Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.43□□□□□ -2.18
PTP4A1Q93096 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.43□□□□□ -2.18
PTP4A1Q93096 FO393415.2-201ENST00000480085 343 ntBASIC1.43□□□□□ -2.18
PTP4A1Q93096 RPL30P10-201ENST00000488148 337 ntBASIC1.43□□□□□ -2.18
PTP4A1Q93096 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.43□□□□□ -2.18
PTP4A1Q93096 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.43□□□□□ -2.18
PTP4A1Q93096 MIR3683-201ENST00000580847 82 ntBASIC1.43□□□□□ -2.18
PTP4A1Q93096 uc_338.5-201ENST00000611839 155 ntBASIC1.43□□□□□ -2.18
PTP4A1Q93096 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.43□□□□□ -2.18
PTP4A1Q93096 AC100810.6-201ENST00000638068 285 ntBASIC1.43□□□□□ -2.18
PTP4A1Q93096 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.42□□□□□ -2.18
PTP4A1Q93096 RNU6-727P-201ENST00000363592 107 ntBASIC1.42□□□□□ -2.18
PTP4A1Q93096 SNORD87-201ENST00000364849 89 ntBASIC1.42□□□□□ -2.18
PTP4A1Q93096 RNA5SP109-201ENST00000391010 116 ntBASIC1.42□□□□□ -2.18
PTP4A1Q93096 AL627390.1-201ENST00000396055 340 ntBASIC1.42□□□□□ -2.18
PTP4A1Q93096 RNU6-1186P-201ENST00000410429 97 ntBASIC1.42□□□□□ -2.18
PTP4A1Q93096 AC016907.1-201ENST00000419483 435 ntBASIC1.42□□□□□ -2.18
PTP4A1Q93096 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.42□□□□□ -2.18
PTP4A1Q93096 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.42□□□□□ -2.18
PTP4A1Q93096 PGBD4P5-201ENST00000445958 426 ntBASIC1.42□□□□□ -2.18
PTP4A1Q93096 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.42□□□□□ -2.18
PTP4A1Q93096 AC093303.1-201ENST00000514549 295 ntBASIC1.42□□□□□ -2.18
PTP4A1Q93096 RNU6-720P-201ENST00000516363 108 ntBASIC1.42□□□□□ -2.18
PTP4A1Q93096 Y_RNA.706-201ENST00000516933 99 ntBASIC1.42□□□□□ -2.18
PTP4A1Q93096 RNU6-273P-201ENST00000516937 96 ntBASIC1.42□□□□□ -2.18
PTP4A1Q93096 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.42□□□□□ -2.18
PTP4A1Q93096 AC004584.2-201ENST00000570407 410 ntBASIC1.42□□□□□ -2.18
PTP4A1Q93096 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.42□□□□□ -2.18
PTP4A1Q93096 AC100812.1-201ENST00000607622 580 ntBASIC1.42□□□□□ -2.18
PTP4A1Q93096 AC010999.1-201ENST00000611856 324 ntBASIC1.42□□□□□ -2.18
PTP4A1Q93096 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.42□□□□□ -2.18
PTP4A1Q93096 AC006026.1-201ENST00000444025 1803 ntBASIC1.41□□□□□ -2.18
PTP4A1Q93096 Y_RNA.184-201ENST00000363884 108 ntBASIC1.41□□□□□ -2.18
PTP4A1Q93096 Y_RNA.295-201ENST00000364918 102 ntBASIC1.41□□□□□ -2.18
PTP4A1Q93096 Y_RNA.415-201ENST00000384012 112 ntBASIC1.41□□□□□ -2.18
PTP4A1Q93096 RNU6-306P-201ENST00000384617 107 ntBASIC1.41□□□□□ -2.18
PTP4A1Q93096 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
PTP4A1Q93096 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.41□□□□□ -2.18
PTP4A1Q93096 CYCSP49-201ENST00000420810 319 ntBASIC1.41□□□□□ -2.18
PTP4A1Q93096 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.41□□□□□ -2.18
PTP4A1Q93096 AC091179.3-201ENST00000474761 144 ntBASIC1.41□□□□□ -2.18
PTP4A1Q93096 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.41□□□□□ -2.18
PTP4A1Q93096 CYCSP23-201ENST00000519781 313 ntBASIC1.41□□□□□ -2.18
PTP4A1Q93096 AL442163.3-201ENST00000554110 156 ntBASIC1.41□□□□□ -2.18
PTP4A1Q93096 TPRKBP2-201ENST00000565969 475 ntBASIC1.41□□□□□ -2.18
PTP4A1Q93096 MIR3942-201ENST00000585264 109 ntBASIC1.41□□□□□ -2.18
PTP4A1Q93096 AL162424.1-201ENST00000602325 221 ntBASIC1.41□□□□□ -2.18
PTP4A1Q93096 MIR8065-201ENST00000620577 100 ntBASIC1.41□□□□□ -2.18
PTP4A1Q93096 AC006435.5-201ENST00000624486 112 ntBASIC1.41□□□□□ -2.18
PTP4A1Q93096 MIR3662-201ENST00000637030 95 ntBASIC1.41□□□□□ -2.18
PTP4A1Q93096 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.41□□□□□ -2.18
PTP4A1Q93096 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
PTP4A1Q93096 MIR26B-201ENST00000362251 77 ntBASIC1.4□□□□□ -2.19
PTP4A1Q93096 SNORA25.8-201ENST00000364831 128 ntBASIC1.4□□□□□ -2.19
PTP4A1Q93096 Y_RNA.453-201ENST00000384223 109 ntBASIC1.4□□□□□ -2.19
PTP4A1Q93096 RNU6-1031P-201ENST00000384773 107 ntBASIC1.4□□□□□ -2.19
PTP4A1Q93096 MRPL42P3-201ENST00000401492 326 ntBASIC1.4□□□□□ -2.19
PTP4A1Q93096 RNU6-174P-201ENST00000410406 106 ntBASIC1.4□□□□□ -2.19
PTP4A1Q93096 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.4□□□□□ -2.19
PTP4A1Q93096 AC245047.3-201ENST00000429428 127 ntBASIC1.4□□□□□ -2.19
PTP4A1Q93096 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.4□□□□□ -2.19
PTP4A1Q93096 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.4□□□□□ -2.19
PTP4A1Q93096 MTCYBP18-201ENST00000501056 747 ntBASIC1.4□□□□□ -2.19
PTP4A1Q93096 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.4□□□□□ -2.19
PTP4A1Q93096 RNU7-99P-201ENST00000516271 62 ntBASIC1.4□□□□□ -2.19
PTP4A1Q93096 RNU6-566P-201ENST00000516790 107 ntBASIC1.4□□□□□ -2.19
PTP4A1Q93096 RNU6-548P-201ENST00000517083 115 ntBASIC1.4□□□□□ -2.19
PTP4A1Q93096 AL929325.1-201ENST00000603096 117 ntBASIC1.4□□□□□ -2.19
PTP4A1Q93096 U6.73-201ENST00000619194 103 ntBASIC1.4□□□□□ -2.19
PTP4A1Q93096 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.4□□□□□ -2.19
PTP4A1Q93096 RNU6-595P-201ENST00000363944 107 ntBASIC1.39□□□□□ -2.19
PTP4A1Q93096 Y_RNA.533-201ENST00000384596 114 ntBASIC1.39□□□□□ -2.19
PTP4A1Q93096 AL034345.1-201ENST00000407768 123 ntBASIC1.39□□□□□ -2.19
PTP4A1Q93096 TOMM22P2-201ENST00000430735 237 ntBASIC1.39□□□□□ -2.19
PTP4A1Q93096 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.39□□□□□ -2.19
PTP4A1Q93096 RNU6-1114P-201ENST00000516022 107 ntBASIC1.39□□□□□ -2.19
PTP4A1Q93096 Y_RNA.683-201ENST00000516508 93 ntBASIC1.39□□□□□ -2.19
PTP4A1Q93096 UBL5P4-201ENST00000562584 236 ntBASIC1.39□□□□□ -2.19
PTP4A1Q93096 MIR3684-201ENST00000579779 74 ntBASIC1.39□□□□□ -2.19
PTP4A1Q93096 MIR7974-201ENST00000615835 79 ntBASIC1.39□□□□□ -2.19
PTP4A1Q93096 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
PTP4A1Q93096 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
PTP4A1Q93096 Y_RNA.405-201ENST00000383979 100 ntBASIC1.38□□□□□ -2.19
PTP4A1Q93096 Y_RNA.451-201ENST00000384200 100 ntBASIC1.38□□□□□ -2.19
PTP4A1Q93096 Y_RNA.524-201ENST00000384564 100 ntBASIC1.38□□□□□ -2.19
PTP4A1Q93096 Y_RNA.554-201ENST00000384672 102 ntBASIC1.38□□□□□ -2.19
PTP4A1Q93096 Y_RNA.561-201ENST00000384694 100 ntBASIC1.38□□□□□ -2.19
PTP4A1Q93096 MIR320A-201ENST00000385302 82 ntBASIC1.38□□□□□ -2.19
PTP4A1Q93096 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.38□□□□□ -2.19
PTP4A1Q93096 SDAD1P3-201ENST00000427380 333 ntBASIC1.38□□□□□ -2.19
PTP4A1Q93096 USP9YP16-201ENST00000430287 407 ntBASIC1.38□□□□□ -2.19
PTP4A1Q93096 AL445305.1-201ENST00000432577 575 ntBASIC1.38□□□□□ -2.19
PTP4A1Q93096 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.38□□□□□ -2.19
PTP4A1Q93096 MTND4P18-201ENST00000447010 465 ntBASIC1.38□□□□□ -2.19
PTP4A1Q93096 USP9YP23-201ENST00000455085 407 ntBASIC1.38□□□□□ -2.19
PTP4A1Q93096 AP000870.1-201ENST00000472927 406 ntBASIC1.38□□□□□ -2.19
PTP4A1Q93096 RNU6-107P-201ENST00000516643 102 ntBASIC1.38□□□□□ -2.19
PTP4A1Q93096 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.38□□□□□ -2.19
PTP4A1Q93096 AL121579.1-201ENST00000555129 305 ntBASIC1.38□□□□□ -2.19
PTP4A1Q93096 AL160236.1-201ENST00000556317 195 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms