Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 RPS23P5-201ENST00000495419 428 ntBASIC2.4□□□□□ -2.03
VPS52Q8N1B4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.4□□□□□ -2.03
VPS52Q8N1B4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS52Q8N1B4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.4□□□□□ -2.03
VPS52Q8N1B4 RNU6-965P-201ENST00000516721 96 ntBASIC2.4□□□□□ -2.03
VPS52Q8N1B4 RNU6-1137P-201ENST00000517073 99 ntBASIC2.4□□□□□ -2.03
VPS52Q8N1B4 NDUFA5P6-201ENST00000542110 379 ntBASIC2.4□□□□□ -2.03
VPS52Q8N1B4 HSBP1P1-201ENST00000555205 166 ntBASIC2.4□□□□□ -2.03
VPS52Q8N1B4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS52Q8N1B4 AC008873.1-201ENST00000625051 138 ntBASIC2.4□□□□□ -2.03
VPS52Q8N1B4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
VPS52Q8N1B4 AP006437.1-201ENST00000641440 3685 ntBASIC2.39□□□□□ -2.03
VPS52Q8N1B4 RNU6-879P-201ENST00000364328 108 ntBASIC2.39□□□□□ -2.03
VPS52Q8N1B4 SNORA67.3-201ENST00000384366 140 ntBASIC2.39□□□□□ -2.03
VPS52Q8N1B4 RNU6-1160P-201ENST00000384546 104 ntBASIC2.39□□□□□ -2.03
VPS52Q8N1B4 SNORD23.1-201ENST00000408212 104 ntBASIC2.39□□□□□ -2.03
VPS52Q8N1B4 RNA5SP504-201ENST00000410676 117 ntBASIC2.39□□□□□ -2.03
VPS52Q8N1B4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS52Q8N1B4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS52Q8N1B4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS52Q8N1B4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS52Q8N1B4 ATP5EP1-201ENST00000510257 156 ntBASIC2.39□□□□□ -2.03
VPS52Q8N1B4 Y_RNA.683-201ENST00000516508 93 ntBASIC2.39□□□□□ -2.03
VPS52Q8N1B4 RNU5F-4P-201ENST00000516581 114 ntBASIC2.39□□□□□ -2.03
VPS52Q8N1B4 RNU6-1012P-201ENST00000516606 109 ntBASIC2.39□□□□□ -2.03
VPS52Q8N1B4 Y_RNA.721-201ENST00000517207 102 ntBASIC2.39□□□□□ -2.03
VPS52Q8N1B4 CYCSP23-201ENST00000519781 313 ntBASIC2.39□□□□□ -2.03
VPS52Q8N1B4 AC022616.4-201ENST00000522985 181 ntBASIC2.39□□□□□ -2.03
VPS52Q8N1B4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS52Q8N1B4 AC006504.6-201ENST00000590142 199 ntBASIC2.39□□□□□ -2.03
VPS52Q8N1B4 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.39□□□□□ -2.03
VPS52Q8N1B4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.38□□□□□ -2.03
VPS52Q8N1B4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
VPS52Q8N1B4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
VPS52Q8N1B4 Y_RNA.179-201ENST00000363844 90 ntBASIC2.38□□□□□ -2.03
VPS52Q8N1B4 SNORA63C-201ENST00000364578 129 ntBASIC2.38□□□□□ -2.03
VPS52Q8N1B4 SNORD14.1-201ENST00000365609 90 ntBASIC2.38□□□□□ -2.03
VPS52Q8N1B4 RNU6-708P-201ENST00000384217 107 ntBASIC2.38□□□□□ -2.03
VPS52Q8N1B4 RNU6-823P-201ENST00000391042 103 ntBASIC2.38□□□□□ -2.03
VPS52Q8N1B4 SNORA11.4-201ENST00000408823 129 ntBASIC2.38□□□□□ -2.03
VPS52Q8N1B4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.38□□□□□ -2.03
VPS52Q8N1B4 MIR514B-201ENST00000516774 80 ntBASIC2.38□□□□□ -2.03
VPS52Q8N1B4 AC034114.1-201ENST00000520293 285 ntBASIC2.38□□□□□ -2.03
VPS52Q8N1B4 AC040926.1-201ENST00000530195 238 ntBASIC2.38□□□□□ -2.03
VPS52Q8N1B4 MZT1P2-201ENST00000604387 248 ntBASIC2.38□□□□□ -2.03
VPS52Q8N1B4 SNORD14A-201ENST00000606526 91 ntBASIC2.38□□□□□ -2.03
VPS52Q8N1B4 SNORD11B-201ENST00000607707 90 ntBASIC2.38□□□□□ -2.03
VPS52Q8N1B4 MIR6766-201ENST00000622641 72 ntBASIC2.38□□□□□ -2.03
VPS52Q8N1B4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
VPS52Q8N1B4 MIR219B-201ENST00000637023 88 ntBASIC2.38□□□□□ -2.03
VPS52Q8N1B4 ZNF720P1-201ENST00000562403 1939 ntBASIC2.38□□□□□ -2.03
VPS52Q8N1B4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
VPS52Q8N1B4 MTND5P35-201ENST00000557537 1720 ntBASIC2.37□□□□□ -2.03
VPS52Q8N1B4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
VPS52Q8N1B4 RNU6-738P-201ENST00000384531 106 ntBASIC2.37□□□□□ -2.03
VPS52Q8N1B4 MIR606-201ENST00000384851 96 ntBASIC2.37□□□□□ -2.03
VPS52Q8N1B4 RNU6-985P-201ENST00000410182 104 ntBASIC2.37□□□□□ -2.03
VPS52Q8N1B4 SDAD1P3-201ENST00000427380 333 ntBASIC2.37□□□□□ -2.03
VPS52Q8N1B4 AC009238.1-201ENST00000442165 424 ntBASIC2.37□□□□□ -2.03
VPS52Q8N1B4 AC009237.6-201ENST00000446969 424 ntBASIC2.37□□□□□ -2.03
VPS52Q8N1B4 AC010469.2-201ENST00000496412 480 ntBASIC2.37□□□□□ -2.03
VPS52Q8N1B4 RNU6-667P-201ENST00000517186 102 ntBASIC2.37□□□□□ -2.03
VPS52Q8N1B4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.37□□□□□ -2.03
VPS52Q8N1B4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.37□□□□□ -2.03
VPS52Q8N1B4 AC010205.1-201ENST00000616668 449 ntBASIC2.37□□□□□ -2.03
VPS52Q8N1B4 AL162373.1-201ENST00000620433 407 ntBASIC2.37□□□□□ -2.03
VPS52Q8N1B4 AC068205.3-201ENST00000636385 468 ntBASIC2.37□□□□□ -2.03
VPS52Q8N1B4 U6.92-201ENST00000636464 89 ntBASIC2.37□□□□□ -2.03
VPS52Q8N1B4 RNU4-50P-201ENST00000364361 141 ntBASIC2.36□□□□□ -2.03
VPS52Q8N1B4 SNORD31B-201ENST00000364977 69 ntBASIC2.36□□□□□ -2.03
VPS52Q8N1B4 Y_RNA.424-201ENST00000384063 103 ntBASIC2.36□□□□□ -2.03
VPS52Q8N1B4 Y_RNA.455-201ENST00000384230 98 ntBASIC2.36□□□□□ -2.03
VPS52Q8N1B4 MIR586-201ENST00000385035 97 ntBASIC2.36□□□□□ -2.03
VPS52Q8N1B4 RNU6-482P-201ENST00000391068 107 ntBASIC2.36□□□□□ -2.03
VPS52Q8N1B4 SNORD78.2-201ENST00000391076 69 ntBASIC2.36□□□□□ -2.03
VPS52Q8N1B4 MIR300-201ENST00000401138 83 ntBASIC2.36□□□□□ -2.03
VPS52Q8N1B4 AL023284.1-201ENST00000403956 276 ntBASIC2.36□□□□□ -2.03
VPS52Q8N1B4 MRPL35P1-201ENST00000404272 572 ntBASIC2.36□□□□□ -2.03
VPS52Q8N1B4 AL357139.1-201ENST00000407792 426 ntBASIC2.36□□□□□ -2.03
VPS52Q8N1B4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS52Q8N1B4 HMGN2P18-201ENST00000450680 270 ntBASIC2.36□□□□□ -2.03
VPS52Q8N1B4 AC016925.1-201ENST00000458303 298 ntBASIC2.36□□□□□ -2.03
VPS52Q8N1B4 RNA5SP233-201ENST00000459153 113 ntBASIC2.36□□□□□ -2.03
VPS52Q8N1B4 RNU7-14P-201ENST00000459331 62 ntBASIC2.36□□□□□ -2.03
VPS52Q8N1B4 AC074133.1-201ENST00000515696 183 ntBASIC2.36□□□□□ -2.03
VPS52Q8N1B4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS52Q8N1B4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
VPS52Q8N1B4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
VPS52Q8N1B4 AC007336.1-201ENST00000576365 3828 ntBASIC2.35□□□□□ -2.03
VPS52Q8N1B4 AL596028.1-201ENST00000326971 197 ntBASIC2.35□□□□□ -2.03
VPS52Q8N1B4 RNA5SP99-201ENST00000364020 114 ntBASIC2.35□□□□□ -2.03
VPS52Q8N1B4 Y_RNA.332-201ENST00000365271 113 ntBASIC2.35□□□□□ -2.03
VPS52Q8N1B4 SNORA63.7-201ENST00000365579 123 ntBASIC2.35□□□□□ -2.03
VPS52Q8N1B4 RNU1-148P-201ENST00000384472 162 ntBASIC2.35□□□□□ -2.03
VPS52Q8N1B4 Y_RNA.595-201ENST00000410403 105 ntBASIC2.35□□□□□ -2.03
VPS52Q8N1B4 SNORD12B-201ENST00000410433 91 ntBASIC2.35□□□□□ -2.03
VPS52Q8N1B4 RPL26P26-201ENST00000480251 434 ntBASIC2.35□□□□□ -2.03
VPS52Q8N1B4 RPS27P21-201ENST00000486977 252 ntBASIC2.35□□□□□ -2.03
VPS52Q8N1B4 AC079804.2-201ENST00000490376 200 ntBASIC2.35□□□□□ -2.03
VPS52Q8N1B4 AC093259.1-201ENST00000509755 300 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms