Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 RNU6-864P-201ENST00000516256 108 ntBASIC1.33□□□□□ -2.2
ATL3Q6DD88 RNU6-1088P-201ENST00000516850 104 ntBASIC1.33□□□□□ -2.2
ATL3Q6DD88 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.33□□□□□ -2.2
ATL3Q6DD88 MIR4742-201ENST00000581069 85 ntBASIC1.33□□□□□ -2.2
ATL3Q6DD88 POLR3GP2-201ENST00000588366 668 ntBASIC1.33□□□□□ -2.2
ATL3Q6DD88 AC019193.3-201ENST00000609144 554 ntBASIC1.33□□□□□ -2.2
ATL3Q6DD88 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
ATL3Q6DD88 AL121890.5-201ENST00000620848 304 ntBASIC1.33□□□□□ -2.2
ATL3Q6DD88 AC006504.8-201ENST00000621046 635 ntBASIC1.33□□□□□ -2.2
ATL3Q6DD88 AC008873.1-201ENST00000625051 138 ntBASIC1.33□□□□□ -2.2
ATL3Q6DD88 ICE2P2-201ENST00000483823 2787 ntBASIC1.33□□□□□ -2.2
ATL3Q6DD88 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.33□□□□□ -2.2
ATL3Q6DD88 RNU6-137P-201ENST00000363680 108 ntBASIC1.32□□□□□ -2.2
ATL3Q6DD88 RNU6-1305P-201ENST00000364353 104 ntBASIC1.32□□□□□ -2.2
ATL3Q6DD88 Y_RNA.287-201ENST00000364853 94 ntBASIC1.32□□□□□ -2.2
ATL3Q6DD88 RNU6-596P-201ENST00000365395 98 ntBASIC1.32□□□□□ -2.2
ATL3Q6DD88 RNU6-245P-201ENST00000384020 107 ntBASIC1.32□□□□□ -2.2
ATL3Q6DD88 RNU6-939P-201ENST00000384634 107 ntBASIC1.32□□□□□ -2.2
ATL3Q6DD88 MIR194-1-201ENST00000384892 85 ntBASIC1.32□□□□□ -2.2
ATL3Q6DD88 RNA5SP213-201ENST00000391031 106 ntBASIC1.32□□□□□ -2.2
ATL3Q6DD88 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.32□□□□□ -2.2
ATL3Q6DD88 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.32□□□□□ -2.2
ATL3Q6DD88 RNU7-57P-201ENST00000459540 60 ntBASIC1.32□□□□□ -2.2
ATL3Q6DD88 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.32□□□□□ -2.2
ATL3Q6DD88 RNU6-1314P-201ENST00000517139 104 ntBASIC1.32□□□□□ -2.2
ATL3Q6DD88 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.32□□□□□ -2.2
ATL3Q6DD88 RAB11AP2-201ENST00000545905 639 ntBASIC1.32□□□□□ -2.2
ATL3Q6DD88 AK6P2-201ENST00000549020 471 ntBASIC1.32□□□□□ -2.2
ATL3Q6DD88 AC027288.2-201ENST00000553028 243 ntBASIC1.32□□□□□ -2.2
ATL3Q6DD88 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.32□□□□□ -2.2
ATL3Q6DD88 AC124303.1-201ENST00000605703 360 ntBASIC1.32□□□□□ -2.2
ATL3Q6DD88 AC090517.2-201ENST00000614966 680 ntBASIC1.32□□□□□ -2.2
ATL3Q6DD88 AC009033.1-201ENST00000624279 431 ntBASIC1.32□□□□□ -2.2
ATL3Q6DD88 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
ATL3Q6DD88 Y_RNA.301-201ENST00000364990 103 ntBASIC1.31□□□□□ -2.2
ATL3Q6DD88 RNU6-17P-201ENST00000384245 107 ntBASIC1.31□□□□□ -2.2
ATL3Q6DD88 RNU6-18P-201ENST00000384527 107 ntBASIC1.31□□□□□ -2.2
ATL3Q6DD88 MIR32-201ENST00000384965 70 ntBASIC1.31□□□□□ -2.2
ATL3Q6DD88 MIR1285-1-201ENST00000408593 84 ntBASIC1.31□□□□□ -2.2
ATL3Q6DD88 AC016909.1-201ENST00000415916 166 ntBASIC1.31□□□□□ -2.2
ATL3Q6DD88 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.31□□□□□ -2.2
ATL3Q6DD88 HMGN2P34-201ENST00000437647 269 ntBASIC1.31□□□□□ -2.2
ATL3Q6DD88 RPL31P58-201ENST00000469001 379 ntBASIC1.31□□□□□ -2.2
ATL3Q6DD88 AC114982.1-201ENST00000469402 321 ntBASIC1.31□□□□□ -2.2
ATL3Q6DD88 TRMT112P2-201ENST00000512910 132 ntBASIC1.31□□□□□ -2.2
ATL3Q6DD88 RNU6-1198P-201ENST00000516904 67 ntBASIC1.31□□□□□ -2.2
ATL3Q6DD88 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.31□□□□□ -2.2
ATL3Q6DD88 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.31□□□□□ -2.2
ATL3Q6DD88 U4.5-201ENST00000617137 123 ntBASIC1.31□□□□□ -2.2
ATL3Q6DD88 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.31□□□□□ -2.2
ATL3Q6DD88 snoU2-30.2-201ENST00000362805 70 ntBASIC1.3□□□□□ -2.2
ATL3Q6DD88 SNORA33-201ENST00000363664 130 ntBASIC1.3□□□□□ -2.2
ATL3Q6DD88 SNORA7.1-201ENST00000363750 139 ntBASIC1.3□□□□□ -2.2
ATL3Q6DD88 SNORD1A-201ENST00000364968 72 ntBASIC1.3□□□□□ -2.2
ATL3Q6DD88 SNORA17.3-201ENST00000391159 129 ntBASIC1.3□□□□□ -2.2
ATL3Q6DD88 Z82205.1-201ENST00000428456 297 ntBASIC1.3□□□□□ -2.2
ATL3Q6DD88 AC009474.2-201ENST00000451383 136 ntBASIC1.3□□□□□ -2.2
ATL3Q6DD88 RNU6-221P-201ENST00000459541 99 ntBASIC1.3□□□□□ -2.2
ATL3Q6DD88 RPL30P10-201ENST00000488148 337 ntBASIC1.3□□□□□ -2.2
ATL3Q6DD88 AC079140.2-201ENST00000506193 142 ntBASIC1.3□□□□□ -2.2
ATL3Q6DD88 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.3□□□□□ -2.2
ATL3Q6DD88 AC025647.1-201ENST00000517879 253 ntBASIC1.3□□□□□ -2.2
ATL3Q6DD88 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.3□□□□□ -2.2
ATL3Q6DD88 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.3□□□□□ -2.2
ATL3Q6DD88 DNAJC19P9-201ENST00000555084 351 ntBASIC1.3□□□□□ -2.2
ATL3Q6DD88 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.3□□□□□ -2.2
ATL3Q6DD88 AP003465.2-201ENST00000602571 373 ntBASIC1.3□□□□□ -2.2
ATL3Q6DD88 MIR3688-2-201ENST00000636963 87 ntBASIC1.3□□□□□ -2.2
ATL3Q6DD88 U6.108-201ENST00000637764 58 ntBASIC1.3□□□□□ -2.2
ATL3Q6DD88 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
ATL3Q6DD88 SNORA72.2-201ENST00000365028 127 ntBASIC1.29□□□□□ -2.2
ATL3Q6DD88 MIR515-2-201ENST00000384883 83 ntBASIC1.29□□□□□ -2.2
ATL3Q6DD88 MIR515-1-201ENST00000384884 83 ntBASIC1.29□□□□□ -2.2
ATL3Q6DD88 MIR320B2-201ENST00000408479 138 ntBASIC1.29□□□□□ -2.2
ATL3Q6DD88 RNU4-62P-201ENST00000410125 130 ntBASIC1.29□□□□□ -2.2
ATL3Q6DD88 AC243428.1-201ENST00000421099 264 ntBASIC1.29□□□□□ -2.2
ATL3Q6DD88 AC027119.1-201ENST00000440877 241 ntBASIC1.29□□□□□ -2.2
ATL3Q6DD88 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.29□□□□□ -2.2
ATL3Q6DD88 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.29□□□□□ -2.2
ATL3Q6DD88 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.29□□□□□ -2.2
ATL3Q6DD88 RNU7-95P-201ENST00000459222 64 ntBASIC1.29□□□□□ -2.2
ATL3Q6DD88 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.29□□□□□ -2.2
ATL3Q6DD88 AC009248.2-201ENST00000619826 254 ntBASIC1.29□□□□□ -2.2
ATL3Q6DD88 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.29□□□□□ -2.2
ATL3Q6DD88 snoZ196.1-201ENST00000625269 89 ntBASIC1.29□□□□□ -2.2
ATL3Q6DD88 AC100821.1-201ENST00000523153 2479 ntBASIC1.28□□□□□ -2.2
ATL3Q6DD88 Y_RNA.157-201ENST00000363638 102 ntBASIC1.28□□□□□ -2.2
ATL3Q6DD88 Y_RNA.295-201ENST00000364918 102 ntBASIC1.28□□□□□ -2.2
ATL3Q6DD88 RNU4-12P-201ENST00000365233 139 ntBASIC1.28□□□□□ -2.2
ATL3Q6DD88 Y_RNA.508-201ENST00000384502 114 ntBASIC1.28□□□□□ -2.2
ATL3Q6DD88 MIR499A-201ENST00000384903 122 ntBASIC1.28□□□□□ -2.2
ATL3Q6DD88 MIR153-2-201ENST00000385225 87 ntBASIC1.28□□□□□ -2.2
ATL3Q6DD88 RNU6-159P-201ENST00000391080 106 ntBASIC1.28□□□□□ -2.2
ATL3Q6DD88 RNA5SP467-201ENST00000391274 118 ntBASIC1.28□□□□□ -2.2
ATL3Q6DD88 RNA5SP118-201ENST00000410385 109 ntBASIC1.28□□□□□ -2.2
ATL3Q6DD88 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.28□□□□□ -2.2
ATL3Q6DD88 AC073910.1-201ENST00000445047 438 ntBASIC1.28□□□□□ -2.2
ATL3Q6DD88 MTND1P17-201ENST00000448961 204 ntBASIC1.28□□□□□ -2.2
ATL3Q6DD88 NDUFB4P10-201ENST00000452541 359 ntBASIC1.28□□□□□ -2.2
ATL3Q6DD88 ACA59.1-201ENST00000515966 143 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms