Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.82□□□□□ -2.7
VPS13AQ96RL7 snoU13.27-201ENST00000459278 104 ntBASIC-1.82□□□□□ -2.7
VPS13AQ96RL7 RNU6-977P-201ENST00000516411 103 ntBASIC-1.82□□□□□ -2.7
VPS13AQ96RL7 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.82□□□□□ -2.7
VPS13AQ96RL7 MIR135A2-201ENST00000384854 100 ntBASIC-1.82□□□□□ -2.7
VPS13AQ96RL7 MIR588-201ENST00000384900 83 ntBASIC-1.82□□□□□ -2.7
VPS13AQ96RL7 AC008267.5-201ENST00000424928 265 ntBASIC-1.82□□□□□ -2.7
VPS13AQ96RL7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-1.82□□□□□ -2.7
VPS13AQ96RL7 AC132825.8-201ENST00000640783 297 ntBASIC-1.82□□□□□ -2.7
VPS13AQ96RL7 Y_RNA.336-201ENST00000365307 109 ntBASIC-1.83□□□□□ -2.7
VPS13AQ96RL7 MIR876-201ENST00000401147 81 ntBASIC-1.83□□□□□ -2.7
VPS13AQ96RL7 AC006548.1-201ENST00000427470 102 ntBASIC-1.83□□□□□ -2.7
VPS13AQ96RL7 ELOCP11-201ENST00000436690 332 ntBASIC-1.83□□□□□ -2.7
VPS13AQ96RL7 ELOCP16-201ENST00000444494 332 ntBASIC-1.83□□□□□ -2.7
VPS13AQ96RL7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-1.83□□□□□ -2.7
VPS13AQ96RL7 RNU7-134P-201ENST00000458997 64 ntBASIC-1.83□□□□□ -2.7
VPS13AQ96RL7 RNU7-34P-201ENST00000459394 64 ntBASIC-1.83□□□□□ -2.7
VPS13AQ96RL7 SNORA25.11-201ENST00000515935 105 ntBASIC-1.83□□□□□ -2.7
VPS13AQ96RL7 RNU6-91P-201ENST00000607774 107 ntBASIC-1.83□□□□□ -2.7
VPS13AQ96RL7 MIR7107-201ENST00000611489 80 ntBASIC-1.83□□□□□ -2.7
VPS13AQ96RL7 AC104820.1-201ENST00000624183 307 ntBASIC-1.83□□□□□ -2.7
VPS13AQ96RL7 CR381572.1-201ENST00000625098 102 ntBASIC-1.83□□□□□ -2.7
VPS13AQ96RL7 RNA5SP117-201ENST00000365294 118 ntBASIC-1.83□□□□□ -2.7
VPS13AQ96RL7 RNU6-1282P-201ENST00000516735 96 ntBASIC-1.83□□□□□ -2.7
VPS13AQ96RL7 RNU6-704P-201ENST00000364162 103 ntBASIC-1.84□□□□□ -2.7
VPS13AQ96RL7 SNORD114-17-201ENST00000364699 75 ntBASIC-1.84□□□□□ -2.7
VPS13AQ96RL7 RNU4-83P-201ENST00000410863 133 ntBASIC-1.84□□□□□ -2.7
VPS13AQ96RL7 AC022483.1-201ENST00000514020 567 ntBASIC-1.84□□□□□ -2.7
VPS13AQ96RL7 AC106754.2-201ENST00000623006 233 ntBASIC-1.84□□□□□ -2.7
VPS13AQ96RL7 SNORA4.2-201ENST00000365313 147 ntBASIC-1.84□□□□□ -2.7
VPS13AQ96RL7 MIR9-2-201ENST00000384838 87 ntBASIC-1.84□□□□□ -2.7
VPS13AQ96RL7 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC-1.84□□□□□ -2.7
VPS13AQ96RL7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-1.84□□□□□ -2.7
VPS13AQ96RL7 SNORD115-27-201ENST00000364430 82 ntBASIC-1.85□□□□□ -2.71
VPS13AQ96RL7 AL606845.1-201ENST00000404881 255 ntBASIC-1.85□□□□□ -2.71
VPS13AQ96RL7 USP9YP13-201ENST00000417797 480 ntBASIC-1.85□□□□□ -2.71
VPS13AQ96RL7 LAMTOR3P2-201ENST00000504479 232 ntBASIC-1.85□□□□□ -2.71
VPS13AQ96RL7 SNORA2.1-201ENST00000363089 137 ntBASIC-1.85□□□□□ -2.71
VPS13AQ96RL7 AC138749.4-201ENST00000563970 127 ntBASIC-1.85□□□□□ -2.71
VPS13AQ96RL7 MIR4804-201ENST00000581683 73 ntBASIC-1.85□□□□□ -2.71
VPS13AQ96RL7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC-1.85□□□□□ -2.71
VPS13AQ96RL7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-1.85□□□□□ -2.71
VPS13AQ96RL7 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.86□□□□□ -2.71
VPS13AQ96RL7 AL442663.2-201ENST00000554385 511 ntBASIC-1.86□□□□□ -2.71
VPS13AQ96RL7 MIR4752-201ENST00000579672 72 ntBASIC-1.86□□□□□ -2.71
VPS13AQ96RL7 AC080188.3-201ENST00000624842 748 ntBASIC-1.86□□□□□ -2.71
VPS13AQ96RL7 Y_RNA.2-201ENST00000362330 96 ntBASIC-1.86□□□□□ -2.71
VPS13AQ96RL7 RNU6-490P-201ENST00000362985 107 ntBASIC-1.86□□□□□ -2.71
VPS13AQ96RL7 MTCO1P17-201ENST00000411522 491 ntBASIC-1.86□□□□□ -2.71
VPS13AQ96RL7 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.86□□□□□ -2.71
VPS13AQ96RL7 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-1.86□□□□□ -2.71
VPS13AQ96RL7 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.86□□□□□ -2.71
VPS13AQ96RL7 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.87□□□□□ -2.71
VPS13AQ96RL7 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC-1.87□□□□□ -2.71
VPS13AQ96RL7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-1.87□□□□□ -2.71
VPS13AQ96RL7 SNORD18.2-201ENST00000459604 70 ntBASIC-1.87□□□□□ -2.71
VPS13AQ96RL7 CDR1-202ENST00000625883 1485 ntBASIC-1.87□□□□□ -2.71
VPS13AQ96RL7 RNU6-317P-201ENST00000384031 107 ntBASIC-1.87□□□□□ -2.71
VPS13AQ96RL7 SNORD19.2-201ENST00000516978 73 ntBASIC-1.87□□□□□ -2.71
VPS13AQ96RL7 RNU6-1249P-201ENST00000363237 111 ntBASIC-1.88□□□□□ -2.71
VPS13AQ96RL7 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.88□□□□□ -2.71
VPS13AQ96RL7 AL606923.1-201ENST00000406616 190 ntBASIC-1.88□□□□□ -2.71
VPS13AQ96RL7 AC073910.1-201ENST00000445047 438 ntBASIC-1.88□□□□□ -2.71
VPS13AQ96RL7 RNU7-73P-201ENST00000458743 63 ntBASIC-1.88□□□□□ -2.71
VPS13AQ96RL7 AC112771.1-201ENST00000463581 102 ntBASIC-1.88□□□□□ -2.71
VPS13AQ96RL7 AKIRIN2P1-201ENST00000505898 352 ntBASIC-1.88□□□□□ -2.71
VPS13AQ96RL7 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-1.88□□□□□ -2.71
VPS13AQ96RL7 RNU6-410P-201ENST00000517006 107 ntBASIC-1.88□□□□□ -2.71
VPS13AQ96RL7 AC010332.2-201ENST00000613083 1904 ntBASIC-1.88□□□□□ -2.71
VPS13AQ96RL7 AL512326.2-201ENST00000426359 151 ntBASIC-1.88□□□□□ -2.71
VPS13AQ96RL7 USP9YP14-201ENST00000430663 563 ntBASIC-1.88□□□□□ -2.71
VPS13AQ96RL7 POLR2KP2-201ENST00000438155 177 ntBASIC-1.88□□□□□ -2.71
VPS13AQ96RL7 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.88□□□□□ -2.71
VPS13AQ96RL7 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC-1.88□□□□□ -2.71
VPS13AQ96RL7 MIR1290-201ENST00000408735 78 ntBASIC-1.89□□□□□ -2.71
VPS13AQ96RL7 MTCO3P29-201ENST00000432119 779 ntBASIC-1.89□□□□□ -2.71
VPS13AQ96RL7 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC-1.89□□□□□ -2.71
VPS13AQ96RL7 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-1.89□□□□□ -2.71
VPS13AQ96RL7 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.89□□□□□ -2.71
VPS13AQ96RL7 AC060788.1-201ENST00000521318 469 ntBASIC-1.89□□□□□ -2.71
VPS13AQ96RL7 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.89□□□□□ -2.71
VPS13AQ96RL7 RNU6-1151P-201ENST00000384684 107 ntBASIC-1.89□□□□□ -2.71
VPS13AQ96RL7 RNY3P9-201ENST00000384727 106 ntBASIC-1.89□□□□□ -2.71
VPS13AQ96RL7 RNU6-293P-201ENST00000411259 106 ntBASIC-1.89□□□□□ -2.71
VPS13AQ96RL7 AC006366.1-201ENST00000422002 759 ntBASIC-1.89□□□□□ -2.71
VPS13AQ96RL7 AL929288.2-201ENST00000446368 407 ntBASIC-1.89□□□□□ -2.71
VPS13AQ96RL7 RNU6-475P-201ENST00000516073 104 ntBASIC-1.89□□□□□ -2.71
VPS13AQ96RL7 MIR3129-201ENST00000581095 76 ntBASIC-1.89□□□□□ -2.71
VPS13AQ96RL7 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.9□□□□□ -2.71
VPS13AQ96RL7 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-1.9□□□□□ -2.71
VPS13AQ96RL7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC-1.9□□□□□ -2.71
VPS13AQ96RL7 AC093259.1-201ENST00000509755 300 ntBASIC-1.9□□□□□ -2.71
VPS13AQ96RL7 SNORA25.16-201ENST00000516741 121 ntBASIC-1.9□□□□□ -2.71
VPS13AQ96RL7 AC087683.2-201ENST00000611384 326 ntBASIC-1.9□□□□□ -2.71
VPS13AQ96RL7 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.9□□□□□ -2.71
VPS13AQ96RL7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.9□□□□□ -2.71
VPS13AQ96RL7 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-1.9□□□□□ -2.71
VPS13AQ96RL7 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-1.9□□□□□ -2.71
VPS13AQ96RL7 MIR4771-2-201ENST00000577758 74 ntBASIC-1.9□□□□□ -2.71
VPS13AQ96RL7 MIR4756-201ENST00000577874 78 ntBASIC-1.9□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms