Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 RNU2-20P-201ENST00000410425 191 ntBASIC2.57□□□□□ -2
ATP2A3Q93084 RNU4-53P-201ENST00000410828 140 ntBASIC2.57□□□□□ -2
ATP2A3Q93084 RN7SKP192-201ENST00000411291 327 ntBASIC2.57□□□□□ -2
ATP2A3Q93084 AL135786.1-201ENST00000415892 214 ntBASIC2.57□□□□□ -2
ATP2A3Q93084 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.57□□□□□ -2
ATP2A3Q93084 AL445305.1-201ENST00000432577 575 ntBASIC2.57□□□□□ -2
ATP2A3Q93084 AC009238.1-201ENST00000442165 424 ntBASIC2.57□□□□□ -2
ATP2A3Q93084 AC009237.6-201ENST00000446969 424 ntBASIC2.57□□□□□ -2
ATP2A3Q93084 RNU1-41P-201ENST00000516161 162 ntBASIC2.57□□□□□ -2
ATP2A3Q93084 RNU1-48P-201ENST00000516400 162 ntBASIC2.57□□□□□ -2
ATP2A3Q93084 EIF4A1P12-201ENST00000551910 141 ntBASIC2.57□□□□□ -2
ATP2A3Q93084 AC012433.1-201ENST00000588916 398 ntBASIC2.57□□□□□ -2
ATP2A3Q93084 RPS29P30-201ENST00000600975 111 ntBASIC2.57□□□□□ -2
ATP2A3Q93084 AC011373.1-201ENST00000607270 237 ntBASIC2.57□□□□□ -2
ATP2A3Q93084 AC245884.12-201ENST00000615364 59 ntBASIC2.57□□□□□ -2
ATP2A3Q93084 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ATP2A3Q93084 ZNF271P-202ENST00000465539 1970 ntBASIC2.56□□□□□ -2
ATP2A3Q93084 RNA5SP289-201ENST00000362332 137 ntBASIC2.56□□□□□ -2
ATP2A3Q93084 RNA5SP361-201ENST00000362686 118 ntBASIC2.56□□□□□ -2
ATP2A3Q93084 RNU6-1301P-201ENST00000362724 104 ntBASIC2.56□□□□□ -2
ATP2A3Q93084 Y_RNA.84-201ENST00000363011 104 ntBASIC2.56□□□□□ -2
ATP2A3Q93084 RNU5F-3P-201ENST00000363767 117 ntBASIC2.56□□□□□ -2
ATP2A3Q93084 Y_RNA.183-201ENST00000363882 113 ntBASIC2.56□□□□□ -2
ATP2A3Q93084 RNU6-280P-201ENST00000364145 104 ntBASIC2.56□□□□□ -2
ATP2A3Q93084 Y_RNA.257-201ENST00000364596 102 ntBASIC2.56□□□□□ -2
ATP2A3Q93084 RNU6-318P-201ENST00000384283 103 ntBASIC2.56□□□□□ -2
ATP2A3Q93084 RNA5SP213-201ENST00000391031 106 ntBASIC2.56□□□□□ -2
ATP2A3Q93084 SNORA46.1-201ENST00000391069 153 ntBASIC2.56□□□□□ -2
ATP2A3Q93084 RNU6-159P-201ENST00000391080 106 ntBASIC2.56□□□□□ -2
ATP2A3Q93084 RNU1-139P-201ENST00000391307 165 ntBASIC2.56□□□□□ -2
ATP2A3Q93084 SDAD1P3-201ENST00000427380 333 ntBASIC2.56□□□□□ -2
ATP2A3Q93084 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.56□□□□□ -2
ATP2A3Q93084 Y_RNA.638-201ENST00000459374 113 ntBASIC2.56□□□□□ -2
ATP2A3Q93084 RN7SL636P-201ENST00000497504 294 ntBASIC2.56□□□□□ -2
ATP2A3Q93084 Y_RNA.673-201ENST00000516306 88 ntBASIC2.56□□□□□ -2
ATP2A3Q93084 AC022868.1-201ENST00000517767 391 ntBASIC2.56□□□□□ -2
ATP2A3Q93084 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.56□□□□□ -2
ATP2A3Q93084 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.56□□□□□ -2
ATP2A3Q93084 SDR42E1P4-201ENST00000620894 481 ntBASIC2.56□□□□□ -2
ATP2A3Q93084 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.56□□□□□ -2
ATP2A3Q93084 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ATP2A3Q93084 Y_RNA.16-201ENST00000362421 102 ntBASIC2.55□□□□□ -2
ATP2A3Q93084 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ATP2A3Q93084 RNY3P4-201ENST00000384428 101 ntBASIC2.55□□□□□ -2
ATP2A3Q93084 RNU6-102P-201ENST00000384485 104 ntBASIC2.55□□□□□ -2
ATP2A3Q93084 AL079342.1-201ENST00000401460 267 ntBASIC2.55□□□□□ -2
ATP2A3Q93084 WARS2P1-201ENST00000429678 537 ntBASIC2.55□□□□□ -2
ATP2A3Q93084 MTND4LP30-201ENST00000454092 297 ntBASIC2.55□□□□□ -2
ATP2A3Q93084 AC007215.1-201ENST00000464893 276 ntBASIC2.55□□□□□ -2
ATP2A3Q93084 AC234781.5-201ENST00000508429 271 ntBASIC2.55□□□□□ -2
ATP2A3Q93084 RNU6-586P-201ENST00000517265 104 ntBASIC2.55□□□□□ -2
ATP2A3Q93084 HSPE1P18-201ENST00000517602 280 ntBASIC2.55□□□□□ -2
ATP2A3Q93084 CYCSP26-201ENST00000534107 320 ntBASIC2.55□□□□□ -2
ATP2A3Q93084 MIR3126-201ENST00000577443 74 ntBASIC2.55□□□□□ -2
ATP2A3Q93084 MIR4446-201ENST00000578505 67 ntBASIC2.55□□□□□ -2
ATP2A3Q93084 MIR5695-201ENST00000579717 85 ntBASIC2.55□□□□□ -2
ATP2A3Q93084 MIR4300-201ENST00000581016 96 ntBASIC2.55□□□□□ -2
ATP2A3Q93084 SNRPGP20-201ENST00000604477 205 ntBASIC2.55□□□□□ -2
ATP2A3Q93084 AL137847.3-201ENST00000611521 109 ntBASIC2.55□□□□□ -2
ATP2A3Q93084 AC005296.1-201ENST00000616145 209 ntBASIC2.55□□□□□ -2
ATP2A3Q93084 MIR7843-201ENST00000622274 79 ntBASIC2.55□□□□□ -2
ATP2A3Q93084 ZNF204P-201ENST00000416749 2397 ntBASIC2.54□□□□□ -2
ATP2A3Q93084 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
ATP2A3Q93084 Y_RNA.143-201ENST00000363520 106 ntBASIC2.54□□□□□ -2
ATP2A3Q93084 RNU6-879P-201ENST00000364328 108 ntBASIC2.54□□□□□ -2
ATP2A3Q93084 RNU1-138P-201ENST00000384093 164 ntBASIC2.54□□□□□ -2
ATP2A3Q93084 MIR561-201ENST00000385216 97 ntBASIC2.54□□□□□ -2
ATP2A3Q93084 RNA5SP425-201ENST00000410336 112 ntBASIC2.54□□□□□ -2
ATP2A3Q93084 RNU6-1203P-201ENST00000410703 110 ntBASIC2.54□□□□□ -2
ATP2A3Q93084 Z98949.2-201ENST00000440996 144 ntBASIC2.54□□□□□ -2
ATP2A3Q93084 TRBVB-201ENST00000477100 408 ntBASIC2.54□□□□□ -2
ATP2A3Q93084 HMGB3P17-201ENST00000504195 649 ntBASIC2.54□□□□□ -2
ATP2A3Q93084 RNU6-1012P-201ENST00000516606 109 ntBASIC2.54□□□□□ -2
ATP2A3Q93084 AC026470.2-201ENST00000561492 181 ntBASIC2.54□□□□□ -2
ATP2A3Q93084 UBL5P4-201ENST00000562584 236 ntBASIC2.54□□□□□ -2
ATP2A3Q93084 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
ATP2A3Q93084 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.54□□□□□ -2
ATP2A3Q93084 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.54□□□□□ -2
ATP2A3Q93084 BX322639.1-202ENST00000423987 2213 ntBASIC2.54□□□□□ -2
ATP2A3Q93084 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.54□□□□□ -2
ATP2A3Q93084 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.54□□□□□ -2
ATP2A3Q93084 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
ATP2A3Q93084 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
ATP2A3Q93084 RNU1-23P-201ENST00000363361 144 ntBASIC2.53□□□□□ -2
ATP2A3Q93084 RNA5SP456-201ENST00000364002 114 ntBASIC2.53□□□□□ -2
ATP2A3Q93084 Y_RNA.237-201ENST00000364439 102 ntBASIC2.53□□□□□ -2
ATP2A3Q93084 Y_RNA.539-201ENST00000384635 107 ntBASIC2.53□□□□□ -2
ATP2A3Q93084 MIR10B-201ENST00000385011 110 ntBASIC2.53□□□□□ -2
ATP2A3Q93084 MIR95-201ENST00000385072 81 ntBASIC2.53□□□□□ -2
ATP2A3Q93084 SNORD115-46-201ENST00000390982 71 ntBASIC2.53□□□□□ -2
ATP2A3Q93084 Y_RNA.597-201ENST00000410463 100 ntBASIC2.53□□□□□ -2
ATP2A3Q93084 RNA5SP270-201ENST00000411361 118 ntBASIC2.53□□□□□ -2
ATP2A3Q93084 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.53□□□□□ -2
ATP2A3Q93084 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.53□□□□□ -2
ATP2A3Q93084 EIF1P2-201ENST00000428233 350 ntBASIC2.53□□□□□ -2
ATP2A3Q93084 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.53□□□□□ -2
ATP2A3Q93084 AC010095.1-201ENST00000443543 144 ntBASIC2.53□□□□□ -2
ATP2A3Q93084 AC096638.1-201ENST00000444678 216 ntBASIC2.53□□□□□ -2
ATP2A3Q93084 SNORA4.4-201ENST00000515921 135 ntBASIC2.53□□□□□ -2
ATP2A3Q93084 RNU6-1023P-201ENST00000516137 106 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms