Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.67□□□□□ -2.14
VPS33AQ96AX1 RNU6-281P-201ENST00000384212 103 ntBASIC1.67□□□□□ -2.14
VPS33AQ96AX1 RNA5SP213-201ENST00000391031 106 ntBASIC1.67□□□□□ -2.14
VPS33AQ96AX1 RNA5SP323-201ENST00000391094 133 ntBASIC1.67□□□□□ -2.14
VPS33AQ96AX1 MIR190B-201ENST00000401119 79 ntBASIC1.67□□□□□ -2.14
VPS33AQ96AX1 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS33AQ96AX1 MTCYBP10-201ENST00000424905 650 ntBASIC1.67□□□□□ -2.14
VPS33AQ96AX1 Y_RNA.670-201ENST00000516255 105 ntBASIC1.67□□□□□ -2.14
VPS33AQ96AX1 CYCSP23-201ENST00000519781 313 ntBASIC1.67□□□□□ -2.14
VPS33AQ96AX1 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS33AQ96AX1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.67□□□□□ -2.14
VPS33AQ96AX1 AC110588.1-201ENST00000559699 137 ntBASIC1.67□□□□□ -2.14
VPS33AQ96AX1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS33AQ96AX1 AC005899.2-201ENST00000584353 90 ntBASIC1.67□□□□□ -2.14
VPS33AQ96AX1 MZT1P2-201ENST00000604387 248 ntBASIC1.67□□□□□ -2.14
VPS33AQ96AX1 AC122108.2-201ENST00000611946 526 ntBASIC1.67□□□□□ -2.14
VPS33AQ96AX1 AL359075.3-201ENST00000613288 217 ntBASIC1.67□□□□□ -2.14
VPS33AQ96AX1 MTND5P35-201ENST00000557537 1720 ntBASIC1.66□□□□□ -2.14
VPS33AQ96AX1 AC092881.1-201ENST00000638218 2733 ntBASIC1.66□□□□□ -2.14
VPS33AQ96AX1 Y_RNA.106-201ENST00000363189 100 ntBASIC1.66□□□□□ -2.14
VPS33AQ96AX1 Y_RNA.248-201ENST00000364501 109 ntBASIC1.66□□□□□ -2.14
VPS33AQ96AX1 RNU4-42P-201ENST00000364738 142 ntBASIC1.66□□□□□ -2.14
VPS33AQ96AX1 RNA5SP363-201ENST00000365072 115 ntBASIC1.66□□□□□ -2.14
VPS33AQ96AX1 RNU1-78P-201ENST00000391248 165 ntBASIC1.66□□□□□ -2.14
VPS33AQ96AX1 Y_RNA.599-201ENST00000410489 109 ntBASIC1.66□□□□□ -2.14
VPS33AQ96AX1 COX6CP10-201ENST00000416832 224 ntBASIC1.66□□□□□ -2.14
VPS33AQ96AX1 TOMM22P2-201ENST00000430735 237 ntBASIC1.66□□□□□ -2.14
VPS33AQ96AX1 AC073910.1-201ENST00000445047 438 ntBASIC1.66□□□□□ -2.14
VPS33AQ96AX1 MTND4P18-201ENST00000447010 465 ntBASIC1.66□□□□□ -2.14
VPS33AQ96AX1 RNU1-142P-201ENST00000516682 145 ntBASIC1.66□□□□□ -2.14
VPS33AQ96AX1 RNU6-307P-201ENST00000516743 106 ntBASIC1.66□□□□□ -2.14
VPS33AQ96AX1 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.66□□□□□ -2.14
VPS33AQ96AX1 AC093023.1-201ENST00000547375 507 ntBASIC1.66□□□□□ -2.14
VPS33AQ96AX1 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.66□□□□□ -2.14
VPS33AQ96AX1 AC099654.5-201ENST00000636479 350 ntBASIC1.66□□□□□ -2.14
VPS33AQ96AX1 CASC19-280ENST00000642102 1351 ntBASIC1.66□□□□□ -2.14
VPS33AQ96AX1 AC100821.1-201ENST00000523153 2479 ntBASIC1.66□□□□□ -2.14
VPS33AQ96AX1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
VPS33AQ96AX1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
VPS33AQ96AX1 MTND5P16-201ENST00000460269 1703 ntBASIC1.66□□□□□ -2.14
VPS33AQ96AX1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.65□□□□□ -2.14
VPS33AQ96AX1 RNU6-222P-201ENST00000362438 107 ntBASIC1.65□□□□□ -2.15
VPS33AQ96AX1 Y_RNA.67-201ENST00000362870 100 ntBASIC1.65□□□□□ -2.15
VPS33AQ96AX1 Y_RNA.88-201ENST00000363029 99 ntBASIC1.65□□□□□ -2.15
VPS33AQ96AX1 RNY1P16-201ENST00000363063 111 ntBASIC1.65□□□□□ -2.15
VPS33AQ96AX1 Y_RNA.184-201ENST00000363884 108 ntBASIC1.65□□□□□ -2.15
VPS33AQ96AX1 Y_RNA.364-201ENST00000365532 101 ntBASIC1.65□□□□□ -2.15
VPS33AQ96AX1 RNU6-950P-201ENST00000384651 107 ntBASIC1.65□□□□□ -2.15
VPS33AQ96AX1 RNU6-997P-201ENST00000384725 107 ntBASIC1.65□□□□□ -2.15
VPS33AQ96AX1 RNA5SP467-201ENST00000391274 118 ntBASIC1.65□□□□□ -2.15
VPS33AQ96AX1 FGF7P8-201ENST00000402994 292 ntBASIC1.65□□□□□ -2.15
VPS33AQ96AX1 RN7SKP192-201ENST00000411291 327 ntBASIC1.65□□□□□ -2.15
VPS33AQ96AX1 AL161935.2-201ENST00000414627 60 ntBASIC1.65□□□□□ -2.15
VPS33AQ96AX1 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.65□□□□□ -2.15
VPS33AQ96AX1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.65□□□□□ -2.15
VPS33AQ96AX1 AC245517.4-201ENST00000448601 281 ntBASIC1.65□□□□□ -2.15
VPS33AQ96AX1 HSPE1P24-201ENST00000450782 238 ntBASIC1.65□□□□□ -2.15
VPS33AQ96AX1 RPS26P45-201ENST00000471748 340 ntBASIC1.65□□□□□ -2.15
VPS33AQ96AX1 RNU7-30P-201ENST00000516835 62 ntBASIC1.65□□□□□ -2.15
VPS33AQ96AX1 AL137100.2-201ENST00000555786 315 ntBASIC1.65□□□□□ -2.15
VPS33AQ96AX1 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.65□□□□□ -2.15
VPS33AQ96AX1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.65□□□□□ -2.15
VPS33AQ96AX1 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.65□□□□□ -2.15
VPS33AQ96AX1 AC009229.3-201ENST00000608056 282 ntBASIC1.65□□□□□ -2.15
VPS33AQ96AX1 uc_338.5-201ENST00000611839 155 ntBASIC1.65□□□□□ -2.15
VPS33AQ96AX1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.64□□□□□ -2.15
VPS33AQ96AX1 ICE2P2-201ENST00000483823 2787 ntBASIC1.64□□□□□ -2.15
VPS33AQ96AX1 MIR302D-201ENST00000362275 68 ntBASIC1.64□□□□□ -2.15
VPS33AQ96AX1 RNU6-845P-201ENST00000362578 103 ntBASIC1.64□□□□□ -2.15
VPS33AQ96AX1 Y_RNA.160-201ENST00000363677 92 ntBASIC1.64□□□□□ -2.15
VPS33AQ96AX1 Y_RNA.473-201ENST00000384333 102 ntBASIC1.64□□□□□ -2.15
VPS33AQ96AX1 EIF1P2-201ENST00000428233 350 ntBASIC1.64□□□□□ -2.15
VPS33AQ96AX1 MTND1P2-201ENST00000430604 821 ntBASIC1.64□□□□□ -2.15
VPS33AQ96AX1 UBE2V1P7-201ENST00000446395 340 ntBASIC1.64□□□□□ -2.15
VPS33AQ96AX1 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.64□□□□□ -2.15
VPS33AQ96AX1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.64□□□□□ -2.15
VPS33AQ96AX1 UBE2DNL-203ENST00000474922 222 ntBASIC1.64□□□□□ -2.15
VPS33AQ96AX1 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.64□□□□□ -2.15
VPS33AQ96AX1 APOOP3-201ENST00000536787 586 ntBASIC1.64□□□□□ -2.15
VPS33AQ96AX1 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.64□□□□□ -2.15
VPS33AQ96AX1 MIR4709-201ENST00000577272 72 ntBASIC1.64□□□□□ -2.15
VPS33AQ96AX1 PISRT1.1-201ENST00000616930 107 ntBASIC1.64□□□□□ -2.15
VPS33AQ96AX1 AC006435.5-201ENST00000624486 112 ntBASIC1.64□□□□□ -2.15
VPS33AQ96AX1 SNORD33-201ENST00000362761 85 ntBASIC1.63□□□□□ -2.15
VPS33AQ96AX1 AC010095.1-201ENST00000443543 144 ntBASIC1.63□□□□□ -2.15
VPS33AQ96AX1 MTND3P10-201ENST00000450967 341 ntBASIC1.63□□□□□ -2.15
VPS33AQ96AX1 AC082651.2-201ENST00000496833 166 ntBASIC1.63□□□□□ -2.15
VPS33AQ96AX1 AL163195.1-201ENST00000496941 348 ntBASIC1.63□□□□□ -2.15
VPS33AQ96AX1 HMGN1P12-201ENST00000499125 195 ntBASIC1.63□□□□□ -2.15
VPS33AQ96AX1 AC103851.1-201ENST00000506833 274 ntBASIC1.63□□□□□ -2.15
VPS33AQ96AX1 RNA5SP445-201ENST00000515889 115 ntBASIC1.63□□□□□ -2.15
VPS33AQ96AX1 Y_RNA.691-201ENST00000516611 103 ntBASIC1.63□□□□□ -2.15
VPS33AQ96AX1 AC091544.4-201ENST00000555268 342 ntBASIC1.63□□□□□ -2.15
VPS33AQ96AX1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.63□□□□□ -2.15
VPS33AQ96AX1 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.63□□□□□ -2.15
VPS33AQ96AX1 U6.108-201ENST00000637764 58 ntBASIC1.63□□□□□ -2.15
VPS33AQ96AX1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.63□□□□□ -2.15
VPS33AQ96AX1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
VPS33AQ96AX1 MIR194-1-201ENST00000384892 85 ntBASIC1.62□□□□□ -2.15
VPS33AQ96AX1 Y_RNA.595-201ENST00000410403 105 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 263.2 ms