Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC71Q8IV32 AL590240.4-201ENST00000616908 390 ntBASIC1.65□□□□□ -2.15
CCDC71Q8IV32 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CCDC71Q8IV32 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CCDC71Q8IV32 RNU6-457P-201ENST00000363999 107 ntBASIC1.64□□□□□ -2.15
CCDC71Q8IV32 Y_RNA.364-201ENST00000365532 101 ntBASIC1.64□□□□□ -2.15
CCDC71Q8IV32 Y_RNA.384-201ENST00000383909 102 ntBASIC1.64□□□□□ -2.15
CCDC71Q8IV32 RNU6-1297P-201ENST00000384415 104 ntBASIC1.64□□□□□ -2.15
CCDC71Q8IV32 RNU6-310P-201ENST00000384655 107 ntBASIC1.64□□□□□ -2.15
CCDC71Q8IV32 MIR597-201ENST00000384968 97 ntBASIC1.64□□□□□ -2.15
CCDC71Q8IV32 MIR10B-201ENST00000385011 110 ntBASIC1.64□□□□□ -2.15
CCDC71Q8IV32 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
CCDC71Q8IV32 SNORA75.6-201ENST00000391318 127 ntBASIC1.64□□□□□ -2.15
CCDC71Q8IV32 MTCYBP4-201ENST00000401524 249 ntBASIC1.64□□□□□ -2.15
CCDC71Q8IV32 Y_RNA.646-201ENST00000410980 101 ntBASIC1.64□□□□□ -2.15
CCDC71Q8IV32 AC096920.1-201ENST00000423991 241 ntBASIC1.64□□□□□ -2.15
CCDC71Q8IV32 MTND3P23-201ENST00000431980 347 ntBASIC1.64□□□□□ -2.15
CCDC71Q8IV32 AL353997.1-201ENST00000432936 108 ntBASIC1.64□□□□□ -2.15
CCDC71Q8IV32 AL353689.1-201ENST00000438895 199 ntBASIC1.64□□□□□ -2.15
CCDC71Q8IV32 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC71Q8IV32 RPL23AP3-201ENST00000453844 468 ntBASIC1.64□□□□□ -2.15
CCDC71Q8IV32 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.64□□□□□ -2.15
CCDC71Q8IV32 AC010531.2-201ENST00000465012 153 ntBASIC1.64□□□□□ -2.15
CCDC71Q8IV32 HMGN2P9-201ENST00000476875 229 ntBASIC1.64□□□□□ -2.15
CCDC71Q8IV32 RNU6-1114P-201ENST00000516022 107 ntBASIC1.64□□□□□ -2.15
CCDC71Q8IV32 RNU6-948P-201ENST00000516374 107 ntBASIC1.64□□□□□ -2.15
CCDC71Q8IV32 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC71Q8IV32 UBL5P4-201ENST00000562584 236 ntBASIC1.64□□□□□ -2.15
CCDC71Q8IV32 FRG2DP-202ENST00000566967 323 ntBASIC1.64□□□□□ -2.15
CCDC71Q8IV32 MIR4299-201ENST00000577899 72 ntBASIC1.64□□□□□ -2.15
CCDC71Q8IV32 AC005034.5-201ENST00000604219 466 ntBASIC1.64□□□□□ -2.15
CCDC71Q8IV32 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.64□□□□□ -2.15
CCDC71Q8IV32 AC008873.1-201ENST00000625051 138 ntBASIC1.64□□□□□ -2.15
CCDC71Q8IV32 ZNF702P-202ENST00000434269 1966 ntBASIC1.64□□□□□ -2.15
CCDC71Q8IV32 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.64□□□□□ -2.15
CCDC71Q8IV32 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CCDC71Q8IV32 Y_RNA.70-201ENST00000362886 110 ntBASIC1.63□□□□□ -2.15
CCDC71Q8IV32 Y_RNA.106-201ENST00000363189 100 ntBASIC1.63□□□□□ -2.15
CCDC71Q8IV32 RNU6-873P-201ENST00000363833 107 ntBASIC1.63□□□□□ -2.15
CCDC71Q8IV32 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC71Q8IV32 RNU6-281P-201ENST00000384212 103 ntBASIC1.63□□□□□ -2.15
CCDC71Q8IV32 RNU6-975P-201ENST00000384296 105 ntBASIC1.63□□□□□ -2.15
CCDC71Q8IV32 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.63□□□□□ -2.15
CCDC71Q8IV32 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC71Q8IV32 RPL23AP50-201ENST00000434149 455 ntBASIC1.63□□□□□ -2.15
CCDC71Q8IV32 AC114982.1-201ENST00000469402 321 ntBASIC1.63□□□□□ -2.15
CCDC71Q8IV32 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.63□□□□□ -2.15
CCDC71Q8IV32 RNU6-1053P-201ENST00000515930 101 ntBASIC1.63□□□□□ -2.15
CCDC71Q8IV32 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.63□□□□□ -2.15
CCDC71Q8IV32 AP005660.1-201ENST00000522972 293 ntBASIC1.63□□□□□ -2.15
CCDC71Q8IV32 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC71Q8IV32 MIR4498-201ENST00000577599 66 ntBASIC1.63□□□□□ -2.15
CCDC71Q8IV32 CYP2C61P-201ENST00000604072 290 ntBASIC1.63□□□□□ -2.15
CCDC71Q8IV32 SNORD11B-201ENST00000607707 90 ntBASIC1.63□□□□□ -2.15
CCDC71Q8IV32 U1.36-201ENST00000620684 176 ntBASIC1.63□□□□□ -2.15
CCDC71Q8IV32 MTND5P16-201ENST00000460269 1703 ntBASIC1.63□□□□□ -2.15
CCDC71Q8IV32 RNU6-1305P-201ENST00000364353 104 ntBASIC1.62□□□□□ -2.15
CCDC71Q8IV32 RNU4-42P-201ENST00000364738 142 ntBASIC1.62□□□□□ -2.15
CCDC71Q8IV32 RNA5SP363-201ENST00000365072 115 ntBASIC1.62□□□□□ -2.15
CCDC71Q8IV32 RNU6-418P-201ENST00000384035 107 ntBASIC1.62□□□□□ -2.15
CCDC71Q8IV32 RNU6-793P-201ENST00000384233 104 ntBASIC1.62□□□□□ -2.15
CCDC71Q8IV32 RNA5SP504-201ENST00000410676 117 ntBASIC1.62□□□□□ -2.15
CCDC71Q8IV32 RNA5SP247-201ENST00000411181 105 ntBASIC1.62□□□□□ -2.15
CCDC71Q8IV32 AL158823.1-201ENST00000418441 478 ntBASIC1.62□□□□□ -2.15
CCDC71Q8IV32 AC007098.1-201ENST00000420122 367 ntBASIC1.62□□□□□ -2.15
CCDC71Q8IV32 MTND4LP11-201ENST00000422184 280 ntBASIC1.62□□□□□ -2.15
CCDC71Q8IV32 USP9YP16-201ENST00000430287 407 ntBASIC1.62□□□□□ -2.15
CCDC71Q8IV32 AC074290.1-201ENST00000448883 135 ntBASIC1.62□□□□□ -2.15
CCDC71Q8IV32 NDUFB4P10-201ENST00000452541 359 ntBASIC1.62□□□□□ -2.15
CCDC71Q8IV32 USP9YP23-201ENST00000455085 407 ntBASIC1.62□□□□□ -2.15
CCDC71Q8IV32 Y_RNA.653-201ENST00000459091 95 ntBASIC1.62□□□□□ -2.15
CCDC71Q8IV32 RNU6-507P-201ENST00000516045 100 ntBASIC1.62□□□□□ -2.15
CCDC71Q8IV32 RNU6-856P-201ENST00000516959 98 ntBASIC1.62□□□□□ -2.15
CCDC71Q8IV32 SUB1P3-201ENST00000564581 315 ntBASIC1.62□□□□□ -2.15
CCDC71Q8IV32 AC090617.3-201ENST00000573670 475 ntBASIC1.62□□□□□ -2.15
CCDC71Q8IV32 AC005786.1-201ENST00000588553 154 ntBASIC1.62□□□□□ -2.15
CCDC71Q8IV32 MIR1302-1-201ENST00000637932 143 ntBASIC1.62□□□□□ -2.15
CCDC71Q8IV32 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CCDC71Q8IV32 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CCDC71Q8IV32 MIR378A-201ENST00000362177 66 ntBASIC1.61□□□□□ -2.15
CCDC71Q8IV32 Y_RNA.179-201ENST00000363844 90 ntBASIC1.61□□□□□ -2.15
CCDC71Q8IV32 RNU6-1235P-201ENST00000384559 107 ntBASIC1.61□□□□□ -2.15
CCDC71Q8IV32 RNU6-997P-201ENST00000384725 107 ntBASIC1.61□□□□□ -2.15
CCDC71Q8IV32 RNA5SP212-201ENST00000391223 107 ntBASIC1.61□□□□□ -2.15
CCDC71Q8IV32 EIF1P2-201ENST00000428233 350 ntBASIC1.61□□□□□ -2.15
CCDC71Q8IV32 ELOCP24-201ENST00000456370 334 ntBASIC1.61□□□□□ -2.15
CCDC71Q8IV32 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC71Q8IV32 RNU6-498P-201ENST00000459468 107 ntBASIC1.61□□□□□ -2.15
CCDC71Q8IV32 AC091179.3-201ENST00000474761 144 ntBASIC1.61□□□□□ -2.15
CCDC71Q8IV32 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.61□□□□□ -2.15
CCDC71Q8IV32 RNU6-470P-201ENST00000515954 104 ntBASIC1.61□□□□□ -2.15
CCDC71Q8IV32 RNU6-264P-201ENST00000517134 104 ntBASIC1.61□□□□□ -2.15
CCDC71Q8IV32 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.61□□□□□ -2.15
CCDC71Q8IV32 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC71Q8IV32 CBX3P4-201ENST00000538909 354 ntBASIC1.61□□□□□ -2.15
CCDC71Q8IV32 AC004584.2-201ENST00000570407 410 ntBASIC1.61□□□□□ -2.15
CCDC71Q8IV32 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.61□□□□□ -2.15
CCDC71Q8IV32 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC71Q8IV32 LARP7P1-201ENST00000605576 316 ntBASIC1.61□□□□□ -2.15
CCDC71Q8IV32 AC133104.2-201ENST00000615272 193 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms