Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 PISRT1.1-201ENST00000616930 107 ntBASIC1.83□□□□□ -2.12
PRPF39Q86UA1 CASC19-280ENST00000642102 1351 ntBASIC1.83□□□□□ -2.12
PRPF39Q86UA1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.82□□□□□ -2.12
PRPF39Q86UA1 SNORA72.2-201ENST00000365028 127 ntBASIC1.82□□□□□ -2.12
PRPF39Q86UA1 MIR515-2-201ENST00000384883 83 ntBASIC1.82□□□□□ -2.12
PRPF39Q86UA1 MIR515-1-201ENST00000384884 83 ntBASIC1.82□□□□□ -2.12
PRPF39Q86UA1 RNU6-700P-201ENST00000391043 107 ntBASIC1.82□□□□□ -2.12
PRPF39Q86UA1 AL117342.1-201ENST00000404861 406 ntBASIC1.82□□□□□ -2.12
PRPF39Q86UA1 RNU6-1050P-201ENST00000410388 107 ntBASIC1.82□□□□□ -2.12
PRPF39Q86UA1 USP9YP16-201ENST00000430287 407 ntBASIC1.82□□□□□ -2.12
PRPF39Q86UA1 AC245047.4-201ENST00000433189 144 ntBASIC1.82□□□□□ -2.12
PRPF39Q86UA1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.82□□□□□ -2.12
PRPF39Q86UA1 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.82□□□□□ -2.12
PRPF39Q86UA1 FGF7P6-202ENST00000451282 293 ntBASIC1.82□□□□□ -2.12
PRPF39Q86UA1 USP9YP23-201ENST00000455085 407 ntBASIC1.82□□□□□ -2.12
PRPF39Q86UA1 AC103851.1-201ENST00000506833 274 ntBASIC1.82□□□□□ -2.12
PRPF39Q86UA1 RNA5SP481-201ENST00000516814 122 ntBASIC1.82□□□□□ -2.12
PRPF39Q86UA1 Y_RNA.708-201ENST00000516950 96 ntBASIC1.82□□□□□ -2.12
PRPF39Q86UA1 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.82□□□□□ -2.12
PRPF39Q86UA1 AP000942.3-201ENST00000603702 160 ntBASIC1.82□□□□□ -2.12
PRPF39Q86UA1 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
PRPF39Q86UA1 RNU6-1266P-201ENST00000362794 105 ntBASIC1.81□□□□□ -2.12
PRPF39Q86UA1 Y_RNA.160-201ENST00000363677 92 ntBASIC1.81□□□□□ -2.12
PRPF39Q86UA1 Y_RNA.415-201ENST00000384012 112 ntBASIC1.81□□□□□ -2.12
PRPF39Q86UA1 RNU6-767P-201ENST00000384132 107 ntBASIC1.81□□□□□ -2.12
PRPF39Q86UA1 MIR548B-201ENST00000385247 97 ntBASIC1.81□□□□□ -2.12
PRPF39Q86UA1 RNU6-876P-201ENST00000391295 104 ntBASIC1.81□□□□□ -2.12
PRPF39Q86UA1 Y_RNA.594-201ENST00000410373 140 ntBASIC1.81□□□□□ -2.12
PRPF39Q86UA1 RPL31P63-201ENST00000422565 375 ntBASIC1.81□□□□□ -2.12
PRPF39Q86UA1 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.81□□□□□ -2.12
PRPF39Q86UA1 MTND3P23-201ENST00000431980 347 ntBASIC1.81□□□□□ -2.12
PRPF39Q86UA1 FTH1P12-201ENST00000432137 551 ntBASIC1.81□□□□□ -2.12
PRPF39Q86UA1 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.81□□□□□ -2.12
PRPF39Q86UA1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.81□□□□□ -2.12
PRPF39Q86UA1 AC091179.3-201ENST00000474761 144 ntBASIC1.81□□□□□ -2.12
PRPF39Q86UA1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.81□□□□□ -2.12
PRPF39Q86UA1 AC026782.1-201ENST00000512952 449 ntBASIC1.81□□□□□ -2.12
PRPF39Q86UA1 AC046134.1-201ENST00000514454 666 ntBASIC1.81□□□□□ -2.12
PRPF39Q86UA1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.81□□□□□ -2.12
PRPF39Q86UA1 AC010999.1-201ENST00000611856 324 ntBASIC1.81□□□□□ -2.12
PRPF39Q86UA1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
PRPF39Q86UA1 U3.8-201ENST00000363675 217 ntBASIC1.8□□□□□ -2.12
PRPF39Q86UA1 RNU6-1240P-201ENST00000365155 104 ntBASIC1.8□□□□□ -2.12
PRPF39Q86UA1 RNA5SP190-201ENST00000365222 118 ntBASIC1.8□□□□□ -2.12
PRPF39Q86UA1 Y_RNA.505-201ENST00000384489 102 ntBASIC1.8□□□□□ -2.12
PRPF39Q86UA1 MIR934-201ENST00000401241 83 ntBASIC1.8□□□□□ -2.12
PRPF39Q86UA1 RNA5SP504-201ENST00000410676 117 ntBASIC1.8□□□□□ -2.12
PRPF39Q86UA1 RPL23AP50-201ENST00000434149 455 ntBASIC1.8□□□□□ -2.12
PRPF39Q86UA1 snoU13.9-201ENST00000458927 103 ntBASIC1.8□□□□□ -2.12
PRPF39Q86UA1 RNU7-87P-201ENST00000459343 62 ntBASIC1.8□□□□□ -2.12
PRPF39Q86UA1 RNU6-221P-201ENST00000459541 99 ntBASIC1.8□□□□□ -2.12
PRPF39Q86UA1 RNU6-107P-201ENST00000516643 102 ntBASIC1.8□□□□□ -2.12
PRPF39Q86UA1 RNU7-30P-201ENST00000516835 62 ntBASIC1.8□□□□□ -2.12
PRPF39Q86UA1 RNA5SP437-201ENST00000517249 129 ntBASIC1.8□□□□□ -2.12
PRPF39Q86UA1 HSBP1P1-201ENST00000555205 166 ntBASIC1.8□□□□□ -2.12
PRPF39Q86UA1 MIR3683-201ENST00000580847 82 ntBASIC1.8□□□□□ -2.12
PRPF39Q86UA1 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.8□□□□□ -2.12
PRPF39Q86UA1 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
PRPF39Q86UA1 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
PRPF39Q86UA1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
PRPF39Q86UA1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
PRPF39Q86UA1 RNU6-222P-201ENST00000362438 107 ntBASIC1.79□□□□□ -2.12
PRPF39Q86UA1 Y_RNA.106-201ENST00000363189 100 ntBASIC1.79□□□□□ -2.12
PRPF39Q86UA1 Y_RNA.248-201ENST00000364501 109 ntBASIC1.79□□□□□ -2.12
PRPF39Q86UA1 MIR10B-201ENST00000385011 110 ntBASIC1.79□□□□□ -2.12
PRPF39Q86UA1 AL353997.1-201ENST00000432936 108 ntBASIC1.79□□□□□ -2.12
PRPF39Q86UA1 RNU6-1114P-201ENST00000516022 107 ntBASIC1.79□□□□□ -2.12
PRPF39Q86UA1 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.79□□□□□ -2.12
PRPF39Q86UA1 RNU6-250P-201ENST00000516958 103 ntBASIC1.79□□□□□ -2.12
PRPF39Q86UA1 AC025647.1-201ENST00000517879 253 ntBASIC1.79□□□□□ -2.12
PRPF39Q86UA1 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.79□□□□□ -2.12
PRPF39Q86UA1 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.79□□□□□ -2.12
PRPF39Q86UA1 AC016925.2-201ENST00000605108 242 ntBASIC1.79□□□□□ -2.12
PRPF39Q86UA1 MIR502-201ENST00000606349 86 ntBASIC1.79□□□□□ -2.12
PRPF39Q86UA1 AC009229.3-201ENST00000608056 282 ntBASIC1.79□□□□□ -2.12
PRPF39Q86UA1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.79□□□□□ -2.12
PRPF39Q86UA1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.79□□□□□ -2.12
PRPF39Q86UA1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.79□□□□□ -2.12
PRPF39Q86UA1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
PRPF39Q86UA1 MIR126-201ENST00000362291 85 ntBASIC1.78□□□□□ -2.12
PRPF39Q86UA1 Y_RNA.482-201ENST00000384377 111 ntBASIC1.78□□□□□ -2.12
PRPF39Q86UA1 RNU6-360P-201ENST00000390944 104 ntBASIC1.78□□□□□ -2.12
PRPF39Q86UA1 AL627390.1-201ENST00000396055 340 ntBASIC1.78□□□□□ -2.12
PRPF39Q86UA1 COX6CP10-201ENST00000416832 224 ntBASIC1.78□□□□□ -2.12
PRPF39Q86UA1 AC073910.1-201ENST00000445047 438 ntBASIC1.78□□□□□ -2.12
PRPF39Q86UA1 AC005908.1-201ENST00000468701 347 ntBASIC1.78□□□□□ -2.12
PRPF39Q86UA1 AC027575.1-201ENST00000481064 460 ntBASIC1.78□□□□□ -2.12
PRPF39Q86UA1 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.78□□□□□ -2.12
PRPF39Q86UA1 AC093303.1-201ENST00000514549 295 ntBASIC1.78□□□□□ -2.12
PRPF39Q86UA1 Y_RNA.670-201ENST00000516255 105 ntBASIC1.78□□□□□ -2.12
PRPF39Q86UA1 AL121579.1-201ENST00000555129 305 ntBASIC1.78□□□□□ -2.12
PRPF39Q86UA1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.78□□□□□ -2.12
PRPF39Q86UA1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.78□□□□□ -2.12
PRPF39Q86UA1 MIR8081-201ENST00000611533 95 ntBASIC1.78□□□□□ -2.12
PRPF39Q86UA1 AC100821.1-201ENST00000523153 2479 ntBASIC1.78□□□□□ -2.12
PRPF39Q86UA1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
PRPF39Q86UA1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.13
PRPF39Q86UA1 MTND5P16-201ENST00000460269 1703 ntBASIC1.77□□□□□ -2.13
PRPF39Q86UA1 RNY1P16-201ENST00000363063 111 ntBASIC1.77□□□□□ -2.13
PRPF39Q86UA1 MIR190B-201ENST00000401119 79 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms