Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HAPLN3Q96S86 Y_RNA.44-201ENST00000362676 108 ntBASIC2.73□□□□□ -1.97
HAPLN3Q96S86 Y_RNA.101-201ENST00000363154 102 ntBASIC2.73□□□□□ -1.97
HAPLN3Q96S86 Y_RNA.117-201ENST00000363294 101 ntBASIC2.73□□□□□ -1.97
HAPLN3Q96S86 RNU6-727P-201ENST00000363592 107 ntBASIC2.73□□□□□ -1.97
HAPLN3Q96S86 U3.9-201ENST00000363823 204 ntBASIC2.73□□□□□ -1.97
HAPLN3Q96S86 Y_RNA.230-201ENST00000364348 109 ntBASIC2.73□□□□□ -1.97
HAPLN3Q96S86 DEFA7P-201ENST00000382676 285 ntBASIC2.73□□□□□ -1.97
HAPLN3Q96S86 RNU4-70P-201ENST00000384579 139 ntBASIC2.73□□□□□ -1.97
HAPLN3Q96S86 MIR29B2-201ENST00000385055 81 ntBASIC2.73□□□□□ -1.97
HAPLN3Q96S86 MIR1298-201ENST00000408783 112 ntBASIC2.73□□□□□ -1.97
HAPLN3Q96S86 RNA5SP508-201ENST00000411327 119 ntBASIC2.73□□□□□ -1.97
HAPLN3Q96S86 AC004866.1-201ENST00000411748 78 ntBASIC2.73□□□□□ -1.97
HAPLN3Q96S86 RPL23AP58-201ENST00000440453 469 ntBASIC2.73□□□□□ -1.97
HAPLN3Q96S86 SUMO1P2-201ENST00000452524 304 ntBASIC2.73□□□□□ -1.97
HAPLN3Q96S86 PRELID3BP1-201ENST00000457142 540 ntBASIC2.73□□□□□ -1.97
HAPLN3Q96S86 Y_RNA.700-201ENST00000516806 100 ntBASIC2.73□□□□□ -1.97
HAPLN3Q96S86 RNU6-182P-201ENST00000516970 105 ntBASIC2.73□□□□□ -1.97
HAPLN3Q96S86 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.73□□□□□ -1.97
HAPLN3Q96S86 DEFB131C-201ENST00000528817 165 ntBASIC2.73□□□□□ -1.97
HAPLN3Q96S86 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.73□□□□□ -1.97
HAPLN3Q96S86 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.73□□□□□ -1.97
HAPLN3Q96S86 AC018448.1-201ENST00000552843 316 ntBASIC2.73□□□□□ -1.97
HAPLN3Q96S86 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.73□□□□□ -1.97
HAPLN3Q96S86 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.73□□□□□ -1.97
HAPLN3Q96S86 AC005176.2-201ENST00000596933 147 ntBASIC2.73□□□□□ -1.97
HAPLN3Q96S86 AL670379.2-201ENST00000604983 252 ntBASIC2.73□□□□□ -1.97
HAPLN3Q96S86 AC022441.3-201ENST00000605737 136 ntBASIC2.73□□□□□ -1.97
HAPLN3Q96S86 AC004792.1-201ENST00000614523 137 ntBASIC2.73□□□□□ -1.97
HAPLN3Q96S86 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.73□□□□□ -1.97
HAPLN3Q96S86 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HAPLN3Q96S86 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HAPLN3Q96S86 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.73□□□□□ -1.97
HAPLN3Q96S86 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.73□□□□□ -1.97
HAPLN3Q96S86 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
HAPLN3Q96S86 Y_RNA.200-201ENST00000364018 102 ntBASIC2.72□□□□□ -1.97
HAPLN3Q96S86 RNU6-245P-201ENST00000384020 107 ntBASIC2.72□□□□□ -1.97
HAPLN3Q96S86 RNU6-793P-201ENST00000384233 104 ntBASIC2.72□□□□□ -1.97
HAPLN3Q96S86 RNU6-21P-201ENST00000384710 107 ntBASIC2.72□□□□□ -1.97
HAPLN3Q96S86 MIR320B2-201ENST00000408479 138 ntBASIC2.72□□□□□ -1.97
HAPLN3Q96S86 RNU6-1199P-201ENST00000411249 104 ntBASIC2.72□□□□□ -1.97
HAPLN3Q96S86 PIGPP3-201ENST00000425307 415 ntBASIC2.72□□□□□ -1.97
HAPLN3Q96S86 RPL30P4-201ENST00000429309 333 ntBASIC2.72□□□□□ -1.97
HAPLN3Q96S86 MRPS10P1-201ENST00000448483 130 ntBASIC2.72□□□□□ -1.97
HAPLN3Q96S86 EEF1B2P7-201ENST00000451177 676 ntBASIC2.72□□□□□ -1.97
HAPLN3Q96S86 AC080013.2-201ENST00000460866 323 ntBASIC2.72□□□□□ -1.97
HAPLN3Q96S86 AC145146.1-201ENST00000496370 254 ntBASIC2.72□□□□□ -1.97
HAPLN3Q96S86 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.72□□□□□ -1.97
HAPLN3Q96S86 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.72□□□□□ -1.97
HAPLN3Q96S86 RPL21P9-201ENST00000556149 474 ntBASIC2.72□□□□□ -1.97
HAPLN3Q96S86 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.72□□□□□ -1.97
HAPLN3Q96S86 MIR3124-201ENST00000582636 67 ntBASIC2.72□□□□□ -1.97
HAPLN3Q96S86 AC011921.3-201ENST00000605540 361 ntBASIC2.72□□□□□ -1.97
HAPLN3Q96S86 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.72□□□□□ -1.97
HAPLN3Q96S86 AL590240.4-201ENST00000616908 390 ntBASIC2.72□□□□□ -1.97
HAPLN3Q96S86 FTX_2.1-201ENST00000618816 94 ntBASIC2.72□□□□□ -1.97
HAPLN3Q96S86 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.72□□□□□ -1.97
HAPLN3Q96S86 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.72□□□□□ -1.97
HAPLN3Q96S86 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
HAPLN3Q96S86 AL161431.1-201ENST00000618966 4205 ntBASIC2.72□□□□□ -1.97
HAPLN3Q96S86 Y_RNA.29-201ENST00000362570 113 ntBASIC2.71□□□□□ -1.98
HAPLN3Q96S86 Y_RNA.122-201ENST00000363331 96 ntBASIC2.71□□□□□ -1.98
HAPLN3Q96S86 Y_RNA.331-201ENST00000365267 102 ntBASIC2.71□□□□□ -1.98
HAPLN3Q96S86 RNY4P28-201ENST00000365281 93 ntBASIC2.71□□□□□ -1.98
HAPLN3Q96S86 RNU1-138P-201ENST00000384093 164 ntBASIC2.71□□□□□ -1.98
HAPLN3Q96S86 SNORA53-201ENST00000391141 249 ntBASIC2.71□□□□□ -1.98
HAPLN3Q96S86 AL603908.1-201ENST00000406098 201 ntBASIC2.71□□□□□ -1.98
HAPLN3Q96S86 RNU2-52P-201ENST00000410680 190 ntBASIC2.71□□□□□ -1.98
HAPLN3Q96S86 RAB28P5-201ENST00000427490 651 ntBASIC2.71□□□□□ -1.98
HAPLN3Q96S86 MTCO1P5-201ENST00000433573 344 ntBASIC2.71□□□□□ -1.98
HAPLN3Q96S86 AL109933.2-201ENST00000452651 260 ntBASIC2.71□□□□□ -1.98
HAPLN3Q96S86 RNU6-625P-201ENST00000459412 107 ntBASIC2.71□□□□□ -1.98
HAPLN3Q96S86 AC074133.1-201ENST00000515696 183 ntBASIC2.71□□□□□ -1.98
HAPLN3Q96S86 SNORD116-28-201ENST00000516123 91 ntBASIC2.71□□□□□ -1.98
HAPLN3Q96S86 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.71□□□□□ -1.98
HAPLN3Q96S86 AC104984.5-201ENST00000586878 94 ntBASIC2.71□□□□□ -1.98
HAPLN3Q96S86 SNRPGP20-201ENST00000604477 205 ntBASIC2.71□□□□□ -1.98
HAPLN3Q96S86 AC069294.1-201ENST00000608397 350 ntBASIC2.71□□□□□ -1.98
HAPLN3Q96S86 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
HAPLN3Q96S86 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.7□□□□□ -1.98
HAPLN3Q96S86 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HAPLN3Q96S86 MIR410-201ENST00000362222 80 ntBASIC2.7□□□□□ -1.98
HAPLN3Q96S86 snoU2_19.1-201ENST00000362361 80 ntBASIC2.7□□□□□ -1.98
HAPLN3Q96S86 RNU4-82P-201ENST00000362443 140 ntBASIC2.7□□□□□ -1.98
HAPLN3Q96S86 RNU1-62P-201ENST00000362599 164 ntBASIC2.7□□□□□ -1.98
HAPLN3Q96S86 Y_RNA.136-201ENST00000363444 102 ntBASIC2.7□□□□□ -1.98
HAPLN3Q96S86 Y_RNA.150-201ENST00000363562 102 ntBASIC2.7□□□□□ -1.98
HAPLN3Q96S86 Y_RNA.383-201ENST00000383855 97 ntBASIC2.7□□□□□ -1.98
HAPLN3Q96S86 RNU6-1062P-201ENST00000383908 107 ntBASIC2.7□□□□□ -1.98
HAPLN3Q96S86 Y_RNA.498-201ENST00000384460 102 ntBASIC2.7□□□□□ -1.98
HAPLN3Q96S86 SNORA46.1-201ENST00000391069 153 ntBASIC2.7□□□□□ -1.98
HAPLN3Q96S86 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.7□□□□□ -1.98
HAPLN3Q96S86 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.7□□□□□ -1.98
HAPLN3Q96S86 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.7□□□□□ -1.98
HAPLN3Q96S86 IFNA11P-201ENST00000446352 526 ntBASIC2.7□□□□□ -1.98
HAPLN3Q96S86 AC009237.7-201ENST00000447357 229 ntBASIC2.7□□□□□ -1.98
HAPLN3Q96S86 UQCRBP2-201ENST00000447827 297 ntBASIC2.7□□□□□ -1.98
HAPLN3Q96S86 AC108938.1-201ENST00000451204 136 ntBASIC2.7□□□□□ -1.98
HAPLN3Q96S86 AC091959.1-201ENST00000495857 238 ntBASIC2.7□□□□□ -1.98
HAPLN3Q96S86 RNA5SP402-201ENST00000517148 110 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms