Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 SNORD115-42-201ENST00000364273 82 ntBASIC-0.68□□□□□ -2.52
VPS13DQ5THJ4 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.68□□□□□ -2.52
VPS13DQ5THJ4 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.68□□□□□ -2.52
VPS13DQ5THJ4 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.68□□□□□ -2.52
VPS13DQ5THJ4 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.68□□□□□ -2.52
VPS13DQ5THJ4 MIR18B-201ENST00000454574 71 ntBASIC-0.68□□□□□ -2.52
VPS13DQ5THJ4 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.68□□□□□ -2.52
VPS13DQ5THJ4 RNU6-135P-201ENST00000516769 101 ntBASIC-0.68□□□□□ -2.52
VPS13DQ5THJ4 AC090897.1-201ENST00000580909 226 ntBASIC-0.68□□□□□ -2.52
VPS13DQ5THJ4 MIR4639-201ENST00000584938 69 ntBASIC-0.68□□□□□ -2.52
VPS13DQ5THJ4 AL136363.2-201ENST00000604173 851 ntBASIC-0.68□□□□□ -2.52
VPS13DQ5THJ4 RNU5E-8P-201ENST00000363502 116 ntBASIC-0.68□□□□□ -2.52
VPS13DQ5THJ4 RNU6-901P-201ENST00000384593 106 ntBASIC-0.68□□□□□ -2.52
VPS13DQ5THJ4 SNORA40C-201ENST00000391285 128 ntBASIC-0.68□□□□□ -2.52
VPS13DQ5THJ4 TMSB4XP8-201ENST00000402089 135 ntBASIC-0.68□□□□□ -2.52
VPS13DQ5THJ4 CDK8P2-201ENST00000415020 547 ntBASIC-0.68□□□□□ -2.52
VPS13DQ5THJ4 AL590135.1-201ENST00000422215 156 ntBASIC-0.68□□□□□ -2.52
VPS13DQ5THJ4 AC019205.3-201ENST00000424573 156 ntBASIC-0.68□□□□□ -2.52
VPS13DQ5THJ4 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.68□□□□□ -2.52
VPS13DQ5THJ4 AC016700.2-201ENST00000446011 156 ntBASIC-0.68□□□□□ -2.52
VPS13DQ5THJ4 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC-0.68□□□□□ -2.52
VPS13DQ5THJ4 AC015911.1-201ENST00000495111 156 ntBASIC-0.68□□□□□ -2.52
VPS13DQ5THJ4 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.68□□□□□ -2.52
VPS13DQ5THJ4 SNORA74.3-201ENST00000517108 154 ntBASIC-0.68□□□□□ -2.52
VPS13DQ5THJ4 AP003168.1-201ENST00000530091 307 ntBASIC-0.68□□□□□ -2.52
VPS13DQ5THJ4 AL590491.3-201ENST00000610731 82 ntBASIC-0.68□□□□□ -2.52
VPS13DQ5THJ4 SNORA2B-201ENST00000384583 137 ntBASIC-0.69□□□□□ -2.52
VPS13DQ5THJ4 MIR1302-7-201ENST00000408841 72 ntBASIC-0.69□□□□□ -2.52
VPS13DQ5THJ4 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC-0.69□□□□□ -2.52
VPS13DQ5THJ4 AC074290.1-201ENST00000448883 135 ntBASIC-0.69□□□□□ -2.52
VPS13DQ5THJ4 MTCO3P9-201ENST00000506989 781 ntBASIC-0.69□□□□□ -2.52
VPS13DQ5THJ4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-0.69□□□□□ -2.52
VPS13DQ5THJ4 AC008521.1-201ENST00000587471 187 ntBASIC-0.69□□□□□ -2.52
VPS13DQ5THJ4 RPL17P51-201ENST00000605218 238 ntBASIC-0.69□□□□□ -2.52
VPS13DQ5THJ4 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.69□□□□□ -2.52
VPS13DQ5THJ4 SNORA24.1-201ENST00000384401 135 ntBASIC-0.69□□□□□ -2.52
VPS13DQ5THJ4 AL353997.1-201ENST00000432936 108 ntBASIC-0.69□□□□□ -2.52
VPS13DQ5THJ4 MED28P2-201ENST00000475771 317 ntBASIC-0.69□□□□□ -2.52
VPS13DQ5THJ4 RPS23P5-201ENST00000495419 428 ntBASIC-0.69□□□□□ -2.52
VPS13DQ5THJ4 SCARNA4-201ENST00000629045 128 ntBASIC-0.69□□□□□ -2.52
VPS13DQ5THJ4 RNU4-21P-201ENST00000362802 126 ntBASIC-0.69□□□□□ -2.52
VPS13DQ5THJ4 SNORD41-201ENST00000386967 70 ntBASIC-0.69□□□□□ -2.52
VPS13DQ5THJ4 MIR501-201ENST00000390204 84 ntBASIC-0.69□□□□□ -2.52
VPS13DQ5THJ4 U8.16-201ENST00000391279 133 ntBASIC-0.69□□□□□ -2.52
VPS13DQ5THJ4 AC092104.1-201ENST00000497346 1441 ntBASIC-0.69□□□□□ -2.52
VPS13DQ5THJ4 AL139286.2-201ENST00000606838 396 ntBASIC-0.69□□□□□ -2.52
VPS13DQ5THJ4 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 SNORA67.2-201ENST00000384300 149 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 RNU6-31P-201ENST00000384388 108 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 SNORA12-201ENST00000391162 147 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 AC244250.2-201ENST00000418731 148 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 FO393419.3-201ENST00000428741 282 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 RNU6-732P-201ENST00000516033 103 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 MTND2P7-201ENST00000521337 640 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 RNU6-726P-201ENST00000364680 107 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 RNU6-934P-201ENST00000365154 107 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 MIR215-201ENST00000384858 110 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 AL606517.1-201ENST00000446914 387 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 AL392103.1-201ENST00000447000 198 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 MIR3179-1-201ENST00000578940 84 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 MIR3179-2-201ENST00000579107 84 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 MIR3179-3-201ENST00000579566 84 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 MIR3179-4-201ENST00000617599 84 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 MIR655-201ENST00000362159 97 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 RNU6-576P-201ENST00000390854 102 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.7□□□□□ -2.52
VPS13DQ5THJ4 MIR526A1-201ENST00000384897 85 ntBASIC-0.71□□□□□ -2.52
VPS13DQ5THJ4 MTND4P15-201ENST00000437913 1033 ntBASIC-0.71□□□□□ -2.52
VPS13DQ5THJ4 SNORD54-201ENST00000459159 67 ntBASIC-0.71□□□□□ -2.52
VPS13DQ5THJ4 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.71□□□□□ -2.52
VPS13DQ5THJ4 AC091959.1-201ENST00000495857 238 ntBASIC-0.71□□□□□ -2.52
VPS13DQ5THJ4 LAMTOR3P2-201ENST00000504479 232 ntBASIC-0.71□□□□□ -2.52
VPS13DQ5THJ4 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.71□□□□□ -2.52
VPS13DQ5THJ4 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.71□□□□□ -2.52
VPS13DQ5THJ4 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.71□□□□□ -2.52
VPS13DQ5THJ4 OR4H6P-202ENST00000603819 340 ntBASIC-0.71□□□□□ -2.52
VPS13DQ5THJ4 MIR6851-201ENST00000617060 67 ntBASIC-0.71□□□□□ -2.52
VPS13DQ5THJ4 AL136221.1-201ENST00000621449 509 ntBASIC-0.71□□□□□ -2.52
VPS13DQ5THJ4 SUMO1P2-201ENST00000452524 304 ntBASIC-0.71□□□□□ -2.52
VPS13DQ5THJ4 AP000870.1-201ENST00000472927 406 ntBASIC-0.71□□□□□ -2.52
VPS13DQ5THJ4 RNU2-34P-201ENST00000516534 121 ntBASIC-0.71□□□□□ -2.52
VPS13DQ5THJ4 MIR4753-201ENST00000585119 83 ntBASIC-0.71□□□□□ -2.52
VPS13DQ5THJ4 AC091135.1-201ENST00000585943 307 ntBASIC-0.71□□□□□ -2.52
VPS13DQ5THJ4 AC135803.1-201ENST00000608748 565 ntBASIC-0.71□□□□□ -2.52
VPS13DQ5THJ4 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.71□□□□□ -2.52
VPS13DQ5THJ4 RNU6-878P-201ENST00000384578 110 ntBASIC-0.71□□□□□ -2.52
VPS13DQ5THJ4 RNA5SP95-201ENST00000410319 137 ntBASIC-0.71□□□□□ -2.52
VPS13DQ5THJ4 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.71□□□□□ -2.52
VPS13DQ5THJ4 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms