-727P-201ENST00000363592 107 ntBASIC1.82□□□□□ -2.12
CDCA3Q99618 RNU6-280P-201ENST00000364145 104 ntBASIC1.82□□□□□ -2.12
CDCA3Q99618 SNORA16.1-201ENST00000364597 132 ntBASIC1.82□□□□□ -2.12
CDCA3Q99618 MIR10B-201ENST00000385011 110 ntBASIC1.82□□□□□ -2.12
CDCA3Q99618 RNA5SP450-201ENST00000411206 102 ntBASIC1.82□□□□□ -2.12
CDCA3Q99618 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CDCA3Q99618 AC007098.1-201ENST00000420122 367 ntBASIC1.82□□□□□ -2.12
CDCA3Q99618 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.82□□□□□ -2.12
CDCA3Q99618 USP9YP16-201ENST00000430287 407 ntBASIC1.82□□□□□ -2.12
CDCA3Q99618 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.82□□□□□ -2.12
CDCA3Q99618 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.82□□□□□ -2.12
CDCA3Q99618 USP9YP23-201ENST00000455085 407 ntBASIC1.82□□□□□ -2.12
CDCA3Q99618 AC010531.2-201ENST00000465012 153 ntBASIC1.82□□□□□ -2.12
CDCA3Q99618 RNA5SP364-201ENST00000516938 78 ntBASIC1.82□□□□□ -2.12
CDCA3Q99618 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.82□□□□□ -2.12
CDCA3Q99618 AC004584.2-201ENST00000570407 410 ntBASIC1.82□□□□□ -2.12
CDCA3Q99618 AL096840.1-201ENST00000603287 93 ntBASIC1.82□□□□□ -2.12
CDCA3Q99618 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.82□□□□□ -2.12
CDCA3Q99618 AL008636.1-201ENST00000625038 1018 ntBASIC1.82□□□□□ -2.12
CDCA3Q99618 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
CDCA3Q99618 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.81□□□□□ -2.12
CDCA3Q99618 RNU4-73P-201ENST00000363164 141 ntBASIC1.81□□□□□ -2.12
CDCA3Q99618 Y_RNA.355-201ENST00000365462 98 ntBASIC1.81□□□□□ -2.12
CDCA3Q99618 Y_RNA.364-201ENST00000365532 101 ntBASIC1.81□□□□□ -2.12
CDCA3Q99618 MIR518E-201ENST00000385252 88 ntBASIC1.81□□□□□ -2.12
CDCA3Q99618 RNY4P36-201ENST00000391116 96 ntBASIC1.81□□□□□ -2.12
CDCA3Q99618 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.81□□□□□ -2.12
CDCA3Q99618 AC096920.1-201ENST00000423991 241 ntBASIC1.81□□□□□ -2.12
CDCA3Q99618 MTCO1P44-201ENST00000441935 243 ntBASIC1.81□□□□□ -2.12
CDCA3Q99618 AC016717.1-201ENST00000448918 286 ntBASIC1.81□□□□□ -2.12
CDCA3Q99618 MTND3P22-201ENST00000510932 243 ntBASIC1.81□□□□□ -2.12
CDCA3Q99618 RNU6-470P-201ENST00000515954 104 ntBASIC1.81□□□□□ -2.12
CDCA3Q99618 RNU6-344P-201ENST00000516635 111 ntBASIC1.81□□□□□ -2.12
CDCA3Q99618 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.81□□□□□ -2.12
CDCA3Q99618 ZNF702P-202ENST00000434269 1966 ntBASIC1.8□□□□□ -2.12
CDCA3Q99618 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
CDCA3Q99618 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.8□□□□□ -2.12
CDCA3Q99618 RNU1-62P-201ENST00000362599 164 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 204.8 ms