Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 AC063976.3-201ENST00000426849 329 ntBASIC3.59□□□□□ -1.83
USP48Q86UV5 AC080013.2-201ENST00000460866 323 ntBASIC3.59□□□□□ -1.83
USP48Q86UV5 RN7SL20P-201ENST00000488827 297 ntBASIC3.59□□□□□ -1.83
USP48Q86UV5 RNU5F-4P-201ENST00000516581 114 ntBASIC3.59□□□□□ -1.83
USP48Q86UV5 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.59□□□□□ -1.83
USP48Q86UV5 MIR3133-201ENST00000583157 78 ntBASIC3.59□□□□□ -1.83
USP48Q86UV5 AC008749.1-201ENST00000597650 306 ntBASIC3.59□□□□□ -1.83
USP48Q86UV5 AC004467.1-201ENST00000615678 330 ntBASIC3.59□□□□□ -1.83
USP48Q86UV5 AL590240.4-201ENST00000616908 390 ntBASIC3.59□□□□□ -1.83
USP48Q86UV5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
USP48Q86UV5 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.59□□□□□ -1.83
USP48Q86UV5 AC138915.1-201ENST00000565427 1685 ntBASIC3.59□□□□□ -1.84
USP48Q86UV5 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.58□□□□□ -1.84
USP48Q86UV5 Y_RNA.275-201ENST00000364726 110 ntBASIC3.58□□□□□ -1.84
USP48Q86UV5 SNORD87-201ENST00000364849 89 ntBASIC3.58□□□□□ -1.84
USP48Q86UV5 RNU6-662P-201ENST00000384253 104 ntBASIC3.58□□□□□ -1.84
USP48Q86UV5 RNU6-125P-201ENST00000384505 107 ntBASIC3.58□□□□□ -1.84
USP48Q86UV5 RNU2-52P-201ENST00000410680 190 ntBASIC3.58□□□□□ -1.84
USP48Q86UV5 RPL23AP3-201ENST00000453844 468 ntBASIC3.58□□□□□ -1.84
USP48Q86UV5 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.58□□□□□ -1.84
USP48Q86UV5 AP002392.1-201ENST00000537692 208 ntBASIC3.58□□□□□ -1.84
USP48Q86UV5 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.58□□□□□ -1.84
USP48Q86UV5 RPL21P9-201ENST00000556149 474 ntBASIC3.58□□□□□ -1.84
USP48Q86UV5 MIR3910-1-201ENST00000580936 111 ntBASIC3.58□□□□□ -1.84
USP48Q86UV5 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.58□□□□□ -1.84
USP48Q86UV5 AC091932.3-201ENST00000624223 323 ntBASIC3.58□□□□□ -1.84
USP48Q86UV5 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
USP48Q86UV5 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
USP48Q86UV5 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.57□□□□□ -1.84
USP48Q86UV5 RNU6-944P-201ENST00000364023 107 ntBASIC3.57□□□□□ -1.84
USP48Q86UV5 RNA5SP504-201ENST00000410676 117 ntBASIC3.57□□□□□ -1.84
USP48Q86UV5 AC087499.2-201ENST00000432861 149 ntBASIC3.57□□□□□ -1.84
USP48Q86UV5 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.57□□□□□ -1.84
USP48Q86UV5 POLR2KP2-201ENST00000438155 177 ntBASIC3.57□□□□□ -1.84
USP48Q86UV5 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
USP48Q86UV5 COX6CP14-201ENST00000469580 174 ntBASIC3.57□□□□□ -1.84
USP48Q86UV5 AC023141.11-201ENST00000508864 202 ntBASIC3.57□□□□□ -1.84
USP48Q86UV5 RNU6-861P-201ENST00000516745 106 ntBASIC3.57□□□□□ -1.84
USP48Q86UV5 RNU6-1098P-201ENST00000516772 96 ntBASIC3.57□□□□□ -1.84
USP48Q86UV5 AC087441.2-201ENST00000529141 262 ntBASIC3.57□□□□□ -1.84
USP48Q86UV5 AC079600.2-201ENST00000550076 130 ntBASIC3.57□□□□□ -1.84
USP48Q86UV5 AL162424.1-201ENST00000602325 221 ntBASIC3.57□□□□□ -1.84
USP48Q86UV5 MIR5739-201ENST00000619803 80 ntBASIC3.57□□□□□ -1.84
USP48Q86UV5 AC008873.1-201ENST00000625051 138 ntBASIC3.57□□□□□ -1.84
USP48Q86UV5 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
USP48Q86UV5 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USP48Q86UV5 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
USP48Q86UV5 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.56□□□□□ -1.84
USP48Q86UV5 UBE2WP1-201ENST00000362030 340 ntBASIC3.56□□□□□ -1.84
USP48Q86UV5 SNORA51.4-201ENST00000364993 124 ntBASIC3.56□□□□□ -1.84
USP48Q86UV5 SNORA19-201ENST00000384737 128 ntBASIC3.56□□□□□ -1.84
USP48Q86UV5 MIR196B-201ENST00000384852 84 ntBASIC3.56□□□□□ -1.84
USP48Q86UV5 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.56□□□□□ -1.84
USP48Q86UV5 RN7SKP51-201ENST00000410781 304 ntBASIC3.56□□□□□ -1.84
USP48Q86UV5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.56□□□□□ -1.84
USP48Q86UV5 MTCO1P5-201ENST00000433573 344 ntBASIC3.56□□□□□ -1.84
USP48Q86UV5 Y_RNA.638-201ENST00000459374 113 ntBASIC3.56□□□□□ -1.84
USP48Q86UV5 AP004217.1-201ENST00000480579 346 ntBASIC3.56□□□□□ -1.84
USP48Q86UV5 AC091959.1-201ENST00000495857 238 ntBASIC3.56□□□□□ -1.84
USP48Q86UV5 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.56□□□□□ -1.84
USP48Q86UV5 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.56□□□□□ -1.84
USP48Q86UV5 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.56□□□□□ -1.84
USP48Q86UV5 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.56□□□□□ -1.84
USP48Q86UV5 Z82209.1-201ENST00000422141 2135 ntBASIC3.56□□□□□ -1.84
USP48Q86UV5 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
USP48Q86UV5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.55□□□□□ -1.84
USP48Q86UV5 SNORA25.1-201ENST00000362326 128 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 Y_RNA.82-201ENST00000363000 102 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 Y_RNA.92-201ENST00000363043 102 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 Y_RNA.101-201ENST00000363154 102 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 Y_RNA.136-201ENST00000363444 102 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 Y_RNA.235-201ENST00000364412 102 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 Y_RNA.306-201ENST00000365015 102 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 Y_RNA.312-201ENST00000365089 102 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 Y_RNA.322-201ENST00000365151 102 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 RNU6-514P-201ENST00000384208 107 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 SNORA67.2-201ENST00000384300 149 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 Y_RNA.506-201ENST00000384494 102 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 FO393413.1-201ENST00000402892 195 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 TOMM22P2-201ENST00000430735 237 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 RPL23AP58-201ENST00000440453 469 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 MRPS10P1-201ENST00000448483 130 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 NDUFB4P10-201ENST00000452541 359 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 SNORD109B-201ENST00000458961 67 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 Y_RNA.650-201ENST00000459002 102 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 SNORD109A-201ENST00000459128 67 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 RNU6-237P-201ENST00000515985 71 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 RNU1-41P-201ENST00000516161 162 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 RNU1-48P-201ENST00000516400 162 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 Y_RNA.777-201ENST00000516982 102 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 AP002001.1-203ENST00000534002 267 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 AC018630.3-201ENST00000542637 96 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 AC023043.3-201ENST00000593113 385 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 Y_RNA.771-201ENST00000598668 102 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 Y_RNA.789-201ENST00000622480 102 ntBASIC3.55□□□□□ -1.84
USP48Q86UV5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.55□□□□□ -1.84
USP48Q86UV5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
USP48Q86UV5 AC092593.1-201ENST00000515413 1815 ntBASIC3.54□□□□□ -1.84
USP48Q86UV5 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms