Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 AL138963.2-201ENST00000605137 226 ntBASIC2.6□□□□□ -1.99
VCPIP1Q96JH7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.6□□□□□ -1.99
VCPIP1Q96JH7 FTX_2.1-201ENST00000618816 94 ntBASIC2.6□□□□□ -1.99
VCPIP1Q96JH7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VCPIP1Q96JH7 AC080100.1-201ENST00000624239 5356 ntBASIC2.6□□□□□ -1.99
VCPIP1Q96JH7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VCPIP1Q96JH7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VCPIP1Q96JH7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.6□□□□□ -1.99
VCPIP1Q96JH7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.6□□□□□ -1.99
VCPIP1Q96JH7 Y_RNA.199-201ENST00000364014 102 ntBASIC2.59□□□□□ -1.99
VCPIP1Q96JH7 RNU6-21P-201ENST00000384710 107 ntBASIC2.59□□□□□ -1.99
VCPIP1Q96JH7 MIR329-1-201ENST00000385028 80 ntBASIC2.59□□□□□ -1.99
VCPIP1Q96JH7 AL359511.1-201ENST00000402970 211 ntBASIC2.59□□□□□ -1.99
VCPIP1Q96JH7 RN7SKP61-201ENST00000410642 295 ntBASIC2.59□□□□□ -1.99
VCPIP1Q96JH7 Y_RNA.793-201ENST00000411222 111 ntBASIC2.59□□□□□ -1.99
VCPIP1Q96JH7 AC104389.3-201ENST00000445629 235 ntBASIC2.59□□□□□ -1.99
VCPIP1Q96JH7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.59□□□□□ -1.99
VCPIP1Q96JH7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.59□□□□□ -1.99
VCPIP1Q96JH7 AC073901.1-201ENST00000462471 408 ntBASIC2.59□□□□□ -1.99
VCPIP1Q96JH7 RNA5SP320-201ENST00000516263 124 ntBASIC2.59□□□□□ -1.99
VCPIP1Q96JH7 RNU6-1198P-201ENST00000516904 67 ntBASIC2.59□□□□□ -1.99
VCPIP1Q96JH7 AC079598.5-201ENST00000547460 117 ntBASIC2.59□□□□□ -1.99
VCPIP1Q96JH7 MIR4524B-201ENST00000581569 115 ntBASIC2.59□□□□□ -1.99
VCPIP1Q96JH7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.59□□□□□ -1.99
VCPIP1Q96JH7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.59□□□□□ -1.99
VCPIP1Q96JH7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
VCPIP1Q96JH7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.59□□□□□ -2
VCPIP1Q96JH7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.58□□□□□ -2
VCPIP1Q96JH7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.58□□□□□ -2
VCPIP1Q96JH7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
VCPIP1Q96JH7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.58□□□□□ -2
VCPIP1Q96JH7 AC092268.1-201ENST00000342691 405 ntBASIC2.58□□□□□ -2
VCPIP1Q96JH7 Y_RNA.44-201ENST00000362676 108 ntBASIC2.58□□□□□ -2
VCPIP1Q96JH7 Y_RNA.76-201ENST00000362931 109 ntBASIC2.58□□□□□ -2
VCPIP1Q96JH7 SNORD114-19-201ENST00000363072 75 ntBASIC2.58□□□□□ -2
VCPIP1Q96JH7 RNU6-137P-201ENST00000363680 108 ntBASIC2.58□□□□□ -2
VCPIP1Q96JH7 RNU6-961P-201ENST00000363893 105 ntBASIC2.58□□□□□ -2
VCPIP1Q96JH7 RNU6-20P-201ENST00000384106 107 ntBASIC2.58□□□□□ -2
VCPIP1Q96JH7 SNORA67.4-201ENST00000384688 142 ntBASIC2.58□□□□□ -2
VCPIP1Q96JH7 Y_RNA.569-201ENST00000384749 103 ntBASIC2.58□□□□□ -2
VCPIP1Q96JH7 MIR518C-201ENST00000384822 101 ntBASIC2.58□□□□□ -2
VCPIP1Q96JH7 MIR218-1-201ENST00000384999 110 ntBASIC2.58□□□□□ -2
VCPIP1Q96JH7 RNA5SP181-201ENST00000410246 98 ntBASIC2.58□□□□□ -2
VCPIP1Q96JH7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.58□□□□□ -2
VCPIP1Q96JH7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.58□□□□□ -2
VCPIP1Q96JH7 AC078809.1-201ENST00000427601 140 ntBASIC2.58□□□□□ -2
VCPIP1Q96JH7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.58□□□□□ -2
VCPIP1Q96JH7 Y_RNA.644-201ENST00000459006 113 ntBASIC2.58□□□□□ -2
VCPIP1Q96JH7 RPL26P26-201ENST00000480251 434 ntBASIC2.58□□□□□ -2
VCPIP1Q96JH7 Y_RNA.674-201ENST00000516362 113 ntBASIC2.58□□□□□ -2
VCPIP1Q96JH7 RNU6-567P-201ENST00000516746 107 ntBASIC2.58□□□□□ -2
VCPIP1Q96JH7 RNU2-31P-201ENST00000516954 155 ntBASIC2.58□□□□□ -2
VCPIP1Q96JH7 AC021231.3-201ENST00000558497 370 ntBASIC2.58□□□□□ -2
VCPIP1Q96JH7 AC090616.3-201ENST00000582184 217 ntBASIC2.58□□□□□ -2
VCPIP1Q96JH7 MIR3199-1-201ENST00000582434 88 ntBASIC2.58□□□□□ -2
VCPIP1Q96JH7 MIR4769-201ENST00000584126 77 ntBASIC2.58□□□□□ -2
VCPIP1Q96JH7 AC037487.3-201ENST00000606668 112 ntBASIC2.58□□□□□ -2
VCPIP1Q96JH7 AC067747.1-201ENST00000608026 250 ntBASIC2.58□□□□□ -2
VCPIP1Q96JH7 MIR203B-201ENST00000636080 86 ntBASIC2.58□□□□□ -2
VCPIP1Q96JH7 AC080128.1-201ENST00000474389 1917 ntBASIC2.58□□□□□ -2
VCPIP1Q96JH7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
VCPIP1Q96JH7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.57□□□□□ -2
VCPIP1Q96JH7 RNU6-1010P-201ENST00000362757 107 ntBASIC2.57□□□□□ -2
VCPIP1Q96JH7 RNA5SP393-201ENST00000363423 117 ntBASIC2.57□□□□□ -2
VCPIP1Q96JH7 RNU6-1285P-201ENST00000363480 105 ntBASIC2.57□□□□□ -2
VCPIP1Q96JH7 Y_RNA.180-201ENST00000363867 113 ntBASIC2.57□□□□□ -2
VCPIP1Q96JH7 RNU6-461P-201ENST00000364195 107 ntBASIC2.57□□□□□ -2
VCPIP1Q96JH7 RNU6-740P-201ENST00000364734 105 ntBASIC2.57□□□□□ -2
VCPIP1Q96JH7 RNU6-326P-201ENST00000365480 107 ntBASIC2.57□□□□□ -2
VCPIP1Q96JH7 RNU1-138P-201ENST00000384093 164 ntBASIC2.57□□□□□ -2
VCPIP1Q96JH7 RNU6-1145P-201ENST00000384246 107 ntBASIC2.57□□□□□ -2
VCPIP1Q96JH7 MIR186-201ENST00000384988 86 ntBASIC2.57□□□□□ -2
VCPIP1Q96JH7 AC097463.2-201ENST00000421074 142 ntBASIC2.57□□□□□ -2
VCPIP1Q96JH7 RPL30P4-201ENST00000429309 333 ntBASIC2.57□□□□□ -2
VCPIP1Q96JH7 NDUFB4P10-201ENST00000452541 359 ntBASIC2.57□□□□□ -2
VCPIP1Q96JH7 SNORA40.9-201ENST00000515895 93 ntBASIC2.57□□□□□ -2
VCPIP1Q96JH7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.57□□□□□ -2
VCPIP1Q96JH7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.57□□□□□ -2
VCPIP1Q96JH7 AC024405.2-202ENST00000532731 184 ntBASIC2.57□□□□□ -2
VCPIP1Q96JH7 AK6P2-201ENST00000549020 471 ntBASIC2.57□□□□□ -2
VCPIP1Q96JH7 AC027176.1-201ENST00000560204 514 ntBASIC2.57□□□□□ -2
VCPIP1Q96JH7 AC105137.2-201ENST00000569073 466 ntBASIC2.57□□□□□ -2
VCPIP1Q96JH7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.57□□□□□ -2
VCPIP1Q96JH7 AC127459.3-201ENST00000624328 466 ntBASIC2.57□□□□□ -2
VCPIP1Q96JH7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.57□□□□□ -2
VCPIP1Q96JH7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.56□□□□□ -2
VCPIP1Q96JH7 RNU6-873P-201ENST00000363833 107 ntBASIC2.56□□□□□ -2
VCPIP1Q96JH7 RNU6-1175P-201ENST00000365200 107 ntBASIC2.56□□□□□ -2
VCPIP1Q96JH7 RNU6-886P-201ENST00000384319 105 ntBASIC2.56□□□□□ -2
VCPIP1Q96JH7 MIR549A-201ENST00000385268 96 ntBASIC2.56□□□□□ -2
VCPIP1Q96JH7 SNORA3.2-201ENST00000408221 125 ntBASIC2.56□□□□□ -2
VCPIP1Q96JH7 AC012306.1-201ENST00000423267 114 ntBASIC2.56□□□□□ -2
VCPIP1Q96JH7 AC019205.3-201ENST00000424573 156 ntBASIC2.56□□□□□ -2
VCPIP1Q96JH7 AL445687.1-201ENST00000439946 251 ntBASIC2.56□□□□□ -2
VCPIP1Q96JH7 MIR4423-201ENST00000580922 80 ntBASIC2.56□□□□□ -2
VCPIP1Q96JH7 AC008749.1-201ENST00000597650 306 ntBASIC2.56□□□□□ -2
VCPIP1Q96JH7 AL078605.1-201ENST00000603529 500 ntBASIC2.56□□□□□ -2
VCPIP1Q96JH7 AL356280.1-201ENST00000603614 379 ntBASIC2.56□□□□□ -2
VCPIP1Q96JH7 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.56□□□□□ -2
VCPIP1Q96JH7 MIR1291-201ENST00000627649 87 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms